Protein-Inorganic Array Construction: Design and Synthesis of the Building Blocks

Herein we describe the design and synthesis of the first series of di‐functional ligands for the directed construction of inorganic‐protein frameworks. The synthesized ligands are composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide, known to covalently b...

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Veröffentlicht in:Chemistry : a European journal 2010-02, Vol.16 (7), p.2170-2180
Hauptverfasser: Bogdan, Niculina D., Matache, Mihaela, Meier, Veronika M., Dobrotă, Cristian, Dumitru, Ioana, Roiban, Gheorghe D., Funeriu, Daniel P.
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container_issue 7
container_start_page 2170
container_title Chemistry : a European journal
container_volume 16
creator Bogdan, Niculina D.
Matache, Mihaela
Meier, Veronika M.
Dobrotă, Cristian
Dumitru, Ioana
Roiban, Gheorghe D.
Funeriu, Daniel P.
description Herein we describe the design and synthesis of the first series of di‐functional ligands for the directed construction of inorganic‐protein frameworks. The synthesized ligands are composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide, known to covalently bind active cysteine proteases through the active‐site cysteine. We explore and optimize two different conjugation chemistries between the di‐functionalized metal‐ion ligand and the epoxysuccinyl‐containing peptide moiety: peptide‐bond formation (with limited success) and CuI‐catalysed click chemistry (with good results). Further, the complexation of the synthesized ligands with FeII and NiII ions is investigated: the di‐functional ligands are confirmed to behave similarly to the parent terpyridine. As designed, the peptidic moiety does not interfere with the complexation reaction, in spite of the presence of two triazole rings that result from the click reaction. ES‐MS together with NMR and UV/Vis studies establish the structure, the stoichiometry of the complexation reactions, as well as the conditions under which chemically sensitive peptide‐containing polypyridine ligands can undergo the self‐assembly process. These results establish the versatility of our approach and open the way to the synthesis of di‐functional ligands containing more elaborated polypyridine ligands as well as affinity labels for different enzyme families. As such, this paper is the first step towards the construction of robust supramolecular species that cover a size‐regime and organization level previously unexplored. Im Folgenden beschreiben wir das gezielte Design und die Synthese di‐funktionaler Liganden zum erstmaligen Aufbau supramolekularer Metall‐Protein‐Hybridarchitekturen. Die synthetisierten Liganden enthalten eine Metallionen‐Bindungsstelle (auf Terpyridin‐Basis), die mit einem Epoxysuccinyl‐Peptid konjugiert wurde. Diese Peptide binden bekannterweise an die aktiven Cysteine im katalytischen Zentrum von Cystein‐Proteasen. Wir untersuchen und optimieren zwei verschiedene Arten chemischer Konjugations‐Systeme zwischen den di‐funktionalen Metallionen‐Liganden und dem Epoxysuccinyl‐enthaltenden Peptidrest: Bildung einer Peptid‐Bindung (mit geringem Erfolg) und CuI‐katalysierte click Chemie (mit signifikantem Erfolg). Wie beabsichtigt, erfolgt die Komplexierung von FeII‐ und NiII‐Ionen an den synthetisierten Liganden hochselektiv am Terpyridylrest und nicht an den Triazol‐Ringen d
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The synthesized ligands are composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide, known to covalently bind active cysteine proteases through the active‐site cysteine. We explore and optimize two different conjugation chemistries between the di‐functionalized metal‐ion ligand and the epoxysuccinyl‐containing peptide moiety: peptide‐bond formation (with limited success) and CuI‐catalysed click chemistry (with good results). Further, the complexation of the synthesized ligands with FeII and NiII ions is investigated: the di‐functional ligands are confirmed to behave similarly to the parent terpyridine. As designed, the peptidic moiety does not interfere with the complexation reaction, in spite of the presence of two triazole rings that result from the click reaction. ES‐MS together with NMR and UV/Vis studies establish the structure, the stoichiometry of the complexation reactions, as well as the conditions under which chemically sensitive peptide‐containing polypyridine ligands can undergo the self‐assembly process. These results establish the versatility of our approach and open the way to the synthesis of di‐functional ligands containing more elaborated polypyridine ligands as well as affinity labels for different enzyme families. As such, this paper is the first step towards the construction of robust supramolecular species that cover a size‐regime and organization level previously unexplored. Im Folgenden beschreiben wir das gezielte Design und die Synthese di‐funktionaler Liganden zum erstmaligen Aufbau supramolekularer