Detection of Escherichia coli rRNA using target amplification and time-resolved fluorescence detection

The development of technology to increase the sensitivity and speed of detection of bacterial pathogens in samples is important for diagnosis and monitoring of illness. We have developed a sensitive and rapid method for the detection of bacteria, using Escherichia coli as a model, which combines tra...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Molecular and cellular probes 1991-12, Vol.5 (6), p.467-472
Hauptverfasser: Bush, Charlene E., Vanden Brink, Kurt M., Sherman, David G., Richard Peterson, W., Beninsig, Laura A., Godsey, James H.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 472
container_issue 6
container_start_page 467
container_title Molecular and cellular probes
container_volume 5
creator Bush, Charlene E.
Vanden Brink, Kurt M.
Sherman, David G.
Richard Peterson, W.
Beninsig, Laura A.
Godsey, James H.
description The development of technology to increase the sensitivity and speed of detection of bacterial pathogens in samples is important for diagnosis and monitoring of illness. We have developed a sensitive and rapid method for the detection of bacteria, using Escherichia coli as a model, which combines transcription-based target amplification with a bead-based sandwich hybridization assay using rare earth metal chelate labelled probes and time-resolved fluorescence detection. Using these methods as little as 100 copies (0·00016 attomoles) of purified native Escherichia coli rRNA or just one bacterial cell in a spiked sample could be detected. These results demonstrate that amplification of rRNA by transcription-based amplification and detection by time-resolved fluorescence provide a sensitive technology for the direct detection of micro-organisms without the requirement for prior cultivation.
doi_str_mv 10.1016/S0890-8508(05)80019-2
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_72629324</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0890850805800192</els_id><sourcerecordid>72629324</sourcerecordid><originalsourceid>FETCH-LOGICAL-c304t-ca3c3fb67193e1023bb03aedda114aa88c7e4d64f96ccba1598edd5f032bdc823</originalsourceid><addsrcrecordid>eNqFkE1P3DAQhq2Kii60PwHJB4TaQ8o4TrL2qUIUWiRUpH6cLWc8BldJvNgJUv99k90tPXKyrPeZd0YPYycCPgoQzfkPUBoKVYN6D_UHBSB0Ub5iKwG6KYTQ1QFbPSNv2FHOvwFAV6AO2aFYl7LSYsX8ZxoJxxAHHj2_yvhAKeBDsBxjF3j6_u2CTzkM93y06Z5GbvtNF3xAu52xg-Nj6KlIlGP3RI77borzB2lA4u5f-Vv22tsu07v9e8x-XV_9vPxa3N59ubm8uC1QQjUWaCVK3zZroSUJKGXbgrTknBWislYpXFPlmsrrBrG1otZqDmsPsmwdqlIes7Nd7ybFx4nyaPow39J1dqA4ZbMum1LLsprBegdiijkn8maTQm_THyPALH7N1q9Z5BmozdavWRac7BdMbU_u_9RO6Jyf7nOb0XY-2QFDfsZqEErVS82nHUazjKdAyWQMizIX0mzMuBheOOQvQX-ZDQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>72629324</pqid></control><display><type>article</type><title>Detection of Escherichia coli rRNA using target amplification and time-resolved fluorescence detection</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals</source><creator>Bush, Charlene E. ; Vanden Brink, Kurt M. ; Sherman, David G. ; Richard Peterson, W. ; Beninsig, Laura A. ; Godsey, James H.</creator><creatorcontrib>Bush, Charlene E. ; Vanden Brink, Kurt M. ; Sherman, David G. ; Richard Peterson, W. ; Beninsig, Laura A. ; Godsey, James H.</creatorcontrib><description>The development of technology to increase the sensitivity and speed of detection of bacterial pathogens in samples is important for diagnosis and monitoring of illness. We have developed a sensitive and rapid method for the detection of bacteria, using Escherichia coli as a model, which combines transcription-based target amplification with a bead-based sandwich hybridization assay using rare earth metal chelate labelled probes and time-resolved fluorescence detection. Using these methods as little as 100 copies (0·00016 attomoles) of purified native Escherichia coli rRNA or just one bacterial cell in a spiked sample could be detected. These results demonstrate that amplification of rRNA by transcription-based amplification and detection by time-resolved fluorescence provide a sensitive technology for the direct detection of micro-organisms without the requirement for prior cultivation.</description><identifier>ISSN: 0890-8508</identifier><identifier>EISSN: 1096-1194</identifier><identifier>DOI: 10.1016/S0890-8508(05)80019-2</identifier><identifier>PMID: 1723491</identifier><identifier>CODEN: MCPRE6</identifier><language>eng</language><publisher>Kidlington: Elsevier Ltd</publisher><subject>Bacteriological methods and techniques used in bacteriology ; Bacteriology ; Base Sequence ; Biological and medical sciences ; Escherichia coli ; Escherichia coli - isolation &amp; purification ; Fluorescent Dyes ; Fundamental and applied biological sciences. Psychology ; Humans ; Metals, Rare Earth ; Microbiology ; Microspheres ; Molecular Sequence Data ; Nucleic Acid Amplification Techniques ; Oligonucleotide Probes ; Polystyrenes ; RNA, Bacterial - genetics ; RNA, Bacterial - isolation &amp; purification ; RNA, Ribosomal - genetics ; RNA, Ribosomal - isolation &amp; purification ; Sensitivity and Specificity ; time-resolved fluorescence detection ; transcription-based amplification</subject><ispartof>Molecular and cellular probes, 1991-12, Vol.5 (6), p.467-472</ispartof><rights>1991 Academic Press Ltd.