The complement component C5 of the common carp (Cyprinus carpio): cDNA cloning of two distinct isotypes that differ in a functional site
The complement component C5 plays important roles in inflammatory responses and complement-mediated cytolysis. In bony fish, although C5 has been identified at the DNA or the protein level in trout, carp and gilthead seabream, only partial C5 sequences are available. The present study was designed t...
Gespeichert in:
Veröffentlicht in: | Immunogenetics (New York) 2003-02, Vol.54 (11), p.807-815 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 815 |
---|---|
container_issue | 11 |
container_start_page | 807 |
container_title | Immunogenetics (New York) |
container_volume | 54 |
creator | Kato, Yoko Nakao, Miki Mutsuro, Junichi Zarkadis, Ioannis K Yano, Tomoki |
description | The complement component C5 plays important roles in inflammatory responses and complement-mediated cytolysis. In bony fish, although C5 has been identified at the DNA or the protein level in trout, carp and gilthead seabream, only partial C5 sequences are available. The present study was designed to obtain the complete primary structure of C5 from the common carp ( Cyprinus carpio) and to examine its possible structural diversity. Reverse-transcribed polymerase chain reaction amplification from carp hepatopancreatic RNA resulted in isolation of six distinct C5-like cDNA segments, which were grouped into two divergent types (type I and type II). Using two sequences representative of the two types as probes, two distinct full-length cDNA clones (C5-1 and C5-2) were isolated, in addition to a truncated isoform of C5-1 (C5-1'). The deduced amino acid sequences of C5-1 and C5-2 share 83% identity and predict a typical two-chain structure of the mature protein that lacks the thioester bond, as in C5 from other animals. Southern hybridization of genomic DNA suggested the presence of multiple genes encoding C5-type I and a single gene encoding C5-type II. Interestingly, carp C5-type I contains novel subtypes like C5-1 that have a histidine instead of the well-conserved arginine at the cleavage site for the C5 convertase, both in the complete and truncated forms. Northern blotting analysis suggested that C5-type I and C5-type II are mainly expressed in hepatopancreas, and the expression levels are significantly increased by stimulating carp with lipopolysaccharide or beta-1,3-glucan. Possible functional divergence among the C5 isotypes in carp is discussed. |
doi_str_mv | 10.1007/s00251-002-0528-7 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_73094283</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>73094283</sourcerecordid><originalsourceid>FETCH-LOGICAL-c399t-49cf9453a3035c28232b0a37b8c66ebeea4ff7dd0e6cda7749a070aec32154833</originalsourceid><addsrcrecordid>eNqNkcFu1DAQhi0EosvCA3BBFgcEh5QZ24ljbtUCpVIFl3KOvI4NrhI7xI7QvgGPjbO7EhKnXsZjz_f_kucn5CXCJQLI9wmA1ViVWkHN2ko-IhsUnFXIEB-TDYDilZSIF-RZSvcAWCvWPCUXyBpsFYoN-XP301ITx2mwow352MawdruaRkfzaTzGQI2eJ_p2d5hmH5Z0vPr47gM1H79eUTPE4MOPo-R3pL1P2QeTqU8xHyabipHO5dk5O1MfqKZuKXMfgx5o8tk-J0-cHpJ9cT635PvnT3e7L9Xtt-ub3dVtZbhSuRLKOCVqrjnw2rCWcbYHzeW-NU1j99Zq4Zzse7CN6bWUQmmQoK3hDGvRcr4lb06-0xx_LTblbvTJ2GHQwcYldZKDEuwBILZlsUqu4Ov_wPu4zOVfqxkH5FyIAuEJMnNMabauK2sc9XzoELo1zO4UZldqt4ZZtFvy6my87Efb_1Oc0-N_AVDgmi8</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>733013344</pqid></control><display><type>article</type><title>The complement component C5 of the common carp (Cyprinus carpio): cDNA cloning of two distinct isotypes that differ in a functional site</title><source>MEDLINE</source><source>SpringerNature Journals</source><creator>Kato, Yoko ; Nakao, Miki ; Mutsuro, Junichi ; Zarkadis, Ioannis K ; Yano, Tomoki</creator><creatorcontrib>Kato, Yoko ; Nakao, Miki ; Mutsuro, Junichi ; Zarkadis, Ioannis K ; Yano, Tomoki</creatorcontrib><description>The complement component C5 plays important roles in inflammatory responses and complement-mediated cytolysis. In bony fish, although C5 has been identified at the DNA or the protein level in trout, carp and gilthead seabream, only partial C5 