Metall‐Protein‐Hybridarchitekturen. Die synthetisierten Liganden enthalten eine Metallionen‐Bindungsstelle (auf Terpyridin‐Basis), die mit einem Epoxysuccinyl‐Peptid konjugiert wurde. Diese Peptide binden bekannterweise an die aktiven Cysteine im katalytischen Zentrum von Cystein‐Proteasen. Wir untersuchen und optimieren zwei verschiedene Arten chemischer Konjugations‐Systeme zwischen den di‐funktionalen Metallionen‐Liganden und dem Epoxysuccinyl‐enthaltenden Peptidrest: Bildung einer Peptid‐Bindung (mit geringem Erfolg) und CuI‐katalysierte click Chemie (mit signifikantem Erfolg). Wie beabsichtigt, erfolgt die Komplexierung von FeII‐ und NiII‐Ionen an den synthetisierten Liganden hochselektiv am Terpyridylrest und nicht an den Triazol‐Ringen des Peptidrests, die aus der click Reaktion resultieren. Struktur, Stöchiometrie der Komplexbildung und Bedingungen für den Selbstorganisationsprozess der empfindlichen poly‐Pyridyl‐Peptid‐Liganden wurden durch ESI‐MS‐, NMR‐ und UV‐VIS‐Untersuchungen dokumentiert. Diese Ergebnisse demonstrieren die Vielseitigkeit unseres neuartigen Ansatzes zur Synthese maßgeschneiderter di‐funktionaler Liganden mit poly‐Pyridyl‐Resten und Affinity Label für unterschiedliche Enzymfamilien. Die Arbeit repräsentiert somit den ersten Schritt in der Entwicklung einer stabilen, supramolekularen Architektur in bisher unerreichter Größenordnung und Organisationsgrad. One step beyond—expanding the size and complexity of supramolecular constructs: We describe the design and synthesis of the first series of di‐functional ligands for the directed construction of inorganic–protein frameworks (see scheme). Composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide (known to covalently bind active cysteine proteases), the ligands are best synthesized through a click‐chemistry approach.</description><identifier>ISSN: 0947-6539</identifier><identifier>EISSN: 1521-3765</identifier><identifier>DOI: 10.1002/chem.200902649</identifier><identifier>PMID: 20063328</identifier><identifier>CODEN: CEUJED</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Arrays ; Binding Sites ; Catalysis ; Chemistry ; click chemistry ; Complexation ; Construction ; Cysteine ; inorganic-protein frameworks ; Ligands ; Metalloproteins - chemistry ; Metals - chemistry ; Molecular Structure ; Nuclear Magnetic Resonance, Biomolecular ; Peptides ; Peptides - chemistry ; Protein Array Analysis ; Protein Conformation ; Proteins - chemistry ; Pyridines - chemistry ; Self assembly ; Synthesis ; terpyridines</subject><ispartof>Chemistry : a European journal, 2010-02, Vol.16 (7), p.2170-2180</ispartof><rights>Copyright © 2010 WILEY‐VCH Verlag GmbH &amp; Co. 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The synthesized ligands are composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide, known to covalently bind active cysteine proteases through the active‐site cysteine. We explore and optimize two different conjugation chemistries between the di‐functionalized metal‐ion ligand and the epoxysuccinyl‐containing peptide moiety: peptide‐bond formation (with limited success) and CuI‐catalysed click chemistry (with good results). Further, the complexation of the synthesized ligands with FeII and NiII ions is investigated: the di‐functional ligands are confirmed to behave similarly to the parent terpyridine. As designed, the peptidic moiety does not interfere with the complexation reaction, in spite of the presence of two triazole rings that result from the click reaction. ES‐MS together with NMR and UV/Vis studies establish the structure, the stoichiometry of the complexation reactions, as well as the conditions under which chemically sensitive peptide‐containing polypyridine ligands can undergo the self‐assembly process. These results establish the versatility of our approach and open the way to the synthesis of di‐functional ligands containing more elaborated polypyridine ligands as well as affinity labels for different enzyme families. As such, this paper is the first step towards the construction of robust supramolecular species that cover a size‐regime and organization level previously unexplored. Im Folgenden beschreiben wir das gezielte Design und die Synthese di‐funktionaler Liganden zum erstmaligen Aufbau supramolekularer Metall‐Protein‐Hybridarchitekturen. Die synthetisierten Liganden enthalten eine Metallionen‐Bindungsstelle (auf Terpyridin‐Basis), die mit einem Epoxysuccinyl‐Peptid konjugiert wurde. Diese Peptide binden bekannterweise an die aktiven Cysteine im katalytischen Zentrum von Cystein‐Proteasen. Wir untersuchen und optimieren zwei verschiedene Arten chemischer Konjugations‐Systeme zwischen den di‐funktionalen Metallionen‐Liganden und dem Epoxysuccinyl‐enthaltenden Peptidrest: Bildung einer Peptid‐Bindung (mit geringem Erfolg) und CuI‐katalysierte click Chemie (mit signifikantem Erfolg). Wie beabsichtigt, erfolgt die Komplexierung von FeII‐ und NiII‐Ionen an den synthetisierten Liganden hochselektiv am Terpyridylrest und nicht an den Triazol‐Ringen des Peptidrests, die