DNA electrophoresis on a flat surface

We report a new approach for performing DNA electrophoresis. Using experimental studies and molecular dynamics simulations, we show that a perfectly flat silicon wafer, without any surface features, can be used to fractionate DNA in free solution. We determine that the ability of a flat surface to s...

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Veröffentlicht in:Physical review letters 2000-12, Vol.85 (26 Pt 1), p.5651-5654
Hauptverfasser: Pernodet, N, Samuilov, V, Shin, K, Sokolov, J, Rafailovich, M H, Gersappe, D, Chu, B
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container_end_page 5654
container_issue 26 Pt 1
container_start_page 5651
container_title Physical review letters
container_volume 85
creator Pernodet, N
Samuilov, V
Shin, K
Sokolov, J
Rafailovich, M H
Gersappe, D
Chu, B
description We report a new approach for performing DNA electrophoresis. Using experimental studies and molecular dynamics simulations, we show that a perfectly flat silicon wafer, without any surface features, can be used to fractionate DNA in free solution. We determine that the ability of a flat surface to separate DNA molecules results from the local friction between the surface and the adsorbed DNA segments. We control this friction by coating the Si surface with silane monolayer films and show that it is possible to systematically change the size range of DNA that can be separated.
doi_str_mv 10.1103/PhysRevLett.85.5651
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source MEDLINE; American Physical Society Journals
subjects Column chromatography
Computer simulation
DNA - chemistry
DNA - isolation & purification
Electrophoresis
Entropy
Fractionation
Interfacial energy
Microscopy, Atomic Force
Molecular dynamics
Molecules
Silicon wafers
Spectrometry, Fluorescence
Surface Properties
title DNA electrophoresis on a flat surface
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