Impact of Area and Sire by Herd Interaction on Heritability Estimates for Somatic Cell Count in Italian Holstein Friesian Cows
The aim of the paper was to estimate variance components for somatic cell scores for Italian Holsteins using data from three different areas of the country. A total of 2,202,804 first-parity test-day records, collected from 1990 to 1997 in three areas of Italy (Mantova, Milano, and Parmigiano cheese...
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description | The aim of the paper was to estimate variance components for somatic cell scores for Italian Holsteins using data from three different areas of the country. A total of 2,202,804 first-parity test-day records, collected from 1990 to 1997 in three areas of Italy (Mantova, Milano, and Parmigiano cheese area), were available for study. The areas differ in herd size, feeding systems and especially in milk use. A minimum standard of quality is also required by some specific methods of cheese production, as for example from the Parmigiano Reggiano cheese chain. These reasons, taken together, affect the attention given to the quality of milk production in herds, and, therefore, to the sanitation levels.
A pedigree file was extracted from the national database of Holstein Friesian breed. For computational reasons, eight samples of the data were extracted per area. Variance components were estimated by sample using two different test-day repeatability models. The first model included fixed effects of herd-test date, days in milk (30-d intervals) and calving month, and random effects of permanent environment, additive genetic and residual error. Estimated heritabilities in the first model ranged from 0.06 to 0.09 and repeatabilities from 0.36 to 0.45. Only small differences were detected among areas. In the second model, a random sire x herd interaction effect was added. Including the sire x herd effect resulted in heritability estimates ranging between 0.05 and 0.08 and repeatabilities from 0.35 to 0.45. The analysis revealed that only a small fraction of the total variance (0.35 to 1.5%) could be explained by sire x herd interaction effect. Based on this research, it appears that parameter estimates for somatic cell count do not differ by region, and inclusion of a sire x herd interaction effect is unnecessary. |
doi_str_mv | 10.3168/jds.S0022-0302(01)74708-X |
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A pedigree file was extracted from the national database of Holstein Friesian breed. For computational reasons, eight samples of the data were extracted per area. Variance components were estimated by sample using two different test-day repeatability models. The first model included fixed effects of herd-test date, days in milk (30-d intervals) and calving month, and random effects of permanent environment, additive genetic and residual error. Estimated heritabilities in the first model ranged from 0.06 to 0.09 and repeatabilities from 0.36 to 0.45. Only small differences were detected among areas. In the second model, a random sire x herd interaction effect was added. Including the sire x herd effect resulted in heritability estimates ranging between 0.05 and 0.08 and repeatabilities from 0.35 to 0.45. The analysis revealed that only a small fraction of the total variance (0.35 to 1.5%) could be explained by sire x herd interaction effect. Based on this research, it appears that parameter estimates for somatic cell count do not differ by region, and inclusion of a sire x herd interaction effect is unnecessary.</description><identifier>ISSN: 0022-0302</identifier><identifier>EISSN: 1525-3198</identifier><identifier>DOI: 10.3168/jds.S0022-0302(01)74708-X</identifier><identifier>PMID: 11768099</identifier><identifier>CODEN: JDSCAE</identifier><language>eng</language><publisher>Savoy, IL: Elsevier Inc</publisher><subject>Animal productions ; Animals ; Biological and medical sciences ; Cattle - genetics ; Cattle - physiology ; Cell Count ; Female ; Fundamental and applied biological sciences. Psychology ; Holstein Friesian ; Italy ; Lactation ; Male ; Mastitis, Bovine - genetics ; Milk - cytology ; Milk - metabolism ; Milk - standards ; Models, Genetic ; Parity ; sire × herd interaction ; somatic cell count ; Terrestrial animal productions ; Vertebrates</subject><ispartof>Journal of dairy science, 2001-11, Vol.84 (11), p.2555-2559</ispartof><rights>2001 American Dairy Science Association</rights><rights>2002 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c486t-b3263204b86cf8c8b12ddd4141ac1cefaee608603dc752897bf5df7cfb7ba3053</citedby><cites>FETCH-LOGICAL-c486t-b3263204b86cf8c8b12ddd4141ac1cefaee608603dc752897bf5df7cfb7ba3053</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.3168/jds.S0022-0302(01)74708-X$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14144338$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11768099$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Samoré, A.B.</creatorcontrib><creatorcontrib>Van Arendonk, J.A.M.</creatorcontrib><creatorcontrib>Groen, A.F.</creatorcontrib><title>Impact of Area and Sire by Herd Interaction on Heritability Estimates for Somatic Cell Count in Italian Holstein Friesian Cows</title><title>Journal of dairy science</title><addtitle>J Dairy Sci</addtitle><description>The aim of the paper was to estimate variance components for somatic cell scores for Italian Holsteins using data from three different areas of the country. A total of 2,202,804 first-parity test-day records, collected from 1990 to 1997 in three areas of Italy (Mantova, Milano, and Parmigiano cheese area), were available for study. The areas differ in herd size, feeding systems and especially in milk use. A minimum standard of quality is also required by some specific methods of cheese production, as for example from the Parmigiano Reggiano cheese chain. These reasons, taken together, affect the attention given to the quality of milk production in herds, and, therefore, to the sanitation levels.
