DicodonUse: the programme for dicodon bias visualization in prokaryotes

DicodonUse: the programme for dicodon bias visualization in prokaryotes

The DicodonUse programme is aimed at a fast and simple assessment of genes present in prokaryotic nucleotide sequences. It identifies open reading frames that are not genes, and it distinguishes the genes that inherently belong to the genome in question from the genes that were inserted into the gen...

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Veröffentlicht in:Folia biologica 2002, Vol.48 (6), p.246-248
Hauptverfasser: Paces, J, Paces, V
Format: Artikel
Sprache:eng
Schlagworte:
Bacteria - genetics
Base Sequence
Genes, Bacterial
Molecular Sequence Data
Open Reading Frames
Prokaryotic Cells - physiology
Sequence Analysis, DNA - methods
Software
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Paces, V
description The DicodonUse programme is aimed at a fast and simple assessment of genes present in prokaryotic nucleotide sequences. It identifies open reading frames that are not genes, and it distinguishes the genes that inherently belong to the genome in question from the genes that were inserted into the genome in the course of evolution. The programme is based on frequencies of dicodons used by the organism.
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subjects Bacteria - genetics
Base Sequence
Genes, Bacterial
Molecular Sequence Data
Open Reading Frames
Prokaryotic Cells - physiology
Sequence Analysis, DNA - methods
Software
title DicodonUse: the programme for dicodon bias visualization in prokaryotes
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