'Candidatus phytoplasma castaneae', a novel phytoplasma taxon associated with chestnut witches' broom disease
In Korea, Japanese chestnut trees (Castanea crenata Sieb. and Zucc.) showing symptoms indicative of witches' broom disease, including abnormally small leaves and yellowing of young leaves, were examined. Since the symptoms were suggestive of a phytoplasma infection, tissues were assayed for phy...
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Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2002-09, Vol.52 (Pt 5), p.1543-1549 |
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creator | JUNG, Hee-Young SAWAYANAGI, Toshimi KAKIZAWA, Shigeyuki NISHIGAWA, Hisashi MIYATA, Shin-Ichi OSHIMA, Kenro UGAKI, Masashi LEE, Joon-Tak HIBI, Tadaaki NAMBA, Shigetou |
description | In Korea, Japanese chestnut trees (Castanea crenata Sieb. and Zucc.) showing symptoms indicative of witches' broom disease, including abnormally small leaves and yellowing of young leaves, were examined. Since the symptoms were suggestive of a phytoplasma infection, tissues were assayed for phytoplasmas by PCR analysis using a pair of universal primers that amplify a 1.4-kbp phytoplasma 16S rDNA fragment. The phytoplasma-specific fragment was amplified from diseased plants, but not from healthy plants, indicating that a phytoplasma was the causal agent of the chestnut witches' broom (CnWB) disease. The phylogenetic relationship of the CnWB phytoplasma to other phytoplasmas was examined by sequence analysis of the 16S rDNA. A phylogenetic analysis of 16S rDNA sequences of the phytoplasmas placed the CnWB phytoplasma within a distinct subgroup in the phytoplasma clade of the class Mollicutes. The phylogenetic tree indicated that the CnWB phytoplasma is related most closely to coconut phytoplasmas and suggested that they share a common ancestor. The unique properties of the CnWB phytoplasma sequences clearly establish that it represents a novel taxon, 'Candidatus Phytoplasma castaneae'. |
doi_str_mv | 10.1099/00207713-52-5-1543 |
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Since the symptoms were suggestive of a phytoplasma infection, tissues were assayed for phytoplasmas by PCR analysis using a pair of universal primers that amplify a 1.4-kbp phytoplasma 16S rDNA fragment. The phytoplasma-specific fragment was amplified from diseased plants, but not from healthy plants, indicating that a phytoplasma was the causal agent of the chestnut witches' broom (CnWB) disease. The phylogenetic relationship of the CnWB phytoplasma to other phytoplasmas was examined by sequence analysis of the 16S rDNA. A phylogenetic analysis of 16S rDNA sequences of the phytoplasmas placed the CnWB phytoplasma within a distinct subgroup in the phytoplasma clade of the class Mollicutes. The phylogenetic tree indicated that the CnWB phytoplasma is related most closely to coconut phytoplasmas and suggested that they share a common ancestor. The unique properties of the CnWB phytoplasma sequences clearly establish that it represents a novel taxon, 'Candidatus Phytoplasma castaneae'.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/00207713-52-5-1543</identifier><identifier>PMID: 12361256</identifier><language>eng</language><publisher>Reading: Society for General Microbiology</publisher><subject>Acholeplasmataceae - classification ; Acholeplasmataceae - genetics ; Acholeplasmataceae - pathogenicity ; Bacterial plant pathogens ; Bacteriology ; Base Sequence ; Biological and medical sciences ; Cocos - microbiology ; DNA, Bacterial - genetics ; DNA, Ribosomal - genetics ; Fagaceae - microbiology ; Fundamental and applied biological sciences. Psychology ; Korea ; Microbiology ; Molecular Sequence Data ; Phylogeny ; Phytopathology. Animal pests. Plant and forest protection ; Plant Diseases - microbiology ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Systematics ; Systematics. Structure, properties and multiplication. Genetics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2002-09, Vol.52 (Pt 5), p.1543-1549</ispartof><rights>2003 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2513-e54ffe404ff0e84eefebb1b83272a50591eb93a695e6d566c47755d03e7635063</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3737,27915,27916</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=13919422$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12361256$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>JUNG, Hee-Young</creatorcontrib><creatorcontrib>SAWAYANAGI, Toshimi</creatorcontrib><creatorcontrib>KAKIZAWA, Shigeyuki</creatorcontrib><creatorcontrib>NISHIGAWA, Hisashi</creatorcontrib><creatorcontrib>MIYATA, Shin-Ichi</creatorcontrib><creatorcontrib>OSHIMA, Kenro</creatorcontrib><creatorcontrib>UGAKI, Masashi</creatorcontrib><creatorcontrib>LEE, Joon-Tak</creatorcontrib><creatorcontrib>HIBI, Tadaaki</creatorcontrib><creatorcontrib>NAMBA, Shigetou</creatorcontrib><title>'Candidatus