Isothermal titration calorimetric procedure to determine protein–metal ion binding parameters in the presence of excess metal ion or chelator
Determination of binding parameters for metal ion binding to proteins usually requires preceding steps to remove protein-bound metal ions. Removal of bound metal ions from protein is often associated with decreased stability and inactivation. We present two simple isothermal titration calorimetric p...
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Veröffentlicht in: | Analytical biochemistry 2003-03, Vol.314 (2), p.227-234 |
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creator | Nielsen, Anders D Fuglsang, Claus C Westh, Peter |
description | Determination of binding parameters for metal ion binding to proteins usually requires preceding steps to remove protein-bound metal ions. Removal of bound metal ions from protein is often associated with decreased stability and inactivation. We present two simple isothermal titration calorimetric procedures that eliminate separate metal ion removal steps and directly monitor the exchange of metal ions between buffer, protein, and chelator. The concept is to add either excess chelator or metal ion to the protein under investigation and subsequently titrate with metal ion or chelator, respectively. It is thereby possible in the same experimental trial to obtain both chelator–metal ion and protein–metal ion binding parameters due to the different thermodynamic “fingerprints” of chelator and protein. The binding models and regression routines necessary to analyze the corresponding binding isotherms have been constructed. Verifications of the models have been done by titrations of mixtures of calcium chelators (BAPTA, HEDTA, and EGTA) and calcium ions and they were both able to account satisfactorily for the observed binding isotherms. Therefore, it was possible to determine stoichiometric and thermodynamic binding parameters. In addition, the concept has been tested on a recombinant α-amylase from
Bacillus halmapalus where it proved to be a consistent procedure to obtain calcium binding parameters. |
doi_str_mv | 10.1016/S0003-2697(02)00655-3 |
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Bacillus halmapalus where it proved to be a consistent procedure to obtain calcium binding parameters.</description><subject>alpha-Amylases - genetics</subject><subject>alpha-Amylases - metabolism</subject><subject>Bacillus</subject><subject>Bacillus - genetics</subject><subject>Binding models</subject><subject>Binding Sites - drug effects</subject><subject>Calcium - metabolism</subject><subject>Calcium - pharmacology</subject><subject>Calcium binding</subject><subject>Calcium-Binding Proteins - chemistry</subject><subject>Calcium-Binding Proteins - metabolism</subject><subject>Calorimetry - methods</subject><subject>Chelating Agents - metabolism</subject><subject>Chelating Agents - pharmacology</subject><subject>Edetic Acid - analogs & derivatives</subject><subject>Edetic Acid - metabolism</subject><subject>Edetic Acid - pharmacology</subject><subject>Egtazic Acid - analogs & derivatives</subject><subject>Egtazic Acid - metabolism</subject><subject>Egtazic Acid - pharmacology</subject><subject>Hydrogen-Ion Concentration</subject><subject>Isothermal titration calorimetry</subject><subject>Kinetics</subject><subject>Ligands</subject><subject>Protein Binding - drug effects</subject><subject>Recombinant Proteins - metabolism</subject><subject>Temperature</subject><subject>Thermodynamics</subject><issn>0003-2697</issn><issn>1096-0309</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcFO3DAQhi1UBNttHwHkU1UOacd2nMQnhFApSCtxKJwtx5kFoyRebC9qb7wBh74hT4LDruDIaaTR9_-j-X9CDhj8YMCqn38AQBS8UvV34EcAlZSF2CEzBqoqQID6RGZvyD75HOMdAGOlrPbIPuOVLDMzI08X0adbDIPpaXIpmOT8SK3pfXADpuAsXQVvsVsHpMnTDlOG3YjTOqEbnx__Zy6rJ13rxs6NN3RlghkmMlI30uyfaYw4WqR-SfGvxRjpu8wHam-xN8mHL2R3afqIX7dzTq7Pfl2dnheLy98XpyeLwgpVpqIyEoWU2BjT2EYoMByl4bKrWylaW3Neo0TT8loq4AobVmEparBLxDIjYk6-bXzzG_drjEkPLlrsezOiX0ddC8YBJHwIMtUwBWpylBvQBh9jwKVe5QhN-KcZ6Kky_VqZnvrQwPVrZXrSHW4PrNsBu3fVtqMMHG8AzHk8OAw6Wjdl2bmANunOuw9OvAAGTqoZ</recordid><startdate>20030315</startdate><enddate>20030315</enddate><creator>Nielsen, Anders D</creator><creator>Fuglsang, Claus C</creator><creator>Westh, Peter</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20030315</creationdate><title>Isothermal titration calorimetric procedure to determine protein–metal ion binding parameters in the presence of excess metal ion or chelator</title><author>Nielsen, Anders D ; Fuglsang, Claus C ; Westh, Peter</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c394t-6a5e355e8aa8c8390a2e5a25d7b53bc7227e5eab2759029e816e4370cfee4b533</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>alpha-Amylases - genetics</topic><topic>alpha-Amylases - metabolism</topic><topic>Bacillus</topic><topic>Bacillus - genetics</topic><topic>Binding models</topic><topic>Binding Sites - drug effects</topic><topic>Calcium - metabolism</topic><topic>Calcium - pharmacology</topic><topic>Calcium binding</topic><topic>Calcium-Binding Proteins - chemistry</topic><topic>Calcium-Binding Proteins - metabolism</topic><topic>Calorimetry - methods</topic><topic>Chelating Agents - metabolism</topic><topic>Chelating Agents - pharmacology</topic><topic>Edetic Acid - analogs & derivatives</topic><topic>Edetic Acid - metabolism</topic><topic>Edetic Acid - pharmacology</topic><topic>Egtazic Acid - analogs & derivatives</topic><topic>Egtazic Acid - metabolism</topic><topic>Egtazic Acid - pharmacology</topic><topic>Hydrogen-Ion Concentration</topic><topic>Isothermal titration calorimetry</topic><topic>Kinetics</topic><topic>Ligands</topic><topic>Protein Binding - drug effects</topic><topic>Recombinant Proteins - metabolism</topic><topic>Temperature</topic><topic>Thermodynamics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nielsen, Anders D</creatorcontrib><creatorcontrib>Fuglsang, Claus C</creatorcontrib><creatorcontrib>Westh, Peter</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>Analytical biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nielsen, Anders D</au><au>Fuglsang, Claus C</au><au>Westh, Peter</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isothermal titration calorimetric procedure to determine protein–metal ion binding parameters in the presence of excess metal ion or chelator</atitle><jtitle>Analytical biochemistry</jtitle><addtitle>Anal Biochem</addtitle><date>2003-03-15</date><risdate>2003</risdate><volume>314</volume><issue>2</issue><spage>227</spage><epage>234</epage><pages>227-234</pages><issn>0003-2697</issn><eissn>1096-0309</eissn><abstract>Determination of binding parameters for metal ion binding to proteins usually requires preceding steps to remove protein-bound metal ions. Removal of bound metal ions from protein is often associated with decreased stability and inactivation. We present two simple isothermal titration calorimetric procedures that eliminate separate metal ion removal steps and directly monitor the exchange of metal ions between buffer, protein, and chelator. The concept is to add either excess chelator or metal ion to the protein under investigation and subsequently titrate with metal ion or chelator, respectively. It is thereby possible in the same experimental trial to obtain both chelator–metal ion and protein–metal ion binding parameters due to the different thermodynamic “fingerprints” of chelator and protein. The binding models and regression routines necessary to analyze the corresponding binding isotherms have been constructed. Verifications of the models have been done by titrations of mixtures of calcium chelators (BAPTA, HEDTA, and EGTA) and calcium ions and they were both able to account satisfactorily for the observed binding isotherms. Therefore, it was possible to determine stoichiometric and thermodynamic binding parameters. In addition, the concept has been tested on a recombinant α-amylase from
Bacillus halmapalus where it proved to be a consistent procedure to obtain calcium binding parameters.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>12654309</pmid><doi>10.1016/S0003-2697(02)00655-3</doi><tpages>8</tpages></addata></record> |
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subjects | alpha-Amylases - genetics alpha-Amylases - metabolism Bacillus Bacillus - genetics Binding models Binding Sites - drug effects Calcium - metabolism Calcium - pharmacology Calcium binding Calcium-Binding Proteins - chemistry Calcium-Binding Proteins - metabolism Calorimetry - methods Chelating Agents - metabolism Chelating Agents - pharmacology Edetic Acid - analogs & derivatives Edetic Acid - metabolism Edetic Acid - pharmacology Egtazic Acid - analogs & derivatives Egtazic Acid - metabolism Egtazic Acid - pharmacology Hydrogen-Ion Concentration Isothermal titration calorimetry Kinetics Ligands Protein Binding - drug effects Recombinant Proteins - metabolism Temperature Thermodynamics |
title | Isothermal titration calorimetric procedure to determine protein–metal ion binding parameters in the presence of excess metal ion or chelator |
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