A pedigree file was extracted from the national database of Holstein Friesian breed. For computational reasons, eight samples of the data were extracted per area. Variance components were estimated by sample using two different test-day repeatability models. The first model included fixed effects of herd-test date, days in milk (30-d intervals) and calving month, and random effects of permanent environment, additive genetic and residual error. Estimated heritabilities in the first model ranged from 0.06 to 0.09 and repeatabilities from 0.36 to 0.45. Only small differences were detected among areas. In the second model, a random sire x herd interaction effect was added. Including the sire x herd effect resulted in heritability estimates ranging between 0.05 and 0.08 and repeatabilities from 0.35 to 0.45. The analysis revealed that only a small fraction of the total variance (0.35 to 1.5%) could be explained by sire x herd interaction effect. Based on this research, it appears that parameter estimates for somatic cell count do not differ by region, and inclusion of a sire x herd interaction effect is unnecessary.</description><subject>Animal productions</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>Cattle - genetics</subject><subject>Cattle - physiology</subject><subject>Cell Count</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Holstein Friesian</subject><subject>Italy</subject><subject>Lactation</subject><subject>Male</subject><subject>Mastitis, Bovine - genetics</subject><subject>Milk - cytology</subject><subject>Milk - metabolism</subject><subject>Milk - standards</subject><subject>Models, Genetic</subject><subject>Parity</subject><subject>sire × herd interaction</subject><subject>somatic cell count</subject><subject>Terrestrial animal productions</subject><subject>Vertebrates</subject><issn>0022-0302</issn><issn>1525-3198</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkctu1DAUhiMEotPCKyCzgMIixZdcnGUVtXSkSiwGpO4sxz6mrpJ4sD1Us-HZOemM6BbJkn2Ovv9cfhfFe0YvBGvklwebLjaUcl5SQfknyj63VUtlefeiWLGa16VgnXxZrP4hJ8VpSg8YMk7r18UJY20jadetij_raatNJsGRywia6NmSjY9Ahj25gWjJes4QkfBhJngw57Me_Ojznlyl7CedIREXItkEfHtDehhH0ofdnImfyTrr0WsUhjFlwMR19JCWTB8e05vildNjgrfH-6z4cX31vb8pb799XfeXt6WpZJPLQfBGcFoNsjFOGjkwbq2tWMW0YQacBmiobKiwpq257NrB1da1xg3toAWtxVnx8VB3G8OvHaSsJp8MDqpnCLukWi5aRkWHYHcATQwpRXBqG3HHuFeMqsV8hearJ_PV4qyiTD2Zr-5Q--7YZDdMYJ-VR7cR-HAEdDJ6dFHPxqdnDheqhJDInR-4e__z_hF_Q6VJjyOWZUt7WWFJxet62as_kIDm_fYQVTIeZgMWVSYrG_x_DP4Xz26ysQ</recordid><startdate>20011101</startdate><enddate>20011101</enddate><creator>Samoré, A.B.</creator><creator>Van Arendonk, J.A.M.</creator><creator>Groen, A.F.</creator><general>Elsevier Inc</general><general>Am Dairy Sci Assoc</general><general>American Dairy Science Association</general><scope>6I.</scope><scope>AAFTH</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20011101</creationdate><title>Impact of Area and Sire by Herd Interaction on Heritability Estimates for Somatic Cell Count in Italian Holstein Friesian Cows</title><author>Samoré, A.B. ; Van Arendonk, J.A.M. ; Groen, A.F.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c486t-b3263204b86cf8c8b12ddd4141ac1cefaee608603dc752897bf5df7cfb7ba3053</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Animal productions</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>Cattle - genetics</topic><topic>Cattle - physiology</topic><topic>Cell Count</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Holstein Friesian</topic><topic>Italy</topic><topic>Lactation</topic><topic>Male</topic><topic>Mastitis, Bovine - genetics</topic><topic>Milk - cytology</topic><topic>Milk - metabolism</topic><topic>Milk - standards</topic><topic>Models, Genetic</topic><topic>Parity</topic><topic>sire × herd interaction</topic><topic>somatic cell count</topic><topic>Terrestrial animal productions</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Samoré, A.B.