Identification and in vivo characterization of PpaA, a regulator of photosystem formation in Rhodobacter sphaeroides
1 Department of Molecular Biology, University of Wyoming, Laramie, WY 82071-3944, USA 2 Department of Microbiology and Parasitology, University of Queensland, Brisbane 4072, Australia 3 Department of Microbiology and Molecular Genetics, University of Texas Medical School, Houston, TX 77030, USA Corr...
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Veröffentlicht in: | Microbiology (Society for General Microbiology) 2003-02, Vol.149 (2), p.377-388 |
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creator | Gomelsky, Larissa Sram, Jakub Moskvin, Oleg V Horne, Irene M Dodd, Helen N Pemberton, John M McEwan, Alastair G Kaplan, Samuel Gomelsky, Mark |
description | 1 Department of Molecular Biology, University of Wyoming, Laramie, WY 82071-3944, USA
2 Department of Microbiology and Parasitology, University of Queensland, Brisbane 4072, Australia
3 Department of Microbiology and Molecular Genetics, University of Texas Medical School, Houston, TX 77030, USA
Correspondence Mark Gomelsky gomelsky{at}uwyo.edu
A regulatory protein, PpaA, involved in photosystem formation in the anoxygenic phototrophic proteobacterium Rhodobacter sphaeroides has been identified and characterized in vivo . Based on the phenotypes of cells expressing the ppaA gene in extra copy and on the phenotype of the ppaA null mutant, it was concluded that PpaA activates photopigment production and puc operon expression under aerobic conditions. This is in contrast to the function of the PpaA homologue from Rhodobacter capsulatus , AerR, which acts as a repressor under aerobic conditions [Dong, C., Elsen, S., Swem, L. R. & Bauer, C. E. (2002). J Bacteriol 184, 28052814]. The expression of the ppaA gene increases several-fold in response to a decrease in oxygen tension, suggesting that the PpaA protein is active under conditions of low or no oxygen. However, no discernible phenotype of a ppaA null mutant was observed under anaerobic conditions tested thus far. The photosystem gene repressor PpsR mediates repression of ppaA gene expression under aerobic conditions. Sequence analysis of PpaA homologues from several anoxygenic phototrophic bacteria revealed a putative corrinoid-binding domain. It is suggested that PpaA binds a corrinoid cofactor and the availability or structure of this cofactor affects PpaA activity.
Abbreviations: PS, photosystem; RC, reaction centre; Km, kanamycin; Sm, streptomycin; Sp, spectinomycin; Tc, tetracycline
The GenBank accession number for the sequence reported in this paper is L19596 . |
doi_str_mv | 10.1099/mic.0.25972-0 |
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2 Department of Microbiology and Parasitology, University of Queensland, Brisbane 4072, Australia
3 Department of Microbiology and Molecular Genetics, University of Texas Medical School, Houston, TX 77030, USA
Correspondence Mark Gomelsky gomelsky{at}uwyo.edu
A regulatory protein, PpaA, involved in photosystem formation in the anoxygenic phototrophic proteobacterium Rhodobacter sphaeroides has been identified and characterized in vivo . Based on the phenotypes of cells expressing the ppaA gene in extra copy and on the phenotype of the ppaA null mutant, it was concluded that PpaA activates photopigment production and puc operon expression under aerobic conditions. This is in contrast to the function of the PpaA homologue from Rhodobacter capsulatus , AerR, which acts as a repressor under aerobic conditions [Dong, C., Elsen, S., Swem, L. R. & Bauer, C. E. (2002). J Bacteriol 184, 28052814]. The expression of the ppaA gene increases several-fold in response to a decrease in oxygen tension, suggesting that the PpaA protein is active under conditions of low or no oxygen. However, no discernible phenotype of a ppaA null mutant was observed under anaerobic conditions tested thus far. The photosystem gene repressor PpsR mediates repression of ppaA gene expression under aerobic conditions. Sequence analysis of PpaA homologues from several anoxygenic phototrophic bacteria revealed a putative corrinoid-binding domain. It is suggested that PpaA binds a corrinoid cofactor and the availability or structure of this cofactor affects PpaA activity.
