Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov

A thiosulfate-oxidizing facultative chemolithoautotrophic Burkholderia sp. strain ATSB13T was previously isolated from rhizosphere soil of tobacco plant. Strain ATSB13T was aerobic, Gram-staining-negative, rod shaped and motile by means of sub-terminal flagellum. Strain ATSB13T exhibited mixotrophic...

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Veröffentlicht in:Archives of microbiology 2009-12, Vol.191 (12), p.885-894
Hauptverfasser: Anandham, Rangasamy, Indira Gandhi, Pandiyan, Kwon, Soon Wo, Sa, Tong Min, Kim, Yong Ki, Jee, Hyeong Jin
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container_title Archives of microbiology
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creator Anandham, Rangasamy
Indira Gandhi, Pandiyan
Kwon, Soon Wo
Sa, Tong Min
Kim, Yong Ki
Jee, Hyeong Jin
description A thiosulfate-oxidizing facultative chemolithoautotrophic Burkholderia sp. strain ATSB13T was previously isolated from rhizosphere soil of tobacco plant. Strain ATSB13T was aerobic, Gram-staining-negative, rod shaped and motile by means of sub-terminal flagellum. Strain ATSB13T exhibited mixotrophic growth in a medium containing thiosulfate plus acetate. A phylogenetic study based on 16S rRNA gene sequence analysis indicated that strain ATSB13T was most closely related to Burkholderia kururiensis KP23T (98.7%), Burkholderia tuberum STM678T (96.5%) and Burkholderia phymatum STM815T (96.4%). Chemotaxonomic data [G+C 64.0 mol%, major fatty acids, C₁₈:₁ ω7c (28.22%), C₁₆:₁ ω7c/15 iso 2OH (15.15%), and C₁₆:₀ (14.91%) and Q-8 as predominant respiratory ubiquinone] supported the affiliation of the strain ATSB13T within the genus Burkholderia. Though the strain ATSB13T shared high 16S rRNA gene sequence similarity with the type strain of B. kururiensis but considerably distant from the latter in terms of several phenotypic and chemotaxonomic characteristics. DNA-DNA hybridization between strain ATSB13T and B. kururiensis KP23T was 100%, and hence, it is inferred that strain ATSB13T is a member of B. kururiensis. On the basis of data obtained from this study, we propose that B. kururiensis be subdivided into B. kururiensis subsp. kururiensis subsp. nov. (type strain KP23T = JCM 10599T = DSM 13646T) and B. kururiensis subsp. thiooxydans subsp. nov. (type strain ATSB13T = KACC 12758T).
doi_str_mv 10.1007/s00203-009-0517-4
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Strain ATSB13T was aerobic, Gram-staining-negative, rod shaped and motile by means of sub-terminal flagellum. Strain ATSB13T exhibited mixotrophic growth in a medium containing thiosulfate plus acetate. A phylogenetic study based on 16S rRNA gene sequence analysis indicated that strain ATSB13T was most closely related to Burkholderia kururiensis KP23T (98.7%), Burkholderia tuberum STM678T (96.5%) and Burkholderia phymatum STM815T (96.4%). Chemotaxonomic data [G+C 64.0 mol%, major fatty acids, C₁₈:₁ ω7c (28.22%), C₁₆:₁ ω7c/15 iso 2OH (15.15%), and C₁₆:₀ (14.91%) and Q-8 as predominant respiratory ubiquinone] supported the affiliation of the strain ATSB13T within the genus Burkholderia. Though the strain ATSB13T shared high 16S rRNA gene sequence similarity with the type strain of B. kururiensis but considerably distant from the latter in terms of several phenotypic and chemotaxonomic characteristics. DNA-DNA hybridization between strain ATSB13T and B. kururiensis KP23T was 100%, and hence, it is inferred that strain ATSB13T is a member of B. kururiensis. On the basis of data obtained from this study, we propose that B. kururiensis be subdivided into B. kururiensis subsp. kururiensis subsp. nov. (type strain KP23T = JCM 10599T = DSM 13646T) and B. kururiensis subsp. thiooxydans subsp. nov. (type strain ATSB13T = KACC 12758T).