Influence of Ionic Strength, Actin State, and Caldesmon Construct Size on the Number of Actin Monomers in a Caldesmon Binding Site
There is no consensus on the mechanism of inhibition of actin−myosin ATPase activity by caldesmon. Various models are based on different assumptions for the number of actin monomers that constitute a caldesmon binding site. Differences in binding behavior may be due to variations in the assay, the r...
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Veröffentlicht in: | Biochemistry (Easton) 2003-05, Vol.42 (20), p.6136-6148 |
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description | There is no consensus on the mechanism of inhibition of actin−myosin ATPase activity by caldesmon. Various models are based on different assumptions for the number of actin monomers that constitute a caldesmon binding site. Differences in binding behavior may be due to variations in the assay, the range of caldesmon concentrations, the type of caldesmon, and the method of data analysis used. We have evaluated these factors by measuring binding in the presence and absence of tropomyosin with both intact caldesmon and a recombinant 35 kDa actin binding fragment and with actin initially in the polymerized state or monomeric state. In all cases caldesmon binding could be simulated with a model having one class of binding sites. However, the number of actin monomers constituting a site was variable. Binding to F-actin at 165 mM ionic strength was best described with 7 actin monomers per site. When caldesmon bound to actin during the polymerization of G-actin, the size of the binding site was 3. Binding of the expressed truncated fragment, Cad35, could be described with 3 monomers per site. A simple interpretation of the data is that caldesmon binds tightly to 2−3 actin monomers. Additional parts of caldesmon bind less tightly to actin, causing caldesmon to cover approximately 7 actin monomers. The appendix contains an analysis of several binding curves with multiple binding site models. There is no compelling evidence for two classes of binding sites. |
doi_str_mv | 10.1021/bi0274017 |
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Various models are based on different assumptions for the number of actin monomers that constitute a caldesmon binding site. Differences in binding behavior may be due to variations in the assay, the range of caldesmon concentrations, the type of caldesmon, and the method of data analysis used. We have evaluated these factors by measuring binding in the presence and absence of tropomyosin with both intact caldesmon and a recombinant 35 kDa actin binding fragment and with actin initially in the polymerized state or monomeric state. In all cases caldesmon binding could be simulated with a model having one class of binding sites. However, the number of actin monomers constituting a site was variable. Binding to F-actin at 165 mM ionic strength was best described with 7 actin monomers per site. When caldesmon bound to actin during the polymerization of G-actin, the size of the binding site was 3. Binding of the expressed truncated fragment, Cad35, could be described with 3 monomers per site. A simple interpretation of the data is that caldesmon binds tightly to 2−3 actin monomers. Additional parts of caldesmon bind less tightly to actin, causing caldesmon to cover approximately 7 actin monomers. The appendix contains an analysis of several binding curves with multiple binding site models. There is no compelling evidence for two classes of binding sites.</description><identifier>ISSN: 0006-2960</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/bi0274017</identifier><identifier>PMID: 12755616</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Actins - chemistry ; Actins - metabolism ; Adenosine Triphosphate - metabolism ; Animals ; Binding Sites ; Biopolymers - chemistry ; Biopolymers - metabolism ; Calmodulin-Binding Proteins - chemistry ; Calmodulin-Binding Proteins - genetics ; Calmodulin-Binding Proteins - metabolism ; Chickens ; In Vitro Techniques ; Models, Biological ; Myosins - antagonists & inhibitors ; Osmolar Concentration ; Peptide Fragments - chemistry ; Peptide Fragments - genetics ; Peptide Fragments - metabolism ; Protein Binding ; Rabbits ; Recombinant Proteins - chemistry ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; Tropomyosin - metabolism ; Troponin - metabolism ; Turkeys</subject><ispartof>Biochemistry (Easton), 2003-05, Vol.42 (20), p.6136-6148</ispartof><rights>Copyright © 2003 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a349t-5808d570e1766cb1d8de9d27e5af387a76989374bf0790ccf48a0e8c37525e263</citedby><cites>FETCH-LOGICAL-a349t-5808d570e1766cb1d8de9d27e5af387a76989374bf0790ccf48a0e8c37525e263</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/bi0274017$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/bi0274017$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,776,780,2752,27053,27901,27902,56713,56763</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12755616$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fredricksen, Scott</creatorcontrib><creatorcontrib>Cai, Anmei</creatorcontrib><creatorcontrib>Gafurov, Boris</creatorcontrib><creatorcontrib>Resetar, Andrea</creatorcontrib><creatorcontrib>Chalovich, Joseph M.</creatorcontrib><title>Influence of Ionic Strength, Actin State, and Caldesmon Construct Size on the Number of Actin Monomers in a Caldesmon Binding Site</title><title>Biochemistry (Easton)</title><addtitle>Biochemistry</addtitle><description>There is no consensus on the mechanism of inhibition of actin−myosin ATPase activity by caldesmon. Various models are based on different assumptions for the number of actin monomers that constitute a caldesmon binding site. Differences in binding behavior may be due to variations in the assay, the range of caldesmon concentrations, the type of caldesmon, and the method of data analysis used. We have evaluated these factors by measuring binding in the presence and absence of tropomyosin with both intact caldesmon and a recombinant 35 kDa actin binding fragment and with actin initially in the polymerized state or monomeric state. In all cases caldesmon binding could be simulated with a model having one class of binding sites. However, the number of actin monomers constituting a site was variable. Binding to F-actin at 165 mM ionic strength was best described with 7 actin monomers per site. When caldesmon bound to actin during the polymerization of G-actin, the size of the binding site was 3. Binding of the expressed truncated fragment, Cad35, could be described with 3 monomers per site. A simple interpretation of the data is that caldesmon binds tightly to 2−3 actin monomers. Additional parts of caldesmon bind less tightly to actin, causing caldesmon to cover approximately 7 actin monomers. The appendix contains an analysis of several binding curves with multiple binding site models. There is no compelling evidence for two classes of binding sites.</description><subject>Actins - chemistry</subject><subject>Actins - metabolism</subject><subject>Adenosine Triphosphate - metabolism</subject><subject>Animals</subject><subject>Binding Sites</subject><subject>Biopolymers - chemistry</subject><subject>Biopolymers - metabolism</subject><subject>Calmodulin-Binding Proteins - chemistry</subject><subject>Calmodulin-Binding Proteins - genetics</subject><subject>Calmodulin-Binding Proteins - metabolism</subject><subject>Chickens</subject><subject>In Vitro Techniques</subject><subject>Models, Biological</subject><subject>Myosins - antagonists & inhibitors</subject><subject>Osmolar Concentration</subject><subject>Peptide Fragments - chemistry</subject><subject>Peptide Fragments - genetics</subject><subject>Peptide Fragments - metabolism</subject><subject>Protein Binding</subject><subject>Rabbits</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>Tropomyosin - metabolism</subject><subject>Troponin - metabolism</subject><subject>Turkeys</subject><issn>0006-2960</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkMFu1DAURS0EokNhwQ8gb0BCauA5ie1k2Y4ojNRCpRk2bCzHeWldEru1HQlY8uV4lFFhwcp-8rn3WYeQlwzeMSjZ-85CKWtg8hFZMV5CUbctf0xWACCKshVwRJ7FeJvHGmT9lByxUnIumFiR3xs3jDM6g9QPdOOdNXSbArrrdHNCT02yLs864QnVrqdrPfYYJ-_o2ruYwmwS3dpfOexoukH6eZ46DPuqJXrpnZ8wRJrv-p_0mXW9ddc5m_A5eTLoMeKLw3lMvp5_2K0_FRdfPm7WpxeFruo2FbyBpucSkEkhTMf6pse2LyVyPVSN1FK0TVvJuhtAtmDMUDcasDGV5CXHUlTH5M3Sexf8_YwxqclGg-OoHfo5KllVWZDYg28X0AQfY8BB3QU76fBTMVB74epBeGZfHUrnbsL-L3kwnIFiAWxM-OPhXYfvSsj8N7W72qqz-vJ89-2qUpD51wuvTVS3fg4uO_nP4j9obZTw</recordid><startdate>20030527</startdate><enddate>20030527</enddate><creator>Fredricksen, Scott</creator><creator>Cai, Anmei</creator><creator>Gafurov, Boris</creator><creator>Resetar, Andrea</creator><creator>Chalovich, Joseph M.