A new HLA-Cw allele (Cw0808) found in a Colombian Mestizo individual possibly generated by an intralocus/interloci gene conversion
Seven different HLA-Cw*08 (Cw*0801-*0807) alleles have been described to date (Bodmer et al. 1999; Marsh 2000). HLA-Cw*0801 and Cw*0803 are mainly present in American Indians and Orientals (Belich et al. 1992; Parham et al. 1989); Cw*0802 shows a Caucasoid distribution (Parham et al. 1989); Cw*0804...
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description | Seven different HLA-Cw*08 (Cw*0801-*0807) alleles have been described to date (Bodmer et al. 1999; Marsh 2000). HLA-Cw*0801 and Cw*0803 are mainly present in American Indians and Orientals (Belich et al. 1992; Parham et al. 1989); Cw*0802 shows a Caucasoid distribution (Parham et al. 1989); Cw*0804 was found in Negroid and Hispanic individuals (Turner et al. 1998); Cw*0806 was described in American Indians, and Cw*0805 and Cw*0807 have an undetermined origin (http://www.anthonynolan.com/HIG). The frequency of Cw*08 is still poorly studies among populations, but it has been reported in 4.5% of Ticuna Indians from Brazil-Colombia, and 8.7% of the Venezuelan-Mestizo population (Petzl-Erler et al. 1997). In the present study, a new Cw*08 subtype is described in a 40-year-old healthy Colombian Mestizo born in Barranquilla City (north coast of Colombia). Nowadays, Colombia has a complex ethnicity, which is composed of mostly Mestizo groups and (to a lesser degree) of Ameridian and Mulatto groups. Most first Ameridian inhabitants were chibchan and smaller groups of Achagua, Aymara, Arawak, Carib, Quechua, Tupi-Guarani and Yaramangui also existed. A greater prevalence of the Mulatto groups (African American) has been found in both the Atlantic and Pacific coasts, and have mainly contributed to the genetic background of the coastal people; Arango and Sanchez 1988; Gutierrez 1986). The individual carrying the novel Cw*0808 allele showed the following HLA DNA-typing: A*0222, A*2902/Cw*0808, Cw*0802/B*1510, B*4801/DRB1*0407, DRB1*1102/DQB1*0302, DQB1*0301. Typing of his two children determined the following haplotypes: A*0222-Cw*0808-B*4801-DRB1*0407-DQB1*0302 and A*2902-Cw*0802-B*1510-DRB1*1102-DQB1*0301. |
doi_str_mv | 10.1007/s002510000238 |
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HLA-Cw*0801 and Cw*0803 are mainly present in American Indians and Orientals (Belich et al. 1992; Parham et al. 1989); Cw*0802 shows a Caucasoid distribution (Parham et al. 1989); Cw*0804 was found in Negroid and Hispanic individuals (Turner et al. 1998); Cw*0806 was described in American Indians, and Cw*0805 and Cw*0807 have an undetermined origin (http://www.anthonynolan.com/HIG). The frequency of Cw*08 is still poorly studies among populations, but it has been reported in 4.5% of Ticuna Indians from Brazil-Colombia, and 8.7% of the Venezuelan-Mestizo population (Petzl-Erler et al. 1997). In the present study, a new Cw*08 subtype is described in a 40-year-old healthy Colombian Mestizo born in Barranquilla City (north coast of Colombia). Nowadays, Colombia has a complex ethnicity, which is composed of mostly Mestizo groups and (to a lesser degree) of Ameridian and Mulatto groups. Most first Ameridian inhabitants were chibchan and smaller groups of Achagua, Aymara, Arawak, Carib, Quechua, Tupi-Guarani and Yaramangui also existed. A greater prevalence of the Mulatto groups (African American) has been found in both the Atlantic and Pacific coasts, and have mainly contributed to the genetic background of the coastal people; Arango and Sanchez 1988; Gutierrez 1986). The individual carrying the novel Cw*0808 allele showed the following HLA DNA-typing: A*0222, A*2902/Cw*0808, Cw*0802/B*1510, B*4801/DRB1*0407, DRB1*1102/DQB1*0302, DQB1*0301. Typing of his two children determined the following haplotypes: A*0222-Cw*0808-B*4801-DRB1*0407-DQB1*0302 and A*2902-Cw*0802-B*1510-DRB1*1102-DQB1*0301.