aus der click Reaktion resultieren. Struktur, Stöchiometrie der Komplexbildung und Bedingungen für den Selbstorganisationsprozess der empfindlichen poly‐Pyridyl‐Peptid‐Liganden wurden durch ESI‐MS‐, NMR‐ und UV‐VIS‐Untersuchungen dokumentiert. Diese Ergebnisse demonstrieren die Vielseitigkeit unseres neuartigen Ansatzes zur Synthese maßgeschneiderter di‐funktionaler Liganden mit poly‐Pyridyl‐Resten und Affinity Label für unterschiedliche Enzymfamilien. Die Arbeit repräsentiert somit den ersten Schritt in der Entwicklung einer stabilen, supramolekularen Architektur in bisher unerreichter Größenordnung und Organisationsgrad. One step beyond—expanding the size and complexity of supramolecular constructs: We describe the design and synthesis of the first series of di‐functional ligands for the directed construction of inorganic–protein frameworks (see scheme). 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The synthesized ligands are composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide, known to covalently bind active cysteine proteases through the active‐site cysteine. We explore and optimize two different conjugation chemistries between the di‐functionalized metal‐ion ligand and the epoxysuccinyl‐containing peptide moiety: peptide‐bond formation (with limited success) and CuI‐catalysed click chemistry (with good results). Further, the complexation of the synthesized ligands with FeII and NiII ions is investigated: the di‐functional ligands are confirmed to behave similarly to the parent terpyridine. As designed, the peptidic moiety does not interfere with the complexation reaction, in spite of the presence of two triazole rings that result from the click reaction. ES‐MS together with NMR and UV/Vis studies establish the structure, the stoichiometry of the complexation reactions, as well as the conditions under which chemically sensitive peptide‐containing polypyridine ligands can undergo the self‐assembly process. These results establish the versatility of our approach and open the way to the synthesis of di‐functional ligands containing more elaborated polypyridine ligands as well as affinity labels for different enzyme families. As such, this paper is the first step towards the construction of robust supramolecular species that cover a size‐regime and organization level previously unexplored. Im Folgenden beschreiben wir das gezielte Design und die Synthese di‐funktionaler Liganden zum erstmaligen Aufbau supramolekularer Metall‐Protein‐Hybridarchitekturen. Die synthetisierten Liganden enthalten eine Metallionen‐Bindungsstelle (auf Terpyridin‐Basis), die mit einem Epoxysuccinyl‐Peptid konjugiert wurde. Diese Peptide binden bekannterweise an die aktiven Cysteine im katalytischen Zentrum von Cystein‐Proteasen. Wir untersuchen und optimieren zwei verschiedene Arten chemischer Konjugations‐Systeme zwischen den di‐funktionalen Metallionen‐Liganden und dem Epoxysuccinyl‐enthaltenden Peptidrest: Bildung einer Peptid‐Bindung (mit geringem Erfolg) und CuI‐katalysierte click Chemie (mit signifikantem Erfolg). Wie beabsichtigt, erfolgt die Komplexierung von FeII‐ und NiII‐Ionen an den synthetisierten Liganden hochselektiv am Terpyridylrest und nicht an den Triazol‐Ringen des Peptidrests, die aus der click Reaktion resultieren. Struktur, Stöchiometrie der Komplexbildung und Bedingungen für den Selbstorganisationsprozess der empfindlichen poly‐Pyridyl‐Peptid‐Liganden wurden durch ESI‐MS‐, NMR‐ und UV‐VIS‐Untersuchungen dokumentiert. Diese Ergebnisse demonstrieren die Vielseitigkeit unseres neuartigen Ansatzes zur Synthese maßgeschneiderter di‐funktionaler Liganden mit poly‐Pyridyl‐Resten und Affinity Label für unterschiedliche Enzymfamilien. Die Arbeit repräsentiert somit den ersten Schritt in der Entwicklung einer stabilen, supramolekularen Architektur in bisher unerreichter Größenordnung und Organisationsgrad. One step beyond—expanding the size and complexity of supramolecular constructs: We describe the design and synthesis of the first series of di‐functional ligands for the directed construction of inorganic–protein frameworks (see scheme). Composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide (known to covalently bind active cysteine proteases), the ligands are best synthesized through a click‐chemistry approach.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>20063328</pmid><doi>10.1002/chem.200902649</doi><tpages>11</tpages></addata></record>
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subjects Arrays
Binding Sites
Catalysis
Chemistry
click chemistry
Complexation
Construction
Cysteine
inorganic-protein frameworks
Ligands
Metalloproteins - chemistry
Metals - chemistry
Molecular Structure
Nuclear Magnetic Resonance, Biomolecular
Peptides
Peptides - chemistry
Protein Array Analysis
Protein Conformation
Proteins - chemistry
Pyridines - chemistry
Self assembly
Synthesis
terpyridines
title Protein-Inorganic Array Construction: Design and Synthesis of the Building Blocks
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