Abbreviations: PS, photosystem; RC, reaction centre; Km, kanamycin; Sm, streptomycin; Sp, spectinomycin; Tc, tetracycline
The GenBank accession number for the sequence reported in this paper is L19596 .</description><identifier>ISSN: 1350-0872</identifier><identifier>EISSN: 1465-2080</identifier><identifier>DOI: 10.1099/mic.0.25972-0</identifier><identifier>PMID: 12624200</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Aerobiosis ; Amino Acid Sequence ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Bacteriochlorophylls - metabolism ; Bacteriology ; Biological and medical sciences ; Corrinoids ; DNA-Binding Proteins - genetics ; DNA-Binding Proteins - metabolism ; Flavoproteins ; Fundamental and applied biological sciences. Psychology ; Gene Expression Regulation, Bacterial ; Light-Harvesting Protein Complexes ; Metabolism. Enzymes ; Microbiology ; Molecular Sequence Data ; Mutation ; Photosynthesis ; Photosynthetic Reaction Center Complex Proteins - genetics ; Photosynthetic Reaction Center Complex Proteins - metabolism ; Porphyrins - metabolism ; PpaA regulatory protein ; Repressor Proteins - genetics ; Repressor Proteins - metabolism ; Rhodobacter sphaeroides ; Rhodobacter sphaeroides - genetics ; Rhodobacter sphaeroides - growth & development ; Rhodobacter sphaeroides - physiology ; Sequence Analysis, DNA ; Trans-Activators - chemistry ; Trans-Activators - genetics ; Trans-Activators - metabolism</subject><ispartof>Microbiology (Society for General Microbiology), 2003-02, Vol.149 (2), p.377-388</ispartof><rights>2003 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c488t-f05460bc144a9b44b8e8b25a5f24bc91c509f88cfd7b497e7314102a2abb784f3</citedby><cites>FETCH-LOGICAL-c488t-f05460bc144a9b44b8e8b25a5f24bc91c509f88cfd7b497e7314102a2abb784f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14528624$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12624200$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gomelsky, Larissa</creatorcontrib><creatorcontrib>Sram, Jakub</creatorcontrib><creatorcontrib>Moskvin, Oleg V</creatorcontrib><creatorcontrib>Horne, Irene M</creatorcontrib><creatorcontrib>Dodd, Helen N</creatorcontrib><creatorcontrib>Pemberton, John M</creatorcontrib><creatorcontrib>McEwan, Alastair G</creatorcontrib><creatorcontrib>Kaplan, Samuel</creatorcontrib><creatorcontrib>Gomelsky, Mark</creatorcontrib><title>Identification and in vivo characterization of PpaA, a regulator of photosystem formation in Rhodobacter sphaeroides</title><title>Microbiology (Society for General Microbiology)</title><addtitle>Microbiology</addtitle><description>1 Department of Molecular Biology, University of Wyoming, Laramie, WY 82071-3944, USA
2 Department of Microbiology and Parasitology, University of Queensland, Brisbane 4072, Australia
3 Department of Microbiology and Molecular Genetics, University of Texas Medical School, Houston, TX 77030, USA
Correspondence Mark Gomelsky gomelsky{at}uwyo.edu
A regulatory protein, PpaA, involved in photosystem formation in the anoxygenic phototrophic proteobacterium Rhodobacter sphaeroides has been identified and characterized in vivo . Based on the phenotypes of cells expressing the ppaA gene in extra copy and on the phenotype of the ppaA null mutant, it was concluded that PpaA activates photopigment production and puc operon expression under aerobic conditions. This is in contrast to the function of the PpaA homologue from Rhodobacter capsulatus , AerR, which acts as a repressor under aerobic conditions [Dong, C., Elsen, S., Swem, L. R. & Bauer, C. E. (2002). J Bacteriol 184, 28052814]. The expression of the ppaA gene increases several-fold in response to a decrease in oxygen tension, suggesting that the PpaA protein is active under conditions of low or no oxygen. However, no discernible phenotype of a ppaA null mutant was observed under anaerobic conditions tested thus far. The photosystem gene repressor PpsR mediates repression of ppaA gene expression under aerobic conditions. Sequence analysis of PpaA homologues from several anoxygenic phototrophic bacteria revealed a putative corrinoid-binding domain. It is suggested that PpaA binds a corrinoid cofactor and the availability or structure of this cofactor affects PpaA activity.