</description><identifier>ISSN: 0093-7711</identifier><identifier>EISSN: 1432-1211</identifier><identifier>DOI: 10.1007/s002510000238</identifier><identifier>PMID: 11061291</identifier><language>eng</language><publisher>United States</publisher><subject>Adult ; Alleles ; Base Sequence ; Colombia ; DNA - genetics ; Exons ; Gene Conversion ; histocompatibility locus HLA ; HLA-C Antigens - chemistry ; HLA-C Antigens - genetics ; HLA-Cw gene ; Humans ; Indians, South American - genetics ; Introns ; Male ; Models, Molecular ; Molecular Sequence Data ; population studies ; Sequence Homology, Nucleic Acid</subject><ispartof>Immunogenetics (New York), 2000-10, Vol.51 (12), p.1053-1057</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c320t-fef6c820e71065b7a40c3b2cd3649ae97b41110199bdbc82ba91507080e57eac3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11061291$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Silvera-Redondo, C</creatorcontrib><creatorcontrib>Gomez-Casado, E</creatorcontrib><creatorcontrib>Martinez-Laso, J</creatorcontrib><creatorcontrib>Egea, E</creatorcontrib><creatorcontrib>Garavito, G</creatorcontrib><creatorcontrib>Varela, P</creatorcontrib><creatorcontrib>Pacho, A</creatorcontrib><creatorcontrib>Moscoso, J</creatorcontrib><creatorcontrib>Rubio, I</creatorcontrib><creatorcontrib>Arnaiz-Villena, A</creatorcontrib><title>A new HLA-Cw allele (Cw0808) found in a Colombian Mestizo individual possibly generated by an intralocus/interloci gene conversion</title><title>Immunogenetics (New York)</title><addtitle>Immunogenetics</addtitle><description>Seven different HLA-Cw*08 (Cw*0801-*0807) alleles have been described to date (Bodmer et al. 1999; Marsh 2000). HLA-Cw*0801 and Cw*0803 are mainly present in American Indians and Orientals (Belich et al. 1992; Parham et al. 1989); Cw*0802 shows a Caucasoid distribution (Parham et al. 1989); Cw*0804 was found in Negroid and Hispanic individuals (Turner et al. 1998); Cw*0806 was described in American Indians, and Cw*0805 and Cw*0807 have an undetermined origin (http://www.anthonynolan.com/HIG). The frequency of Cw*08 is still poorly studies among populations, but it has been reported in 4.5% of Ticuna Indians from Brazil-Colombia, and 8.7% of the Venezuelan-Mestizo population (Petzl-Erler et al. 1997). In the present study, a new Cw*08 subtype is described in a 40-year-old healthy Colombian Mestizo born in Barranquilla City (north coast of Colombia). Nowadays, Colombia has a complex ethnicity, which is composed of mostly Mestizo groups and (to a lesser degree) of Ameridian and Mulatto groups. Most first Ameridian inhabitants were chibchan and smaller groups of Achagua, Aymara, Arawak, Carib, Quechua, Tupi-Guarani and Yaramangui also existed. A greater prevalence of the Mulatto groups (African American) has been found in both the Atlantic and Pacific coasts, and have mainly contributed to the genetic background of the coastal people; Arango and Sanchez 1988; Gutierrez 1986). The individual carrying the novel Cw*0808 allele showed the following HLA DNA-typing: A*0222, A*2902/Cw*0808, Cw*0802/B*1510, B*4801/DRB1*0407, DRB1*1102/DQB1*0302, DQB1*0301. Typing of his two children determined the following haplotypes: A*0222-Cw*0808-B*4801-DRB1*0407-DQB1*0302 and A*2902-Cw*0802-B*1510-DRB1*1102-DQB1*0301.</description><subject>Adult</subject><subject>Alleles</subject><subject>Base Sequence</subject><subject>Colombia</subject><subject>DNA - genetics</subject><subject>Exons</subject><subject>Gene Conversion</subject><subject>histocompatibility locus HLA</subject><subject>HLA-C Antigens - chemistry</subject><subject>HLA-C Antigens - genetics</subject><subject>HLA-Cw gene</subject><subject>Humans</subject><subject>Indians, South American - genetics</subject><subject>Introns</subject><subject>Male</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>population studies</subject><subject>Sequence Homology, Nucleic Acid</subject><issn>0093-7711</issn><issn>1432-1211</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUGLFDEQhYMo7rh69Co5iR56tyrp7kyOQ6PuwogXPTdJuloimWRMpneYPfrLje6A7MlTPYqPR716jL1GuEIAdV0ARFdVHXL9hK2wlaJBgfiUrQC0bJRCvGAvSvkBgJ0W_XN2gQg9Co0r9mvDIx35zXbTDEduQqBA_N1whDWs3_M5LXHiPnLDhxTSznoT-WcqB3-f6nryd35aTOD7VIq34cS_U6RsDjRxe-KV9fGQTUhuKddVUq7S_4W4S_GOcvEpvmTPZhMKvTrPS_bt44evw02z_fLpdthsGycFHJqZ5t6tBZCqx3dWmRactMJNsm-1Ia1sizUXam0nW0FrNHagahDqFBknL9nbB999Tj-XGmLc-eIoBBMpLWVUQmpou_a_ICole9V3FWweQJfrAzLN4z77ncmnEWH80874qJ3KvzkbL3ZH0z_6XIf8DZ_GiXk</recordid><startdate>20001001</startdate><enddate>20001001</enddate><creator>Silvera-Redondo, C</creator><creator>Gomez-Casado, E</creator><creator>Martinez-Laso, J</creator><creator>Egea, E</creator><creator>Garavito, G</creator><creator>Varela, P</creator><creator>Pacho, A</creator><creator>Moscoso, J</creator><creator>Rubio, I</creator><creator>Arnaiz-Villena, A</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20001001</creationdate><title>A new HLA-Cw allele (Cw0808) found in a Colombian Mestizo individual possibly generated by an intralocus/interloci gene conversion</title><author>Silvera-Redondo, C ; Gomez-Casado, E ; Martinez-Laso, J ; Egea, E ; Garavito, G ; Varela, P ; Pacho, A ; Moscoso, J ; Rubio, I ; Arnaiz-Villena, A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c320t-fef6c820e71065b7a40c3b2cd3649ae97b41110199bdbc82ba91507080e57eac3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Adult</topic><topic>Alleles</topic><topic>Base Sequence</topic><topic>Colombia</topic><topic>DNA - genetics</topic><topic>Exons</topic><topic>Gene Conversion</topic><topic>histocompatibility locus HLA</topic><topic>HLA-C Antigens - chemistry</topic><topic>HLA-C Antigens - genetics</topic><topic>HLA-Cw gene</topic><topic>Humans</topic><topic>Indians, South American - genetics</topic><topic>Introns</topic><topic>Male</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>population studies</topic><topic>Sequence Homology, Nucleic Acid</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Silvera-Redondo, C</creatorcontrib><creatorcontrib>Gomez-Casado, E</creatorcontrib><creatorcontrib>Martinez-Laso, J</creatorcontrib><creatorcontrib>Egea, E</creatorcontrib><creatorcontrib>Garavito, G</creatorcontrib><creatorcontrib>Varela, P</creatorcontrib><creatorcontrib>Pacho, A</creatorcontrib><creatorcontrib>Moscoso, J</creatorcontrib><creatorcontrib>Rubio, I</creatorcontrib><creatorcontrib>Arnaiz-Villena, A</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Immunogenetics (New York)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Silvera-Redondo, C</au><au>Gomez-Casado, E</au><au>Martinez-Laso, J</au><au>Egea, E</au><au>Garavito, G</au><au>Varela, P</au><au>Pacho, A</au><au>Moscoso, J</au><au>Rubio, I</au><au>Arnaiz-Villena, A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A new HLA-Cw allele (Cw0808) found in a Colombian Mestizo individual possibly generated by an intralocus/interloci gene conversion</atitle><jtitle>Immunogenetics (New York)</jtitle><addtitle>Immunogenetics</addtitle><date>2000-10-01</date><risdate>2000</risdate><volume>51</volume><issue>12</issue><spage>1053</spage><epage>1057</epage><pages>1053-1057</pages><issn>0093-7711</issn><eissn>1432-1211</eissn><abstract>Seven different HLA-Cw*08 (Cw*0801-*0807) alleles have been described to date (Bodmer et al. 1999; Marsh 2000). HLA-Cw*0801 and Cw*0803 are mainly present in American Indians and Orientals (Belich et al. 1992; Parham et al. 1989); Cw*0802 shows a Caucasoid distribution (Parham et al. 1989); Cw*0804 was found in Negroid and Hispanic individuals (Turner et al. 1998); Cw*0806 was described in American Indians, and Cw*0805 and Cw*0807 have an undetermined origin (http://www.anthonynolan.com/HIG). The frequency of Cw*08 is still poorly studies among populations, but it has been reported in 4.5% of Ticuna Indians from Brazil-Colombia, and 8.7% of the Venezuelan-Mestizo population (Petzl-Erler et al. 1997). In the present study, a new Cw*08 subtype is described in a 40-year-old healthy Colombian Mestizo born in Barranquilla City (north coast of Colombia). Nowadays, Colombia has a complex ethnicity, which is composed of mostly Mestizo groups and (to a lesser degree) of Ameridian and Mulatto groups. Most first Ameridian inhabitants were chibchan and smaller groups of Achagua, Aymara, Arawak, Carib, Quechua, Tupi-Guarani and Yaramangui also existed. A greater prevalence of the Mulatto groups (African American) has been found in both the Atlantic and Pacific coasts, and have mainly contributed to the genetic background of the coastal people; Arango and Sanchez 1988; Gutierrez 1986). The individual carrying the novel Cw*0808 allele showed the following HLA DNA-typing: A*0222, A*2902/Cw*0808, Cw*0802/B*1510, B*4801/DRB1*0407, DRB1*1102/DQB1*0302, DQB1*0301. Typing of his two children determined the following haplotypes: A*0222-Cw*0808-B*4801-DRB1*0407-DQB1*0302 and A*2902-Cw*0802-B*1510-DRB1*1102-DQB1*0301.</abstract><cop>United States</cop><pmid>11061291</pmid><doi>10.1007/s002510000238</doi><tpages>5</tpages></addata></record> |
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subjects | Adult Alleles Base Sequence Colombia DNA - genetics Exons Gene Conversion histocompatibility locus HLA HLA-C Antigens - chemistry HLA-C Antigens - genetics HLA-Cw gene Humans Indians, South American - genetics Introns Male Models, Molecular Molecular Sequence Data population studies Sequence Homology, Nucleic Acid |
title | A new HLA-Cw allele (Cw0808) found in a Colombian Mestizo individual possibly generated by an intralocus/interloci gene conversion |
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