A Survey of Flagellate Diversity at Four Deep-Sea Hydrothermal Vents in the Eastern Pacific Ocean Using Structural and Molecular Approaches

Eighteen strains of flagellated protists representing nine species were isolated and cultured from four deep-sea hydrothermal vents: Juan de Fuca Ridge (2,200 m), Guaymas Basin (2,000 m), 21° N (2,550 m) and 9° N (2,000 m). Light and electron microscopy were used to identify flagellates to genus and...

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Veröffentlicht in:The Journal of eukaryotic microbiology 2000-07, Vol.47 (4), p.400-411
Hauptverfasser: Atkins, Michael S, Teske, Andreas P, Anderson, O. Roger
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Teske, Andreas P
Anderson, O. Roger
description Eighteen strains of flagellated protists representing nine species were isolated and cultured from four deep-sea hydrothermal vents: Juan de Fuca Ridge (2,200 m), Guaymas Basin (2,000 m), 21° N (2,550 m) and 9° N (2,000 m). Light and electron microscopy were used to identify flagellates to genus and, when possible, species. The small subunit ribosomal RNA genes of each vent species and related strains from shallow-waters and the American Type Culture Collection were sequenced then used for comparative analysis with database sequences to place taxa in an rDNA tree. The hydrothermal vent flagellates belonged to six different taxonomic orders: the Ancyromonadida, Bicosoecida, Cercomonadida, Choanoflagellida, Chrysomonadida, and Kinetoplastida. Comparative analysis of vent isolate and database sequences resolved systematic placement of some well-known species with previously uncertain taxonomic affinities, such as Ancyromonas sigmoides, Caecitellus parvulus, and Massisteria marina. Many of these vent isolates are ubiquitous members of marine, freshwater, and terrestrial ecosystems worldwide, suggesting a global distribution of these flagellate species.
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Comparative analysis of vent isolate and database sequences resolved systematic placement of some well-known species with previously uncertain taxonomic affinities, such as Ancyromonas sigmoides, Caecitellus parvulus, and Massisteria marina. 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Roger</creatorcontrib><title>A Survey of Flagellate Diversity at Four Deep-Sea Hydrothermal Vents in the Eastern Pacific Ocean Using Structural and Molecular Approaches</title><title>The Journal of eukaryotic microbiology</title><addtitle>J Eukaryot Microbiol</addtitle><description>Eighteen strains of flagellated protists representing nine species were isolated and cultured from four deep-sea hydrothermal vents: Juan de Fuca Ridge (2,200 m), Guaymas Basin (2,000 m), 21° N (2,550 m) and 9° N (2,000 m). Light and electron microscopy were used to identify flagellates to genus and, when possible, species. The small subunit ribosomal RNA genes of each vent species and related strains from shallow-waters and the American Type Culture Collection were sequenced then used for comparative analysis with database sequences to place taxa in an rDNA tree. 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Psychology</subject><subject>Genes, rRNA - genetics</subject><subject>Genetic Variation</subject><subject>Kinetoplastida</subject><subject>Microscopy, Electron</subject><subject>Molecular Sequence Data</subject><subject>Polymerase Chain Reaction</subject><subject>Protozoa</subject><subject>RNA, Ribosomal, 18S - genetics</subject><subject>Seawater - parasitology</subject><subject>Sequence Analysis, DNA</subject><subject>Systematics. Geographical distribution. Morphology. 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Roger</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b5520-f673761f0416d6030d287899d3f5da5f04e974a680e98e25c34c1850b52a14543</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>18S rDNA</topic><topic>Ancyromonadida</topic><topic>Animals</topic><topic>Bicosoecida</topic><topic>Biological and medical sciences</topic><topic>Cercomonadida</topic><topic>Choanoflagellida</topic><topic>Chrysomonadida</topic><topic>Culture Media</topic><topic>DNA, Ribosomal - analysis</topic><topic>Ecosystem</topic><topic>Eukaryota - classification</topic><topic>Eukaryota - genetics</topic><topic>Eukaryota - growth &amp; development</topic><topic>Eukaryota - isolation &amp; purification</topic><topic>Eukaryota - ultrastructure</topic><topic>extreme environment</topic><topic>Fundamental and applied biological sciences. 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Roger</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Survey of Flagellate Diversity at Four Deep-Sea Hydrothermal Vents in the Eastern Pacific Ocean Using Structural and Molecular Approaches</atitle><jtitle>The Journal of eukaryotic microbiology</jtitle><addtitle>J Eukaryot Microbiol</addtitle><date>2000-07</date><risdate>2000</risdate><volume>47</volume><issue>4</issue><spage>400</spage><epage>411</epage><pages>400-411</pages><issn>1066-5234</issn><eissn>1550-7408</eissn><coden>JEMIED</coden><abstract>Eighteen strains of flagellated protists representing nine species were isolated and cultured from four deep-sea hydrothermal vents: Juan de Fuca Ridge (2,200 m), Guaymas Basin (2,000 m), 21° N (2,550 m) and 9° N (2,000 m). Light and electron microscopy were used to identify flagellates to genus and, when possible, species. 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subjects 18S rDNA
Ancyromonadida
Animals
Bicosoecida
Biological and medical sciences
Cercomonadida
Choanoflagellida
Chrysomonadida
Culture Media
DNA, Ribosomal - analysis
Ecosystem
Eukaryota - classification
Eukaryota - genetics
Eukaryota - growth & development
Eukaryota - isolation & purification
Eukaryota - ultrastructure
extreme environment
Fundamental and applied biological sciences. Psychology
Genes, rRNA - genetics
Genetic Variation
Kinetoplastida
Microscopy, Electron
Molecular Sequence Data
Polymerase Chain Reaction
Protozoa
RNA, Ribosomal, 18S - genetics
Seawater - parasitology
Sequence Analysis, DNA
Systematics. Geographical distribution. Morphology. Cytology
Temperature
title A Survey of Flagellate Diversity at Four Deep-Sea Hydrothermal Vents in the Eastern Pacific Ocean Using Structural and Molecular Approaches
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