</rights><rights>1992 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c304t-ca3c3fb67193e1023bb03aedda114aa88c7e4d64f96ccba1598edd5f032bdc823</citedby><cites>FETCH-LOGICAL-c304t-ca3c3fb67193e1023bb03aedda114aa88c7e4d64f96ccba1598edd5f032bdc823</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0890850805800192$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=5018852$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/1723491$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bush, Charlene E.</creatorcontrib><creatorcontrib>Vanden Brink, Kurt M.</creatorcontrib><creatorcontrib>Sherman, David G.</creatorcontrib><creatorcontrib>Richard Peterson, W.</creatorcontrib><creatorcontrib>Beninsig, Laura A.</creatorcontrib><creatorcontrib>Godsey, James H.</creatorcontrib><title>Detection of Escherichia coli rRNA using target amplification and time-resolved fluorescence detection</title><title>Molecular and cellular probes</title><addtitle>Mol Cell Probes</addtitle><description>The development of technology to increase the sensitivity and speed of detection of bacterial pathogens in samples is important for diagnosis and monitoring of illness. We have developed a sensitive and rapid method for the detection of bacteria, using Escherichia coli as a model, which combines transcription-based target amplification with a bead-based sandwich hybridization assay using rare earth metal chelate labelled probes and time-resolved fluorescence detection. Using these methods as little as 100 copies (0·00016 attomoles) of purified native Escherichia coli rRNA or just one bacterial cell in a spiked sample could be detected. These results demonstrate that amplification of rRNA by transcription-based amplification and detection by time-resolved fluorescence provide a sensitive technology for the direct detection of micro-organisms without the requirement for prior cultivation.</description><subject>Bacteriological methods and techniques used in bacteriology</subject><subject>Bacteriology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Escherichia coli</subject><subject>Escherichia coli - isolation &amp; purification</subject><subject>Fluorescent Dyes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Humans</subject><subject>Metals, Rare Earth</subject><subject>Microbiology</subject><subject>Microspheres</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Amplification Techniques</subject><subject>Oligonucleotide Probes</subject><subject>Polystyrenes</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Bacterial - isolation &amp; purification</subject><subject>RNA, Ribosomal - genetics</subject><subject>RNA, Ribosomal - isolation &amp; purification</subject><subject>Sensitivity and Specificity</subject><subject>time-resolved fluorescence detection</subject><subject>transcription-based amplification</subject><issn>0890-8508</issn><issn>1096-1194</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1991</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE1P3DAQhq2Kii60PwHJB4TaQ8o4TrL2qUIUWiRUpH6cLWc8BldJvNgJUv99k90tPXKyrPeZd0YPYycCPgoQzfkPUBoKVYN6D_UHBSB0Ub5iKwG6KYTQ1QFbPSNv2FHOvwFAV6AO2aFYl7LSYsX8ZxoJxxAHHj2_yvhAKeBDsBxjF3j6_u2CTzkM93y06Z5GbvtNF3xAu52xg-Nj6KlIlGP3RI77borzB2lA4u5f-Vv22tsu07v9e8x-XV_9vPxa3N59ubm8uC1QQjUWaCVK3zZroSUJKGXbgrTknBWislYpXFPlmsrrBrG1otZqDmsPsmwdqlIes7Nd7ybFx4nyaPow39J1dqA4ZbMum1LLsprBegdiijkn8maTQm_THyPALH7N1q9Z5BmozdavWRac7BdMbU_u_9RO6Jyf7nOb0XY-2QFDfsZqEErVS82nHUazjKdAyWQMizIX0mzMuBheOOQvQX-ZDQ</recordid><startdate>199112</startdate><enddate>199112</enddate><creator>Bush, Charlene E.</creator><creator>Vanden Brink, Kurt M.</creator><creator>Sherman, David G.</creator><creator>Richard Peterson, W.</creator><creator>Beninsig, Laura A.</creator><creator>Godsey, James H.</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>199112</creationdate><title>Detection of Escherichia coli rRNA using target amplification and time-resolved fluorescence detection</title><author>Bush, Charlene E. ; Vanden Brink, Kurt M. ; Sherman, David G. ; Richard Peterson, W. ; Beninsig, Laura A. ; Godsey, James H.