sequences are available. The present study was designed to obtain the complete primary structure of C5 from the common carp ( Cyprinus carpio) and to examine its possible structural diversity. Reverse-transcribed polymerase chain reaction amplification from carp hepatopancreatic RNA resulted in isolation of six distinct C5-like cDNA segments, which were grouped into two divergent types (type I and type II). Using two sequences representative of the two types as probes, two distinct full-length cDNA clones (C5-1 and C5-2) were isolated, in addition to a truncated isoform of C5-1 (C5-1'). The deduced amino acid sequences of C5-1 and C5-2 share 83% identity and predict a typical two-chain structure of the mature protein that lacks the thioester bond, as in C5 from other animals. Southern hybridization of genomic DNA suggested the presence of multiple genes encoding C5-type I and a single gene encoding C5-type II. Interestingly, carp C5-type I contains novel subtypes like C5-1 that have a histidine instead of the well-conserved arginine at the cleavage site for the C5 convertase, both in the complete and truncated forms. Northern blotting analysis suggested that C5-type I and C5-type II are mainly expressed in hepatopancreas, and the expression levels are significantly increased by stimulating carp with lipopolysaccharide or beta-1,3-glucan. Possible functional divergence among the C5 isotypes in carp is discussed.</description><identifier>ISSN: 0093-7711</identifier><identifier>EISSN: 1432-1211</identifier><identifier>DOI: 10.1007/s00251-002-0528-7</identifier><identifier>PMID: 12618914</identifier><language>eng</language><publisher>United States: Springer Nature B.V</publisher><subject>Amino Acid Sequence ; Amino acids ; Animals ; Base Sequence ; Binding Sites - genetics ; Carps - genetics ; Carps - immunology ; Cloning ; Cloning, Molecular ; Complement C3-C5 Convertases - metabolism ; Complement C5 - genetics ; Complement C5 - metabolism ; Deoxyribonucleic acid ; DNA ; DNA, Complementary - genetics ; Gene Expression ; Genetic Variation ; Humans ; Mice ; Molecular Sequence Data ; Phylogeny ; Protein Isoforms - genetics ; Protein Isoforms - metabolism ; Reverse Transcriptase Polymerase Chain Reaction ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Sequence Homology, Amino Acid ; Species Specificity ; Trout</subject><ispartof>Immunogenetics (New York), 2003-02, Vol.54 (11), p.807-815</ispartof><rights>Springer-Verlag 2003</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c399t-49cf9453a3035c28232b0a37b8c66ebeea4ff7dd0e6cda7749a070aec32154833</citedby><cites>FETCH-LOGICAL-c399t-49cf9453a3035c28232b0a37b8c66ebeea4ff7dd0e6cda7749a070aec32154833</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12618914$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kato, Yoko</creatorcontrib><creatorcontrib>Nakao, Miki</creatorcontrib><creatorcontrib>Mutsuro, Junichi</creatorcontrib><creatorcontrib>Zarkadis, Ioannis K</creatorcontrib><creatorcontrib>Yano, Tomoki</creatorcontrib><title>The complement component C5 of the common carp (Cyprinus carpio): cDNA cloning of two distinct isotypes that differ in a functional site</title><title>Immunogenetics (New York)</title><addtitle>Immunogenetics</addtitle><description>The complement component C5 plays important roles in inflammatory responses and complement-mediated cytolysis. In bony fish, although C5 has been identified at the DNA or the protein level in trout, carp and gilthead seabream, only partial C5 sequences are available. The present study was designed to obtain the complete primary structure of C5 from the common carp ( Cyprinus carpio) and to examine its possible structural diversity. Reverse-transcribed polymerase chain reaction amplification from carp hepatopancreatic RNA resulted in isolation of six distinct C5-like cDNA segments, which were grouped into two divergent types (type I and type II). Using two sequences representative of the two types as probes, two distinct full-length cDNA clones (C5-1 and C5-2) were isolated, in addition to a truncated isoform of C5-1 (C5-1'). The