Transcriptional Control of a Plant Stem Cell Niche

Despite the independent evolution of multicellularity in plants and animals, the basic organization of their stem cell niches is remarkably similar. Here, we report the genome-wide regulatory potential of WUSCHEL, the key transcription factor for stem cell maintenance in the shoot apical meristem of...

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Veröffentlicht in:Developmental cell 2010-05, Vol.18 (5), p.841-853
Hauptverfasser: Busch, Wolfgang, Miotk, Andrej, Ariel, Federico D., Zhao, Zhong, Forner, Joachim, Daum, Gabor, Suzaki, Takuya, Schuster, Christoph, Schultheiss, Sebastian J., Leibfried, Andrea, Haubeiß, Silke, Ha, Nati, Chan, Raquel L., Lohmann, Jan U.
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container_end_page 853
container_issue 5
container_start_page 841
container_title Developmental cell
container_volume 18
creator Busch, Wolfgang
Miotk, Andrej
Ariel, Federico D.
Zhao, Zhong
Forner, Joachim
Daum, Gabor
Suzaki, Takuya
Schuster, Christoph
Schultheiss, Sebastian J.
Leibfried, Andrea
Haubeiß, Silke
Ha, Nati
Chan, Raquel L.
Lohmann, Jan U.
description Despite the independent evolution of multicellularity in plants and animals, the basic organization of their stem cell niches is remarkably similar. Here, we report the genome-wide regulatory potential of WUSCHEL, the key transcription factor for stem cell maintenance in the shoot apical meristem of the reference plant Arabidopsis thaliana. WUSCHEL acts by directly binding to at least two distinct DNA motifs in more than 100 target promoters and preferentially affects the expression of genes with roles in hormone signaling, metabolism, and development. Striking examples are the direct transcriptional repression of CLAVATA1, which is part of a negative feedback regulation of WUSCHEL, and the immediate regulation of transcriptional repressors of the TOPLESS family, which are involved in auxin signaling. Our results shed light on the complex transcriptional programs required for the maintenance of a dynamic and essential stem cell niche. [Display omitted] ► WUSCHEL (WUS) regulates genes with roles in metabolism, development, and signaling ► WUS binds to at least two diverse DNA motifs with different affinity ► WUS associates with more than 100 chromatin regions in vivo ► Direct WUS targets include key regulators, such as CLAVATA1 and TOPLESS
doi_str_mv 10.1016/j.devcel.2010.03.012
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Here, we report the genome-wide regulatory potential of WUSCHEL, the key transcription factor for stem cell maintenance in the shoot apical meristem of the reference plant Arabidopsis thaliana. WUSCHEL acts by directly binding to at least two distinct DNA motifs in more than 100 target promoters and preferentially affects the expression of genes with roles in hormone signaling, metabolism, and development. Striking examples are the direct transcriptional repression of CLAVATA1, which is part of a negative feedback regulation of WUSCHEL, and the immediate regulation of transcriptional repressors of the TOPLESS family, which are involved in auxin signaling. Our results shed light on the complex transcriptional programs required for the maintenance of a dynamic and essential stem cell niche. [Display omitted] ► WUSCHEL (WUS) regulates genes with roles in metabolism, development, and signaling ► WUS binds to at least two diverse DNA motifs with different affinity ► WUS associates with more than 100 chromatin regions in vivo ► Direct WUS targets include key regulators, such as CLAVATA1 and TOPLESS</description><identifier>ISSN: 1534-5807</identifier><identifier>EISSN: 1878-1551</identifier><identifier>DOI: 10.1016/j.devcel.2010.03.012</identifier><identifier>PMID: 20493817</identifier><language>eng</language><publisher>Cambridge, MA: Elsevier Inc</publisher><subject>Arabidopsis - genetics ; Arabidopsis - growth &amp; development ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - physiology ; Biological and medical sciences ; Cell differentiation, maturation, development, hematopoiesis ; Cell physiology ; Chromatin - genetics ; DEVBIO ; DNA-Binding Proteins - genetics ; Fundamental and applied biological sciences. Psychology ; Gene Expression Regulation, Plant ; Genome, Plant ; Genome-Wide Association Study ; Homeodomain Proteins - genetics ; Homeodomain Proteins - physiology ; Homeostasis ; Meristem - genetics ; Meristem - physiology ; Molecular and cellular biology ; Molecular genetics ; Plant Stems - physiology ; Protein-Serine-Threonine Kinases ; Receptor Protein-Tyrosine Kinases - genetics ; STEMCELL ; Transcription Factors - genetics ; Transcription, Genetic ; Transcription. Transcription factor. Splicing. Rna processing</subject><ispartof>Developmental cell, 2010-05, Vol.18 (5), p.841-853</ispartof><rights>2010 Elsevier Inc.</rights><rights>2015 INIST-CNRS</rights><rights>Copyright 2010 Elsevier Inc. 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subjects Arabidopsis - genetics
Arabidopsis - growth & development
Arabidopsis Proteins - genetics
Arabidopsis Proteins - physiology
Biological and medical sciences
Cell differentiation, maturation, development, hematopoiesis
Cell physiology
Chromatin - genetics
DEVBIO
DNA-Binding Proteins - genetics
Fundamental and applied biological sciences. Psychology
Gene Expression Regulation, Plant
Genome, Plant
Genome-Wide Association Study
Homeodomain Proteins - genetics
Homeodomain Proteins - physiology
Homeostasis
Meristem - genetics
Meristem - physiology
Molecular and cellular biology
Molecular genetics
Plant Stems - physiology
Protein-Serine-Threonine Kinases
Receptor Protein-Tyrosine Kinases - genetics
STEMCELL
Transcription Factors - genetics
Transcription, Genetic
Transcription. Transcription factor. Splicing. Rna processing
title Transcriptional Control of a Plant Stem Cell Niche
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