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c304t-ca3c3fb67193e1023bb03aedda114aa88c7e4d64f96ccba1598edd5f032bdc823</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1991</creationdate><topic>Bacteriological methods and techniques used in bacteriology</topic><topic>Bacteriology</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Escherichia coli</topic><topic>Escherichia coli - isolation &amp; purification</topic><topic>Fluorescent Dyes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Humans</topic><topic>Metals, Rare Earth</topic><topic>Microbiology</topic><topic>Microspheres</topic><topic>Molecular Sequence Data</topic><topic>Nucleic Acid Amplification Techniques</topic><topic>Oligonucleotide Probes</topic><topic>Polystyrenes</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Bacterial - isolation &amp; purification</topic><topic>RNA, Ribosomal - genetics</topic><topic>RNA, Ribosomal - isolation &amp; purification</topic><topic>Sensitivity and Specificity</topic><topic>time-resolved fluorescence detection</topic><topic>transcription-based amplification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bush, Charlene E.</creatorcontrib><creatorcontrib>Vanden Brink, Kurt M.</creatorcontrib><creatorcontrib>Sherman, David G.</creatorcontrib><creatorcontrib>Richard Peterson, W.</creatorcontrib><creatorcontrib>Beninsig, Laura A.</creatorcontrib><creatorcontrib>Godsey, James H.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular and cellular probes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bush, Charlene E.</au><au>Vanden Brink, Kurt M.</au><au>Sherman, David G.</au><au>Richard Peterson, W.</au><au>Beninsig, Laura A.</au><au>Godsey, James H.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detection of Escherichia coli rRNA using target amplification and time-resolved fluorescence detection</atitle><jtitle>Molecular and cellular probes</jtitle><addtitle>Mol Cell Probes</addtitle><date>1991-12</date><risdate>1991</risdate><volume>5</volume><issue>6</issue><spage>467</spage><epage>472</epage><pages>467-472</pages><issn>0890-8508</issn><eissn>1096-1194</eissn><coden>MCPRE6</coden><abstract>The development of technology to increase the sensitivity and speed of detection of bacterial pathogens in samples is important for diagnosis and monitoring of illness. We have developed a sensitive and rapid method for the detection of bacteria, using Escherichia coli as a model, which combines transcription-based target amplification with a bead-based sandwich hybridization assay using rare earth metal chelate labelled probes and time-resolved fluorescence detection. Using these methods as little as 100 copies (0·00016 attomoles) of purified native Escherichia coli rRNA or just one bacterial cell in a spiked sample could be detected. These results demonstrate that amplification of rRNA by transcription-based amplification and detection by time-resolved fluorescence provide a sensitive technology for the direct detection of micro-organisms without the requirement for prior cultivation.</abstract><cop>Kidlington</cop><pub>Elsevier Ltd</pub><pmid>1723491</pmid><doi>10.1016/S0890-8508(05)80019-2</doi><tpages>6</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0890-8508
ispartof Molecular and cellular probes, 1991-12, Vol.5 (6), p.467-472
issn 0890-8508
1096-1194
language eng
recordid cdi_proquest_miscellaneous_72629324
source MEDLINE; Elsevier ScienceDirect Journals
subjects Bacteriological methods and techniques used in bacteriology
Bacteriology
Base Sequence
Biological and medical sciences
Escherichia coli
Escherichia coli - isolation & purification
Fluorescent Dyes
Fundamental and applied biological sciences. Psychology
Humans
Metals, Rare Earth
Microbiology
Microspheres
Molecular Sequence Data
Nucleic Acid Amplification Techniques
Oligonucleotide Probes
Polystyrenes
RNA, Bacterial - genetics
RNA, Bacterial - isolation & purification
RNA, Ribosomal - genetics
RNA, Ribosomal - isolation & purification
Sensitivity and Specificity
time-resolved fluorescence detection
transcription-based amplification
title Detection of Escherichia coli rRNA using target amplification and time-resolved fluorescence detection
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-10T07%3A26%3A50IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Detection%20of%20Escherichia%20coli%20rRNA%20using%20target%20amplification%20and%20time-resolved%20fluorescence%20detection&rft.jtitle=Molecular%20and%20cellular%20probes&rft.au=Bush,%20Charlene%20E.&rft.date=1991-12&rft.volume=5&rft.issue=6&rft.spage=467&rft.epage=472&rft.pages=467-472&rft.issn=0890-8508&rft.eissn=1096-1194&rft.coden=MCPRE6&rft_id=info:doi/10.1016/S0890-8508(05)80019-2&rft_dat=%3Cproquest_cross%3E72629324%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=72629324&rft_id=info:pmid/1723491&rft_els_id=S0890850805800192&rfr_iscdi=true