deduced amino acid sequences of C5-1 and C5-2 share 83% identity and predict a typical two-chain structure of the mature protein that lacks the thioester bond, as in C5 from other animals. Southern hybridization of genomic DNA suggested the presence of multiple genes encoding C5-type I and a single gene encoding C5-type II. Interestingly, carp C5-type I contains novel subtypes like C5-1 that have a histidine instead of the well-conserved arginine at the cleavage site for the C5 convertase, both in the complete and truncated forms. Northern blotting analysis suggested that C5-type I and C5-type II are mainly expressed in hepatopancreas, and the expression levels are significantly increased by stimulating carp with lipopolysaccharide or beta-1,3-glucan. Possible functional divergence among the C5 isotypes in carp is discussed.</description><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Binding Sites - genetics</subject><subject>Carps - genetics</subject><subject>Carps - immunology</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>Complement C3-C5 Convertases - metabolism</subject><subject>Complement C5 - genetics</subject><subject>Complement C5 - metabolism</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Complementary - genetics</subject><subject>Gene Expression</subject><subject>Genetic Variation</subject><subject>Humans</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Protein Isoforms - genetics</subject><subject>Protein Isoforms - metabolism</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Species Specificity</subject><subject>Trout</subject><issn>0093-7711</issn><issn>1432-1211</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkcFu1DAQhi0EosvCA3BBFgcEh5QZ24ljbtUCpVIFl3KOvI4NrhI7xI7QvgGPjbO7EhKnXsZjz_f_kucn5CXCJQLI9wmA1ViVWkHN2ko-IhsUnFXIEB-TDYDilZSIF-RZSvcAWCvWPCUXyBpsFYoN-XP301ITx2mwow352MawdruaRkfzaTzGQI2eJ_p2d5hmH5Z0vPr47gM1H79eUTPE4MOPo-R3pL1P2QeTqU8xHyabipHO5dk5O1MfqKZuKXMfgx5o8tk-J0-cHpJ9cT635PvnT3e7L9Xtt-ub3dVtZbhSuRLKOCVqrjnw2rCWcbYHzeW-NU1j99Zq4Zzse7CN6bWUQmmQoK3hDGvRcr4lb06-0xx_LTblbvTJ2GHQwcYldZKDEuwBILZlsUqu4Ov_wPu4zOVfqxkH5FyIAuEJMnNMabauK2sc9XzoELo1zO4UZldqt4ZZtFvy6my87Efb_1Oc0-N_AVDgmi8</recordid><startdate>20030201</startdate><enddate>20030201</enddate><creator>Kato, Yoko</creator><creator>Nakao, Miki</creator><creator>Mutsuro, Junichi</creator><creator>Zarkadis, Ioannis K</creator><creator>Yano, Tomoki</creator><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T5</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>F1W</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>7X8</scope></search><sort><creationdate>20030201</creationdate><title>The complement component C5 of the common carp (Cyprinus carpio): cDNA cloning of two distinct isotypes that differ in a functional site</title><author>Kato, Yoko ; Nakao, Miki ; Mutsuro, Junichi ; Zarkadis, Ioannis K ; Yano, Tomoki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c399t-49cf9453a3035c28232b0a37b8c66ebeea4ff7dd0e6cda7749a070aec32154833</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Binding Sites - genetics</topic><topic>Carps - genetics</topic><topic>Carps - immunology</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>Complement C3-C5 Convertases - metabolism</topic><topic>Complement C5 - genetics</topic><topic>Complement C5 - metabolism</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Complementary - genetics</topic><topic>Gene Expression</topic><topic>Genetic Variation</topic><topic>Humans</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Protein Isoforms - genetics</topic><topic>Protein Isoforms - metabolism</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Species Specificity</topic><topic>Trout</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kato, Yoko</creatorcontrib><creatorcontrib>Nakao, Miki</creatorcontrib><creatorcontrib>Mutsuro, Junichi</creatorcontrib><creatorcontrib>Zarkadis, Ioannis K</creatorcontrib><creatorcontrib>Yano, Tomoki</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>MEDLINE - Academic</collection><jtitle>Immunogenetics (New