</creatorcontrib><creatorcontrib>Van Arendonk, J.A.M.</creatorcontrib><creatorcontrib>Groen, A.F.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of dairy science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Samoré, A.B.</au><au>Van Arendonk, J.A.M.</au><au>Groen, A.F.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Impact of Area and Sire by Herd Interaction on Heritability Estimates for Somatic Cell Count in Italian Holstein Friesian Cows</atitle><jtitle>Journal of dairy science</jtitle><addtitle>J Dairy Sci</addtitle><date>2001-11-01</date><risdate>2001</risdate><volume>84</volume><issue>11</issue><spage>2555</spage><epage>2559</epage><pages>2555-2559</pages><issn>0022-0302</issn><eissn>1525-3198</eissn><coden>JDSCAE</coden><abstract>The aim of the paper was to estimate variance components for somatic cell scores for Italian Holsteins using data from three different areas of the country. A total of 2,202,804 first-parity test-day records, collected from 1990 to 1997 in three areas of Italy (Mantova, Milano, and Parmigiano cheese area), were available for study. The areas differ in herd size, feeding systems and especially in milk use. A minimum standard of quality is also required by some specific methods of cheese production, as for example from the Parmigiano Reggiano cheese chain. These reasons, taken together, affect the attention given to the quality of milk production in herds, and, therefore, to the sanitation levels.
A pedigree file was extracted from the national database of Holstein Friesian breed. For computational reasons, eight samples of the data were extracted per area. Variance components were estimated by sample using two different test-day repeatability models. The first model included fixed effects of herd-test date, days in milk (30-d intervals) and calving month, and random effects of permanent environment, additive genetic and residual error. Estimated heritabilities in the first model ranged from 0.06 to 0.09 and repeatabilities from 0.36 to 0.45. Only small differences were detected among areas. In the second model, a random sire x herd interaction effect was added. Including the sire x herd effect resulted in heritability estimates ranging between 0.05 and 0.08 and repeatabilities from 0.35 to 0.45. The analysis revealed that only a small fraction of the total variance (0.35 to 1.5%) could be explained by sire x herd interaction effect. Based on this research, it appears that parameter estimates for somatic cell count do not differ by region, and inclusion of a sire x herd interaction effect is unnecessary.</abstract><cop>Savoy, IL</cop><pub>Elsevier Inc</pub><pmid>11768099</pmid><doi>10.3168/jds.S0022-0302(01)74708-X</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animal productions Animals Biological and medical sciences Cattle - genetics Cattle - physiology Cell Count Female Fundamental and applied biological sciences. Psychology Holstein Friesian Italy Lactation Male Mastitis, Bovine - genetics Milk - cytology Milk - metabolism Milk - standards Models, Genetic Parity sire × herd interaction somatic cell count Terrestrial animal productions Vertebrates |
title | Impact of Area and Sire by Herd Interaction on Heritability Estimates for Somatic Cell Count in Italian Holstein Friesian Cows |
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