Abbreviations: PS, photosystem; RC, reaction centre; Km, kanamycin; Sm, streptomycin; Sp, spectinomycin; Tc, tetracycline
The GenBank accession number for the sequence reported in this paper is L19596 .</description><subject>Aerobiosis</subject><subject>Amino Acid Sequence</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Bacteriochlorophylls - metabolism</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Corrinoids</subject><subject>DNA-Binding Proteins - genetics</subject><subject>DNA-Binding Proteins - metabolism</subject><subject>Flavoproteins</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Expression Regulation, Bacterial</subject><subject>Light-Harvesting Protein Complexes</subject><subject>Metabolism. Enzymes</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Photosynthesis</subject><subject>Photosynthetic Reaction Center Complex Proteins - genetics</subject><subject>Photosynthetic Reaction Center Complex Proteins - metabolism</subject><subject>Porphyrins - metabolism</subject><subject>PpaA regulatory protein</subject><subject>Repressor Proteins - genetics</subject><subject>Repressor Proteins - metabolism</subject><subject>Rhodobacter sphaeroides</subject><subject>Rhodobacter sphaeroides - genetics</subject><subject>Rhodobacter sphaeroides - growth & development</subject><subject>Rhodobacter sphaeroides - physiology</subject><subject>Sequence Analysis, DNA</subject><subject>Trans-Activators - chemistry</subject><subject>Trans-Activators - genetics</subject><subject>Trans-Activators - metabolism</subject><issn>1350-0872</issn><issn>1465-2080</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0c9vFCEUB3BiNPaHHr0aLhoPzvpgoDDHptHapEkbo2cCDOxgZoYR2DbtX1-2s0mPniC8D99HeAh9ILAh0HXfpmA3sKG8E7SBV-iYsDPeUJDwuu5bDg1IQY_QSc5_AWoRyFt0ROgZZRTgGJWr3s0l-GB1CXHGeu5xmPFduIvYDjppW1wKj2sxeny76POvWOPktrtRl5j2h8sQS8wPubgJ-5imVdeYX0Pso3nOwHkZtEsx9C6_Q2-8HrN7f1hP0Z8f339f_Gyuby6vLs6vG8ukLI0HXt9rLGFMd4YxI500lGvuKTO2I5ZD56W0vheGdcKJljACVFNtjJDMt6fo85q7pPhv53JRU8jWjaOeXdxlJdr95wD5LySVSd7SCpsV2hRzTs6rJYVJpwdFQO3nUS9aBep5Hgqq_3gI3pnJ9S_6MIAKPh2AzlaPPunZhvziGKey0uq-rG4I2-E-JKe2bq69UjQh7psS1imqWiHaJ-yCos4</recordid><startdate>20030201</startdate><enddate>20030201</enddate><creator>Gomelsky, Larissa</creator><creator>Sram, Jakub</creator><creator>Moskvin, Oleg V</creator><creator>Horne, Irene M</creator><creator>Dodd, Helen N</creator><creator>Pemberton, John M</creator><creator>McEwan, Alastair G</creator><creator>Kaplan, Samuel</creator><creator>Gomelsky, Mark</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20030201</creationdate><title>Identification and in vivo characterization of PpaA, a regulator of photosystem formation in Rhodobacter sphaeroides</title><author>Gomelsky, Larissa ; Sram, Jakub ; Moskvin, Oleg V ; Horne, Irene M ; Dodd, Helen N ; Pemberton, John M ; McEwan, Alastair G ; Kaplan, Samuel ; Gomelsky, Mark</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c488t-f05460bc144a9b44b8e8b25a5f24bc91c509f88cfd7b497e7314102a2abb784f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Aerobiosis</topic><topic>Amino Acid Sequence</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Bacteriochlorophylls - metabolism</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Corrinoids</topic><topic>DNA-Binding Proteins - genetics</topic><topic>DNA-Binding Proteins - metabolism</topic><topic>Flavoproteins</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Expression Regulation, Bacterial</topic><topic>Light-Harvesting Protein Complexes</topic><topic>Metabolism. Enzymes</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Photosynthesis</topic><topic>Photosynthetic Reaction Center Complex Proteins - genetics</topic><topic>Photosynthetic Reaction Center Complex Proteins - metabolism</topic><topic>Porphyrins - metabolism</topic><topic>PpaA regulatory protein</topic><topic>Repressor Proteins - genetics</topic><topic>Repressor Proteins - metabolism</topic><topic>Rhodobacter sphaeroides</topic><topic>Rhodobacter sphaeroides - genetics</topic><topic>Rhodobacter sphaeroides - growth & development</topic><topic>Rhodobacter sphaeroides - physiology</topic><topic>Sequence Analysis, DNA</topic><topic>Trans-Activators - chemistry</topic><topic>Trans-Activators - genetics</topic><topic>Trans-Activators - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gomelsky, Larissa</creatorcontrib><creatorcontrib>Sram, Jakub</creatorcontrib><creatorcontrib>Moskvin, Oleg V</creatorcontrib><creatorcontrib>Horne, Irene M</creatorcontrib><creatorcontrib>Dodd, Helen N</creatorcontrib><creatorcontrib>Pemberton, John M</creatorcontrib><creatorcontrib>McEwan, Alastair G</creatorcontrib><creatorcontrib>Kaplan, Samuel</creatorcontrib><creatorcontrib>Gomelsky, Mark</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Microbiology (Society for General Microbiology)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gomelsky, Larissa</au><au>Sram, Jakub</au><au>Moskvin, Oleg V</au><au>Horne, Irene M</au><au>Dodd, Helen N</au><au>Pemberton, John M</au><au>McEwan, Alastair G</au><au>Kaplan, Samuel</au><au>Gomelsky, Mark</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and in vivo characterization of PpaA, a regulator of photosystem formation in Rhodobacter sphaeroides</atitle><jtitle>Microbiology (Society for General Microbiology)</jtitle><addtitle>Microbiology</addtitle><date>2003-02-01</date><risdate>2003</risdate><volume>149</volume><issue>2</issue><spage>377</spage><epage>388</epage><pages>377-388</pages><issn>1350-0872</issn><eissn>1465-2080</eissn><abstract>1 Department of Molecular Biology, University of Wyoming, Laramie, WY 82071-3944, USA
2 Department of Microbiology and Parasitology, University of Queensland, Brisbane 4072, Australia
3 Department of Microbiology and Molecular Genetics, University of Texas Medical School, Houston, TX 77030, USA
Correspondence Mark Gomelsky gomelsky{at}uwyo.edu
A regulatory protein, PpaA, involved in photosystem formation in the anoxygenic phototrophic proteobacterium Rhodobacter sphaeroides has been identified and characterized in vivo . Based on the phenotypes of cells expressing the ppaA gene in extra copy and on the phenotype of the ppaA null mutant, it was concluded that PpaA activates photopigment production and puc operon expression under aerobic conditions. This is in contrast to the function of the PpaA homologue from Rhodobacter capsulatus , AerR, which acts as a repressor under aerobic conditions [Dong, C., Elsen, S., Swem, L. R. & Bauer, C. E. (2002). J Bacteriol 184, 28052814]. The expression of the ppaA gene increases several-fold in response to a decrease in oxygen tension, suggesting that the PpaA protein is active under conditions of low or no oxygen. However, no discernible phenotype of a ppaA null mutant was observed under anaerobic conditions tested thus far. The photosystem gene repressor PpsR mediates repression of ppaA gene expression under aerobic conditions. Sequence analysis of PpaA homologues from several anoxygenic phototrophic bacteria revealed a putative corrinoid-binding domain. It is suggested that PpaA binds a corrinoid cofactor and the availability or structure of this cofactor affects PpaA activity.
Abbreviations: PS, photosystem; RC, reaction centre; Km, kanamycin; Sm, streptomycin; Sp, spectinomycin; Tc, tetracycline
The GenBank accession number for the sequence reported in this paper is L19596 .</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>12624200</pmid><doi>10.1099/mic.0.25972-0</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Aerobiosis Amino Acid Sequence Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - metabolism Bacteriochlorophylls - metabolism Bacteriology Biological and medical sciences Corrinoids DNA-Binding Proteins - genetics DNA-Binding Proteins - metabolism Flavoproteins Fundamental and applied biological sciences. Psychology Gene Expression Regulation, Bacterial Light-Harvesting Protein Complexes Metabolism. Enzymes Microbiology Molecular Sequence Data Mutation Photosynthesis Photosynthetic Reaction Center Complex Proteins - genetics Photosynthetic Reaction Center Complex Proteins - metabolism Porphyrins - metabolism PpaA regulatory protein Repressor Proteins - genetics Repressor Proteins - metabolism Rhodobacter sphaeroides Rhodobacter sphaeroides - genetics Rhodobacter sphaeroides - growth & development Rhodobacter sphaeroides - physiology Sequence Analysis, DNA Trans-Activators - chemistry Trans-Activators - genetics Trans-Activators - metabolism |
title | Identification and in vivo characterization of PpaA, a regulator of photosystem formation in Rhodobacter sphaeroides |
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