</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-009-0517-4</identifier><identifier>PMID: 19841903</identifier><identifier>CODEN: AMICCW</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>acetates ; Bacteria ; Bacteriology ; Biochemistry ; Biological and medical sciences ; Biomedical and Life Sciences ; Biotechnology ; Burkholderia - classification ; Burkholderia - genetics ; Burkholderia - growth &amp; development ; Burkholderia - metabolism ; Burkholderia kururiensis ; Cell Biology ; Chemoautotrophic Growth - physiology ; chemotaxonomy ; culture media ; Deoxyribonucleic acid ; DNA ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; Ecology ; fatty acids ; flagellum ; Fundamental and applied biological sciences. Psychology ; Life Sciences ; Metabolism ; Microbial Ecology ; Microbiology ; Miscellaneous ; new subspecies ; Nucleic Acid Hybridization ; nucleotide sequences ; Original Paper ; Oxidation ; Oxidation-Reduction ; Phenotype ; Phylogenetics ; Phylogeny ; Rhizosphere ; ribosomal RNA ; Rural development ; sequence homology ; soil ; Soil Microbiology ; Sulfur ; thiosulfates ; Thiosulfates - metabolism ; tobacco ; ubiquinones</subject><ispartof>Archives of microbiology, 2009-12, Vol.191 (12), p.885-894</ispartof><rights>Springer-Verlag 2009</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c490t-a2d09112196e6be710955a391d8f11e6444b62a14aa88ff6869726a0629e474c3</citedby><cites>FETCH-LOGICAL-c490t-a2d09112196e6be710955a391d8f11e6444b62a14aa88ff6869726a0629e474c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-009-0517-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-009-0517-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,778,782,27911,27912,41475,42544,51306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=22167435$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19841903$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Anandham, Rangasamy</creatorcontrib><creatorcontrib>Indira Gandhi, Pandiyan</creatorcontrib><creatorcontrib>Kwon, Soon Wo</creatorcontrib><creatorcontrib>Sa, Tong Min</creatorcontrib><creatorcontrib>Kim, Yong Ki</creatorcontrib><creatorcontrib>Jee, Hyeong Jin</creatorcontrib><title>Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>A thiosulfate-oxidizing facultative chemolithoautotrophic Burkholderia sp. strain ATSB13T was previously isolated from rhizosphere soil of tobacco plant. Strain ATSB13T was aerobic, Gram-staining-negative, rod shaped and motile by means of sub-terminal flagellum. Strain ATSB13T exhibited mixotrophic growth in a medium containing thiosulfate plus acetate. A phylogenetic study based on 16S rRNA gene sequence analysis indicated that strain ATSB13T was most closely related to Burkholderia kururiensis KP23T (98.7%), Burkholderia tuberum STM678T (96.5%) and Burkholderia phymatum STM815T (96.4%). Chemotaxonomic data [G+C 64.0 mol%, major fatty acids, C₁₈:₁ ω7c (28.22%), C₁₆:₁ ω7c/15 iso 2OH (15.15%), and C₁₆:₀ (14.91%) and Q-8 as predominant respiratory ubiquinone] supported the affiliation of the strain ATSB13T within the genus Burkholderia. Though the strain ATSB13T shared high 16S rRNA gene sequence similarity with the type strain of B. kururiensis but considerably distant from the latter in terms of several phenotypic and chemotaxonomic characteristics. DNA-DNA hybridization between strain ATSB13T and B. kururiensis KP23T was 100%, and hence, it is inferred that strain ATSB13T is a member of B. kururiensis. On the basis of data obtained from this study, we propose that B. kururiensis be subdivided into B. kururiensis subsp. kururiensis subsp. nov. (type strain KP23T = JCM 10599T = DSM 13646T) and B. kururiensis subsp. thiooxydans subsp. nov. (type strain ATSB13T = KACC 12758T).</description><subject>acetates</subject><subject>Bacteria</subject><subject>Bacteriology</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Burkholderia - classification</subject><subject>Burkholderia - genetics</subject><subject>Burkholderia - growth &amp; development</subject><subject>Burkholderia - metabolism</subject><subject>Burkholderia kururiensis</subject><subject>Cell Biology</subject><subject>Chemoautotrophic Growth - physiology</subject><subject>chemotaxonomy</subject><subject>culture media</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Ecology</subject><subject>fatty acids</subject><subject>flagellum</subject><subject>Fundamental and applied biological sciences. 