Morphological kinetics and distribution in somatic embryo cultures
The environmental effects on developing somatic embryos should be characterized not only by the growth based on biomass, but also by the morphological properties and size. We have previously developed a discrete classifier to separate developing embryos into distinct morphological classes. In this s...
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Veröffentlicht in: | Biotechnology and bioengineering 1994-07, Vol.44 (3), p.368-378 |
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creator | Chi, Chung-Ming Vits, Hugo Staba, E. John Cooke, Todd J. Hu, Wei-Shou |
description | The environmental effects on developing somatic embryos should be characterized not only by the growth based on biomass, but also by the morphological properties and size. We have previously developed a discrete classifier to separate developing embryos into distinct morphological classes. In this study, a continuous descriptor using the distributions of magnitude of features representing morphological characteristics and size information was used to describe the developing embryo populations. The identity of the population was examined by comparing either the distributions of all features or key features. The method was applied to characterize the kinetics of carrot embryo populations cultivated in the presence and absence of triiodobenzoic acid(TIBA), an inhibitor of auxin polar transport. Optimal sample size for morphological characterization was determined by the invariance of feature distributions with further increase in sample size. The overall growth and substrate consumption kinetics were only slightly affected by the presence of TIBA. However, the distribution of morphological features was significantly affected. The features showing the highest statistical significance were related to those corresponding to the roughness. The continuous descriptor for characterizing developing embryo population is potentially useful for quality control in large‐scale operations. © 1994 John Wiley & Sons, Inc. |
doi_str_mv | 10.1002/bit.260440315 |
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John ; Cooke, Todd J. ; Hu, Wei-Shou</creator><creatorcontrib>Chi, Chung-Ming ; Vits, Hugo ; Staba, E. John ; Cooke, Todd J. ; Hu, Wei-Shou</creatorcontrib><description>The environmental effects on developing somatic embryos should be characterized not only by the growth based on biomass, but also by the morphological properties and size. We have previously developed a discrete classifier to separate developing embryos into distinct morphological classes. In this study, a continuous descriptor using the distributions of magnitude of features representing morphological characteristics and size information was used to describe the developing embryo populations. The identity of the population was examined by comparing either the distributions of all features or key features. The method was applied to characterize the kinetics of carrot embryo populations cultivated in the presence and absence of triiodobenzoic acid(TIBA), an inhibitor of auxin polar transport. Optimal sample size for morphological characterization was determined by the invariance of feature distributions with further increase in sample size. The overall growth and substrate consumption kinetics were only slightly affected by the presence of TIBA. However, the distribution of morphological features was significantly affected. The features showing the highest statistical significance were related to those corresponding to the roughness. 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John</creatorcontrib><creatorcontrib>Cooke, Todd J.</creatorcontrib><creatorcontrib>Hu, Wei-Shou</creatorcontrib><title>Morphological kinetics and distribution in somatic embryo cultures</title><title>Biotechnology and bioengineering</title><addtitle>Biotechnol. Bioeng</addtitle><description>The environmental effects on developing somatic embryos should be characterized not only by the growth based on biomass, but also by the morphological properties and size. We have previously developed a discrete classifier to separate developing embryos into distinct morphological classes. In this study, a continuous descriptor using the distributions of magnitude of features representing morphological characteristics and size information was used to describe the developing embryo populations. The identity of the population was examined by comparing either the distributions of all features or key features. The method was applied to characterize the kinetics of carrot embryo populations cultivated in the presence and absence of triiodobenzoic acid(TIBA), an inhibitor of auxin polar transport. Optimal sample size for morphological characterization was determined by the invariance of feature distributions with further increase in sample size. The overall growth and substrate consumption kinetics were only slightly affected by the presence of TIBA. However, the distribution of morphological features was significantly affected. The features showing the highest statistical significance were related to those corresponding to the roughness. The continuous descriptor for characterizing developing embryo population is potentially useful for quality control in large‐scale operations. © 1994 John Wiley & Sons, Inc.