York)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kato, Yoko</au><au>Nakao, Miki</au><au>Mutsuro, Junichi</au><au>Zarkadis, Ioannis K</au><au>Yano, Tomoki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The complement component C5 of the common carp (Cyprinus carpio): cDNA cloning of two distinct isotypes that differ in a functional site</atitle><jtitle>Immunogenetics (New York)</jtitle><addtitle>Immunogenetics</addtitle><date>2003-02-01</date><risdate>2003</risdate><volume>54</volume><issue>11</issue><spage>807</spage><epage>815</epage><pages>807-815</pages><issn>0093-7711</issn><eissn>1432-1211</eissn><abstract>The complement component C5 plays important roles in inflammatory responses and complement-mediated cytolysis. In bony fish, although C5 has been identified at the DNA or the protein level in trout, carp and gilthead seabream, only partial C5 sequences are available. The present study was designed to obtain the complete primary structure of C5 from the common carp ( Cyprinus carpio) and to examine its possible structural diversity. Reverse-transcribed polymerase chain reaction amplification from carp hepatopancreatic RNA resulted in isolation of six distinct C5-like cDNA segments, which were grouped into two divergent types (type I and type II). Using two sequences representative of the two types as probes, two distinct full-length cDNA clones (C5-1 and C5-2) were isolated, in addition to a truncated isoform of C5-1 (C5-1'). The deduced amino acid sequences of C5-1 and C5-2 share 83% identity and predict a typical two-chain structure of the mature protein that lacks the thioester bond, as in C5 from other animals. Southern hybridization of genomic DNA suggested the presence of multiple genes encoding C5-type I and a single gene encoding C5-type II. Interestingly, carp C5-type I contains novel subtypes like C5-1 that have a histidine instead of the well-conserved arginine at the cleavage site for the C5 convertase, both in the complete and truncated forms. Northern blotting analysis suggested that C5-type I and C5-type II are mainly expressed in hepatopancreas, and the expression levels are significantly increased by stimulating carp with lipopolysaccharide or beta-1,3-glucan. Possible functional divergence among the C5 isotypes in carp is discussed.</abstract><cop>United States</cop><pub>Springer Nature B.V</pub><pmid>12618914</pmid><doi>10.1007/s00251-002-0528-7</doi><tpages>9</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0093-7711 |
ispartof | Immunogenetics (New York), 2003-02, Vol.54 (11), p.807-815 |
issn | 0093-7711 1432-1211 |
language | eng |
recordid | cdi_proquest_miscellaneous_73094283 |
source | MEDLINE; SpringerNature Journals |
subjects | Amino Acid Sequence Amino acids Animals Base Sequence Binding Sites - genetics Carps - genetics Carps - immunology Cloning Cloning, Molecular Complement C3-C5 Convertases - metabolism Complement C5 - genetics Complement C5 - metabolism Deoxyribonucleic acid DNA DNA, Complementary - genetics Gene Expression Genetic Variation Humans Mice Molecular Sequence Data Phylogeny Protein Isoforms - genetics Protein Isoforms - metabolism Reverse Transcriptase Polymerase Chain Reaction RNA, Messenger - genetics RNA, Messenger - metabolism Sequence Homology, Amino Acid Species Specificity Trout |
title | The complement component C5 of the common carp (Cyprinus carpio): cDNA cloning of two distinct isotypes that differ in a functional site |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-21T04%3A45%3A17IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=The%20complement%20component%20C5%20of%20the%20common%20carp%20(Cyprinus%20carpio):%20cDNA%20cloning%20of%20two%20distinct%20isotypes%20that%20differ%20in%20a%20functional%20site&rft.jtitle=Immunogenetics%20(New%20York)&rft.au=Kato,%20Yoko&rft.date=2003-02-01&rft.volume=54&rft.issue=11&rft.spage=807&rft.epage=815&rft.pages=807-815&rft.issn=0093-7711&rft.eissn=1432-1211&rft_id=info:doi/10.1007/s00251-002-0528-7&rft_dat=%3Cproquest_cross%3E73094283%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=733013344&rft_id=info:pmid/12618914&rfr_iscdi=true |