</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20030527</creationdate><title>Influence of Ionic Strength, Actin State, and Caldesmon Construct Size on the Number of Actin Monomers in a Caldesmon Binding Site</title><author>Fredricksen, Scott ; Cai, Anmei ; Gafurov, Boris ; Resetar, Andrea ; Chalovich, Joseph M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a349t-5808d570e1766cb1d8de9d27e5af387a76989374bf0790ccf48a0e8c37525e263</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Actins - chemistry</topic><topic>Actins - metabolism</topic><topic>Adenosine Triphosphate - metabolism</topic><topic>Animals</topic><topic>Binding Sites</topic><topic>Biopolymers - chemistry</topic><topic>Biopolymers - metabolism</topic><topic>Calmodulin-Binding Proteins - chemistry</topic><topic>Calmodulin-Binding Proteins - genetics</topic><topic>Calmodulin-Binding Proteins - metabolism</topic><topic>Chickens</topic><topic>In Vitro Techniques</topic><topic>Models, Biological</topic><topic>Myosins - antagonists & inhibitors</topic><topic>Osmolar Concentration</topic><topic>Peptide Fragments - chemistry</topic><topic>Peptide Fragments - genetics</topic><topic>Peptide Fragments - metabolism</topic><topic>Protein Binding</topic><topic>Rabbits</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>Tropomyosin - metabolism</topic><topic>Troponin - metabolism</topic><topic>Turkeys</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fredricksen, Scott</creatorcontrib><creatorcontrib>Cai, Anmei</creatorcontrib><creatorcontrib>Gafurov, Boris</creatorcontrib><creatorcontrib>Resetar, Andrea</creatorcontrib><creatorcontrib>Chalovich, Joseph M.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fredricksen, Scott</au><au>Cai, Anmei</au><au>Gafurov, Boris</au><au>Resetar, Andrea</au><au>Chalovich, Joseph M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Influence of Ionic Strength, Actin State, and Caldesmon Construct Size on the Number of Actin Monomers in a Caldesmon Binding Site</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>2003-05-27</date><risdate>2003</risdate><volume>42</volume><issue>20</issue><spage>6136</spage><epage>6148</epage><pages>6136-6148</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>There is no consensus on the mechanism of inhibition of actin−myosin ATPase activity by caldesmon. Various models are based on different assumptions for the number of actin monomers that constitute a caldesmon binding site. Differences in binding behavior may be due to variations in the assay, the range of caldesmon concentrations, the type of caldesmon, and the method of data analysis used. We have evaluated these factors by measuring binding in the presence and absence of tropomyosin with both intact caldesmon and a recombinant 35 kDa actin binding fragment and with actin initially in the polymerized state or monomeric state. In all cases caldesmon binding could be simulated with a model having one class of binding sites. However, the number of actin monomers constituting a site was variable. Binding to F-actin at 165 mM ionic strength was best described with 7 actin monomers per site. When caldesmon bound to actin during the polymerization of G-actin, the size of the binding site was 3. Binding of the expressed truncated fragment, Cad35, could be described with 3 monomers per site. A simple interpretation of the data is that caldesmon binds tightly to 2−3 actin monomers. Additional parts of caldesmon bind less tightly to actin, causing caldesmon to cover approximately 7 actin monomers. The appendix contains an analysis of several binding curves with multiple binding site models. There is no compelling evidence for two classes of binding sites.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>12755616</pmid><doi>10.1021/bi0274017</doi><tpages>13</tpages></addata></record> |
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subjects | Actins - chemistry Actins - metabolism Adenosine Triphosphate - metabolism Animals Binding Sites Biopolymers - chemistry Biopolymers - metabolism Calmodulin-Binding Proteins - chemistry Calmodulin-Binding Proteins - genetics Calmodulin-Binding Proteins - metabolism Chickens In Vitro Techniques Models, Biological Myosins - antagonists & inhibitors Osmolar Concentration Peptide Fragments - chemistry Peptide Fragments - genetics Peptide Fragments - metabolism Protein Binding Rabbits Recombinant Proteins - chemistry Recombinant Proteins - genetics Recombinant Proteins - metabolism Tropomyosin - metabolism Troponin - metabolism Turkeys |
title | Influence of Ionic Strength, Actin State, and Caldesmon Construct Size on the Number of Actin Monomers in a Caldesmon Binding Site |
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