Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp
A 12,855 bp cryptic plasmid was isolated from strains of an endophytic Streptomyces sp. over a wide geographical area in South Australia. This plasmid was completely sequenced and 13 putative ORFs were identified. Two of the ORFs may be involved in the regulation of host plant genes. ORF7 exhibited...
Gespeichert in:
| Veröffentlicht in: | Plasmid 2003, Vol.49 (1), p.86-92 |
|---|---|
| Hauptverfasser: | , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 92 |
|---|---|
| container_issue | 1 |
| container_start_page | 86 |
| container_title | Plasmid |
| container_volume | 49 |
| creator | Coombs, Justin T. Franco, Christopher M.M. Loria, Rosemary |
| description | A 12,855
bp cryptic plasmid was isolated from strains of an endophytic
Streptomyces sp. over a wide geographical area in South Australia. This plasmid was completely sequenced and 13 putative ORFs were identified. Two of the ORFs may be involved in the regulation of host plant genes. ORF7 exhibited homology to a plant transcriptional regulatory protein and ORF1 was a homolog of a plant protein synthesis initiation factor. The plasmid appears to use a novel transfer mechanism for a
Streptomyces plasmid. Pocks were detected during conjugative transfer and
kor but not
tra homologs could be identified. This structure and the sequence of the putative Kor protein are similar to the pFQ series of plasmids isolated from
Frankia, another endophytic actinomycete. |
| doi_str_mv | 10.1016/S0147-619X(02)00153-1 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_73031769</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0147619X02001531</els_id><sourcerecordid>73031769</sourcerecordid><originalsourceid>FETCH-LOGICAL-c361t-aea869bf4d3d389f5dd862755083e7a1b10a4b461cb3c461d909ddae3ffaf1a93</originalsourceid><addsrcrecordid>eNqFkE1v1DAQhi0EotvCT6DyCVGpgZk4ceITQqt-IFVwKEjcLMceg9skTu1spf33ZLurcuQwmssz8-p9GHuH8BEB5adbwKopJKpfH6A8A8BaFPiCrRBUXahWwUu2ekaO2HHOdwAgS5Sv2RGWdVsB1CtG6zhMPc3EMz1saLRh_M3N6JYx_TaHzKPn08W3sgE854aP8ZF6jqK47_jUmzwEx32Kw8JzGl2c_mznYPntnGia47C1lHme3rBX3vSZ3h72Cft5efFjfV3cfL_6uv5yU1ghcS4MmVaqzldOONEqXzvXyrKpa2gFNQY7BFN1lUTbCbssp0A5Z0h4bzwaJU7Y-_3fKcWlTZ71ELKlvjcjxU3WjQCBjdyB9R60KeacyOsphcGkrUbQO7_6ya_eydNQ6ie_Gpe700PAphvI_bs6CF2Az3uAlpqPgZLONixayYVEdtYuhv9E_AVqv4qi</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>73031769</pqid></control><display><type>article</type><title>Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp</title><source>MEDLINE</source><source>ScienceDirect Journals (5 years ago - present)</source><creator>Coombs, Justin T. ; Franco, Christopher M.M. ; Loria, Rosemary</creator><creatorcontrib>Coombs, Justin T. ; Franco, Christopher M.M. ; Loria, Rosemary</creatorcontrib><description>A 12,855
bp cryptic plasmid was isolated from strains of an endophytic
Streptomyces sp. over a wide geographical area in South Australia. This plasmid was completely sequenced and 13 putative ORFs were identified. Two of the ORFs may be involved in the regulation of host plant genes. ORF7 exhibited homology to a plant transcriptional regulatory protein and ORF1 was a homolog of a plant protein synthesis initiation factor. The plasmid appears to use a novel transfer mechanism for a
Streptomyces plasmid. Pocks were detected during conjugative transfer and
kor but not
tra homologs could be identified. This structure and the sequence of the putative Kor protein are similar to the pFQ series of plasmids isolated from
Frankia, another endophytic actinomycete.</description><identifier>ISSN: 0147-619X</identifier><identifier>EISSN: 1095-9890</identifier><identifier>DOI: 10.1016/S0147-619X(02)00153-1</identifier><identifier>PMID: 12584005</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Bacterial Proteins - genetics ; Conjugation ; Endophyte ; kor ; Molecular Sequence Data ; Open Reading Frames ; Plants - microbiology ; Plasmids - genetics ; Sequence analysis ; Sequence Analysis, DNA ; Streptomyces ; Streptomyces - genetics ; Streptomyces - isolation & purification</subject><ispartof>Plasmid, 2003, Vol.49 (1), p.86-92</ispartof><rights>2002</rights><rights>Copyright 2002 Elsevier Science (USA)</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c361t-aea869bf4d3d389f5dd862755083e7a1b10a4b461cb3c461d909ddae3ffaf1a93</citedby><cites>FETCH-LOGICAL-c361t-aea869bf4d3d389f5dd862755083e7a1b10a4b461cb3c461d909ddae3ffaf1a93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0147-619X(02)00153-1$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3548,4021,27921,27922,27923,45993</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12584005$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Coombs, Justin T.</creatorcontrib><creatorcontrib>Franco, Christopher M.M.</creatorcontrib><creatorcontrib>Loria, Rosemary</creatorcontrib><title>Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp</title><title>Plasmid</title><addtitle>Plasmid</addtitle><description>A 12,855
bp cryptic plasmid was isolated from strains of an endophytic
Streptomyces sp. over a wide geographical area in South Australia. This plasmid was completely sequenced and 13 putative ORFs were identified. Two of the ORFs may be involved in the regulation of host plant genes. ORF7 exhibited homology to a plant transcriptional regulatory protein and ORF1 was a homolog of a plant protein synthesis initiation factor. The plasmid appears to use a novel transfer mechanism for a