</description><subject>Biological and medical sciences</subject><subject>Biotechnology</subject><subject>Daucus carota L</subject><subject>embryos</subject><subject>Eukaryotic cell cultures</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>image analysis</subject><subject>In vitro embryo culture</subject><subject>kinetics</subject><subject>Methods. Procedures. Technologies</subject><subject>morphology</subject><subject>pattern recognition</subject><subject>Plant cells and fungal cells</subject><issn>0006-3592</issn><issn>1097-0290</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1994</creationdate><recordtype>article</recordtype><recordid>eNp90U1v1DAQBmALgehSOHJFOSA4pXj8MU6OtKJfaqGHrThajuOAaRJv7URl_z2uNlp66smy5vHM6DUh74EeAaXsS-OnI4ZUCMpBviAroLUqKavpS7KilGLJZc0OyJuU_uSrqhBfkwOoEColxYocX4e4-R368Mtb0xd3fnSTt6kwY1u0Pk3RN_Pkw1j4sUhhMLlYuKGJ21DYuZ_m6NJb8qozfXLvlvOQ3J5-W5-cl1c_zi5Ovl6VVigmS8mNbEQFtZRIGaJhnWusE4ajFWgUdy1DBp2TjZSGU2VbgxUoAdTU4Bg_JJ93fTcx3M8uTXrwybq-N6MLc9KKc0TGqirLT89KQAWM4SMsd9DGkFJ0nd5EP5i41UD1Y7w6x6v38Wb_YWk8N4Nr_-slzww-LsCknGcXzWh92jsBNeMAmakde_C92z4_VB9frJ9usGyc_8b93b808U6j4krqn9_PNL1k63N5w_Ul_wcNJqDH</recordid><startdate>199407</startdate><enddate>199407</enddate><creator>Chi, Chung-Ming</creator><creator>Vits, Hugo</creator><creator>Staba, E. 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John ; Cooke, Todd J. ; Hu, Wei-Shou</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4725-53a5b48195560266a2febce4a36c46a73ed2621fe5b55a307cda6817410a91e23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1994</creationdate><topic>Biological and medical sciences</topic><topic>Biotechnology</topic><topic>Daucus carota L</topic><topic>embryos</topic><topic>Eukaryotic cell cultures</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>image analysis</topic><topic>In vitro embryo culture</topic><topic>kinetics</topic><topic>Methods. Procedures. Technologies</topic><topic>morphology</topic><topic>pattern recognition</topic><topic>Plant cells and fungal cells</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chi, Chung-Ming</creatorcontrib><creatorcontrib>Vits, Hugo</creatorcontrib><creatorcontrib>Staba, E. John</creatorcontrib><creatorcontrib>Cooke, Todd J.</creatorcontrib><creatorcontrib>Hu, Wei-Shou</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biotechnology and bioengineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chi, Chung-Ming</au><au>Vits, Hugo</au><au>Staba, E. John</au><au>Cooke, Todd J.</au><au>Hu, Wei-Shou</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Morphological kinetics and distribution in somatic embryo cultures</atitle><jtitle>Biotechnology and bioengineering</jtitle><addtitle>Biotechnol. Bioeng</addtitle><date>1994-07</date><risdate>1994</risdate><volume>44</volume><issue>3</issue><spage>368</spage><epage>378</epage><pages>368-378</pages><issn>0006-3592</issn><eissn>1097-0290</eissn><coden>BIBIAU</coden><abstract>The environmental effects on developing somatic embryos should be characterized not only by the growth based on biomass, but also by the morphological properties and size. We have previously developed a discrete classifier to separate developing embryos into distinct morphological classes. In this study, a continuous descriptor using the distributions of magnitude of features representing morphological characteristics and size information was used to describe the developing embryo populations. The identity of the population was examined by comparing either the distributions of all features or key features. The method was applied to characterize the kinetics of carrot embryo populations cultivated in the presence and absence of triiodobenzoic acid(TIBA), an inhibitor of auxin polar transport. Optimal sample size for morphological characterization was determined by the invariance of feature distributions with further increase in sample size. The overall growth and substrate consumption kinetics were only slightly affected by the presence of TIBA. However, the distribution of morphological features was significantly affected. The features showing the highest statistical significance were related to those corresponding to the roughness. The continuous descriptor for characterizing developing embryo population is potentially useful for quality control in large‐scale operations. © 1994 John Wiley & Sons, Inc.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>18618754</pmid><doi>10.1002/bit.260440315</doi><tpages>11</tpages></addata></record> |
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subjects | Biological and medical sciences Biotechnology Daucus carota L embryos Eukaryotic cell cultures Fundamental and applied biological sciences. Psychology image analysis In vitro embryo culture kinetics Methods. Procedures. Technologies morphology pattern recognition Plant cells and fungal cells |
title | Morphological kinetics and distribution in somatic embryo cultures |
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