Catalog of 258 single-nucleotide polymorphisms (SNPs) in genes encoding three organic anion transporters, three organic anion-transporting polypeptides, and three NADH:ubiquinone oxidoreductase flavoproteins

We present here a series of high-density maps of single-nucleotide polymorphisms (SNPs) detected in genes encoding three organic-anion transporters, three organic anion-transporting polypeptides, and three nicotinamide adenine dinucleotide, reduced:ubiquinone oxidoreductase flavoproteins. A total of...

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Veröffentlicht in:Journal of human genetics 2001-01, Vol.46 (11), p.668-683
Hauptverfasser: Iida, A., Saito, S., Sekine, A., Mishima, C., Kondo, K., Kitamura, Y., Harigae, S., Osawa, S., Nakamura, Y.
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container_end_page 683
container_issue 11
container_start_page 668
container_title Journal of human genetics
container_volume 46
creator Iida, A.
Saito, S.
Sekine, A.
Mishima, C.
Kondo, K.
Kitamura, Y.
Harigae, S.
Osawa, S.
Nakamura, Y.
description We present here a series of high-density maps of single-nucleotide polymorphisms (SNPs) detected in genes encoding three organic-anion transporters, three organic anion-transporting polypeptides, and three nicotinamide adenine dinucleotide, reduced:ubiquinone oxidoreductase flavoproteins. A total of 258 SNPs were identified among these nine genes through systematic screening of DNA from 48 Japanese individuals: 17 in 5′ flanking regions, three in 5′ untranslated regions, 13 in coding regions, 211 in introns, six in 3′ untranslated regions, and 8 in 3′ flanking regions. By comparing our data with SNPs deposited in the dbSNP database in the National Center for Biotechnology Information, we determined that 236 (91.5%) were novel. In addition, 46 genetic variations of other types were discovered within these loci. These high-resolution maps will serve as a useful resource for analyzing potential associations between variations in these nine genes and differences in human susceptibilities to common diseases or response to drug therapies.
doi_str_mv 10.1007/s100380170019
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subjects 3' Untranslated regions
5' Untranslated Regions
Adenine
Biomedical and Life Sciences
Biomedicine
Biotechnology
Chromosome Mapping
DNA - blood
DNA - isolation & purification
Drug therapy
Electron Transport Complex I
European Continental Ancestry Group - genetics
Exons
Flavoproteins
Flavoproteins - genetics
Gene Expression
Gene Function
Gene mapping
Gene Therapy
Genetic diversity
Human Genetics
Humans
Introns
Ions
Japan
Molecular Medicine
Multigene Family
NAD
NADH
NADH, NADPH Oxidoreductases - genetics
NADH-ubiquinone oxidoreductase
Organic Anion Transporters - genetics
Organic Anion Transporters, Sodium-Independent
Original Article
Polymorphism, Single Nucleotide - genetics
Polypeptides
Single-nucleotide polymorphism
Solute Carrier Organic Anion Transporter Family Member 1b1 - genetics
Ubiquinone
Ubiquinone oxidoreductase
title Catalog of 258 single-nucleotide polymorphisms (SNPs) in genes encoding three organic anion transporters, three organic anion-transporting polypeptides, and three NADH:ubiquinone oxidoreductase flavoproteins
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