Streptomyces plasmid. Pocks were detected during conjugative transfer and
kor but not
tra homologs could be identified. This structure and the sequence of the putative Kor protein are similar to the pFQ series of plasmids isolated from
Frankia, another endophytic actinomycete.</description><subject>Bacterial Proteins - genetics</subject><subject>Conjugation</subject><subject>Endophyte</subject><subject>kor</subject><subject>Molecular Sequence Data</subject><subject>Open Reading Frames</subject><subject>Plants - microbiology</subject><subject>Plasmids - genetics</subject><subject>Sequence analysis</subject><subject>Sequence Analysis, DNA</subject><subject>Streptomyces</subject><subject>Streptomyces - genetics</subject><subject>Streptomyces - isolation & purification</subject><issn>0147-619X</issn><issn>1095-9890</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE1v1DAQhi0EotvCT6DyCVGpgZk4ceITQqt-IFVwKEjcLMceg9skTu1spf33ZLurcuQwmssz8-p9GHuH8BEB5adbwKopJKpfH6A8A8BaFPiCrRBUXahWwUu2ekaO2HHOdwAgS5Sv2RGWdVsB1CtG6zhMPc3EMz1saLRh_M3N6JYx_TaHzKPn08W3sgE854aP8ZF6jqK47_jUmzwEx32Kw8JzGl2c_mznYPntnGia47C1lHme3rBX3vSZ3h72Cft5efFjfV3cfL_6uv5yU1ghcS4MmVaqzldOONEqXzvXyrKpa2gFNQY7BFN1lUTbCbssp0A5Z0h4bzwaJU7Y-_3fKcWlTZ71ELKlvjcjxU3WjQCBjdyB9R60KeacyOsphcGkrUbQO7_6ya_eydNQ6ie_Gpe700PAphvI_bs6CF2Az3uAlpqPgZLONixayYVEdtYuhv9E_AVqv4qi</recordid><startdate>2003</startdate><enddate>2003</enddate><creator>Coombs, Justin T.</creator><creator>Franco, Christopher M.M.</creator><creator>Loria, Rosemary</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>2003</creationdate><title>Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp</title><author>Coombs, Justin T. ; Franco, Christopher M.M. ; Loria, Rosemary</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c361t-aea869bf4d3d389f5dd862755083e7a1b10a4b461cb3c461d909ddae3ffaf1a93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Bacterial Proteins - genetics</topic><topic>Conjugation</topic><topic>Endophyte</topic><topic>kor</topic><topic>Molecular Sequence Data</topic><topic>Open Reading Frames</topic><topic>Plants - microbiology</topic><topic>Plasmids - genetics</topic><topic>Sequence analysis</topic><topic>Sequence Analysis, DNA</topic><topic>Streptomyces</topic><topic>Streptomyces - genetics</topic><topic>Streptomyces - isolation & purification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Coombs, Justin T.</creatorcontrib><creatorcontrib>Franco, Christopher M.M.</creatorcontrib><creatorcontrib>Loria, Rosemary</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Plasmid</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Coombs, Justin T.</au><au>Franco, Christopher M.M.</au><au>Loria, Rosemary</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp</atitle><jtitle>Plasmid</jtitle><addtitle>Plasmid</addtitle><date>2003</date><risdate>2003</risdate><volume>49</volume><issue>1</issue><spage>86</spage><epage>92</epage><pages>86-92</pages><issn>0147-619X</issn><eissn>1095-9890</eissn><abstract>A 12,855
bp cryptic plasmid was isolated from strains of an endophytic
Streptomyces sp. over a wide geographical area in South Australia. This plasmid was completely sequenced and 13 putative ORFs were identified. Two of the ORFs may be involved in the regulation of host plant genes. ORF7 exhibited homology to a plant transcriptional regulatory protein and ORF1 was a homolog of a plant protein synthesis initiation factor. The plasmid appears to use a novel transfer mechanism for a
Streptomyces plasmid. Pocks were detected during conjugative transfer and
kor but not
tra homologs could be identified. This structure and the sequence of the putative Kor protein are similar to the pFQ series of plasmids isolated from
Frankia, another endophytic actinomycete.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>12584005</pmid><doi>10.1016/S0147-619X(02)00153-1</doi><tpages>7</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0147-619X |
| ispartof | Plasmid, 2003, Vol.49 (1), p.86-92 |
| issn | 0147-619X 1095-9890 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_73031769 |
| source | MEDLINE; ScienceDirect Journals (5 years ago - present) |
| subjects | Bacterial Proteins - genetics Conjugation Endophyte kor Molecular Sequence Data Open Reading Frames Plants - microbiology Plasmids - genetics Sequence analysis Sequence Analysis, DNA Streptomyces Streptomyces - genetics Streptomyces - isolation & purification |
| title | Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-14T14%3A11%3A19IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Complete%20sequencing%20and%20analysis%20of%20pEN2701,%20a%20novel%2013-kb%20plasmid%20from%20an%20endophytic%20Streptomyces%20sp&rft.jtitle=Plasmid&rft.au=Coombs,%20Justin%20T.&rft.date=2003&rft.volume=49&rft.issue=1&rft.spage=86&rft.epage=92&rft.pages=86-92&rft.issn=0147-619X&rft.eissn=1095-9890&rft_id=info:doi/10.1016/S0147-619X(02)00153-1&rft_dat=%3Cproquest_cross%3E73031769%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=73031769&rft_id=info:pmid/12584005&rft_els_id=S0147619X02001531&rfr_iscdi=true |