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Psychology</topic><topic>Life Sciences</topic><topic>Metabolism</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>new subspecies</topic><topic>Nucleic Acid Hybridization</topic><topic>nucleotide sequences</topic><topic>Original Paper</topic><topic>Oxidation</topic><topic>Oxidation-Reduction</topic><topic>Phenotype</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Rhizosphere</topic><topic>ribosomal RNA</topic><topic>Rural development</topic><topic>sequence homology</topic><topic>soil</topic><topic>Soil Microbiology</topic><topic>Sulfur</topic><topic>thiosulfates</topic><topic>Thiosulfates - metabolism</topic><topic>tobacco</topic><topic>ubiquinones</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Anandham, Rangasamy</creatorcontrib><creatorcontrib>Indira Gandhi, Pandiyan</creatorcontrib><creatorcontrib>Kwon, Soon Wo</creatorcontrib><creatorcontrib>Sa, Tong Min</creatorcontrib><creatorcontrib>Kim, Yong Ki</creatorcontrib><creatorcontrib>Jee, Hyeong Jin</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Anandham, Rangasamy</au><au>Indira Gandhi, Pandiyan</au><au>Kwon, Soon Wo</au><au>Sa, Tong Min</au><au>Kim, Yong Ki</au><au>Jee, Hyeong Jin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2009-12-01</date><risdate>2009</risdate><volume>191</volume><issue>12</issue><spage>885</spage><epage>894</epage><pages>885-894</pages><issn>0302-8933</issn><eissn>1432-072X</eissn><coden>AMICCW</coden><abstract>A thiosulfate-oxidizing facultative chemolithoautotrophic Burkholderia sp. strain ATSB13T was previously isolated from rhizosphere soil of tobacco plant. Strain ATSB13T was aerobic, Gram-staining-negative, rod shaped and motile by means of sub-terminal flagellum. Strain ATSB13T exhibited mixotrophic growth in a medium containing thiosulfate plus acetate. A phylogenetic study based on 16S rRNA gene sequence analysis indicated that strain ATSB13T was most closely related to Burkholderia kururiensis KP23T (98.7%), Burkholderia tuberum STM678T (96.5%) and Burkholderia phymatum STM815T (96.4%). Chemotaxonomic data [G+C 64.0 mol%, major fatty acids, C₁₈:₁ ω7c (28.22%), C₁₆:₁ ω7c/15 iso 2OH (15.15%), and C₁₆:₀ (14.91%) and Q-8 as predominant respiratory ubiquinone] supported the affiliation of the strain ATSB13T within the genus Burkholderia. Though the strain ATSB13T shared high 16S rRNA gene sequence similarity with the type strain of B. kururiensis but considerably distant from the latter in terms of several phenotypic and chemotaxonomic characteristics. DNA-DNA hybridization between strain ATSB13T and B. kururiensis KP23T was 100%, and hence, it is inferred that strain ATSB13T is a member of B. kururiensis. On the basis of data obtained from this study, we propose that B. kururiensis be subdivided into B. kururiensis subsp. kururiensis subsp. nov. (type strain KP23T = JCM 10599T = DSM 13646T) and B. kururiensis subsp. thiooxydans subsp. nov. (type strain ATSB13T = KACC 12758T).</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>19841903</pmid><doi>10.1007/s00203-009-0517-4</doi><tpages>10</tpages></addata></record>
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1432-072X
language eng
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subjects acetates
Bacteria
Bacteriology
Biochemistry
Biological and medical sciences
Biomedical and Life Sciences
Biotechnology
Burkholderia - classification
Burkholderia - genetics
Burkholderia - growth & development
Burkholderia - metabolism
Burkholderia kururiensis
Cell Biology
Chemoautotrophic Growth - physiology
chemotaxonomy
culture media
Deoxyribonucleic acid
DNA
DNA, Bacterial - chemistry
DNA, Bacterial - genetics
Ecology
fatty acids
flagellum
Fundamental and applied biological sciences. Psychology
Life Sciences
Metabolism
Microbial Ecology
Microbiology
Miscellaneous
new subspecies
Nucleic Acid Hybridization
nucleotide sequences
Original Paper
Oxidation
Oxidation-Reduction
Phenotype
Phylogenetics
Phylogeny
Rhizosphere
ribosomal RNA
Rural development
sequence homology
soil
Soil Microbiology
Sulfur
thiosulfates
Thiosulfates - metabolism
tobacco
ubiquinones
title Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov
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