phytoplasma castaneae', a novel phytoplasma taxon associated with chestnut witches' broom disease</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>In Korea, Japanese chestnut trees (Castanea crenata Sieb. and Zucc.) showing symptoms indicative of witches' broom disease, including abnormally small leaves and yellowing of young leaves, were examined. Since the symptoms were suggestive of a phytoplasma infection, tissues were assayed for phytoplasmas by PCR analysis using a pair of universal primers that amplify a 1.4-kbp phytoplasma 16S rDNA fragment. The phytoplasma-specific fragment was amplified from diseased plants, but not from healthy plants, indicating that a phytoplasma was the causal agent of the chestnut witches' broom (CnWB) disease. The phylogenetic relationship of the CnWB phytoplasma to other phytoplasmas was examined by sequence analysis of the 16S rDNA. A phylogenetic analysis of 16S rDNA sequences of the phytoplasmas placed the CnWB phytoplasma within a distinct subgroup in the phytoplasma clade of the class Mollicutes. The phylogenetic tree indicated that the CnWB phytoplasma is related most closely to coconut phytoplasmas and suggested that they share a common ancestor. The unique properties of the CnWB phytoplasma sequences clearly establish that it represents a novel taxon, 'Candidatus Phytoplasma castaneae'.</description><subject>Acholeplasmataceae - classification</subject><subject>Acholeplasmataceae - genetics</subject><subject>Acholeplasmataceae - pathogenicity</subject><subject>Bacterial plant pathogens</subject><subject>Bacteriology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Cocos - microbiology</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fagaceae - microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Korea</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Phytopathology. Animal pests. Plant and forest protection</subject><subject>Plant Diseases - microbiology</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Systematics</subject><subject>Systematics. Structure, properties and multiplication. Genetics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1P3EAMhkdVUaG0f4ADmkvZSwOezyRHtOoHEhIXOI-ciaNNlWSWOKHl35MVSxEnLh57_LzWeF4hThScKyjLCwANea5M5nTmMuWs-SCOlPU-c2Dsx_-59ofiM_MfgOUC4JM4VNp4pZ0_Ev1qjUPd1jjNLLebxyltO-QeZUSecCCk1XeJckgP1L3pT_gvDRKZU2xxolr-baeNjBviaZinXbXLV7IaU-pl3TIh0xdx0GDH9HV_Hou7nz9u17-z65tfV-vL6yxqt-xDzjYNWVgiUGGJGqoqVRVG5xoduFJRVRr0pSNfO--jzXPnajCUe-PAm2Nx9jx3O6b7eXlS6FuO1HXLRmnmkGtltQL7LqgKXxpbFAuon8E4JuaRmrAd2x7Hx6Ag7NwIL24Ep4MLOzcW0el--lz1VL9K9t-_AN_2AHLErhlxiC2_cqZUpdXaPAEGg5KA</recordid><startdate>200209</startdate><enddate>200209</enddate><creator>JUNG, Hee-Young</creator><creator>SAWAYANAGI, Toshimi</creator><creator>KAKIZAWA, Shigeyuki</creator><creator>NISHIGAWA, Hisashi</creator><creator>MIYATA, Shin-Ichi</creator><creator>OSHIMA, Kenro</creator><creator>UGAKI, Masashi</creator><creator>LEE, Joon-Tak</creator><creator>HIBI, Tadaaki</creator><creator>NAMBA, Shigetou</creator><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>200209</creationdate><title>'Candidatus phytoplasma castaneae', a novel phytoplasma taxon associated with chestnut witches' broom disease</title><author>JUNG, Hee-Young ; SAWAYANAGI, Toshimi ; KAKIZAWA, Shigeyuki ; NISHIGAWA, Hisashi ; MIYATA, Shin-Ichi ; OSHIMA, Kenro ; UGAKI, Masashi ; LEE, Joon-Tak ; HIBI, Tadaaki ; NAMBA, Shigetou</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2513-e54ffe404ff0e84eefebb1b83272a50591eb93a695e6d566c47755d03e7635063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Acholeplasmataceae - classification</topic><topic>Acholeplasmataceae - genetics</topic><topic>Acholeplasmataceae - pathogenicity</topic><topic>Bacterial plant pathogens</topic><topic>Bacteriology</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Cocos - microbiology</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fagaceae - microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Korea</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Phytopathology. Animal pests. Plant and forest protection</topic><topic>Plant Diseases - microbiology</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Systematics</topic><topic>Systematics. Structure, properties and multiplication. Genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>JUNG, Hee-Young</creatorcontrib><creatorcontrib>SAWAYANAGI, Toshimi</creatorcontrib><creatorcontrib>KAKIZAWA, Shigeyuki</creatorcontrib><creatorcontrib>NISHIGAWA, Hisashi</creatorcontrib><creatorcontrib>MIYATA, Shin-Ichi</creatorcontrib><creatorcontrib>OSHIMA, Kenro</creatorcontrib><creatorcontrib>UGAKI, Masashi</creatorcontrib><creatorcontrib>LEE, Joon-Tak</creatorcontrib><creatorcontrib>HIBI, Tadaaki</creatorcontrib><creatorcontrib>NAMBA, Shigetou</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>JUNG, Hee-Young</au><au>SAWAYANAGI, Toshimi</au><au>KAKIZAWA, Shigeyuki</au><au>NISHIGAWA, Hisashi</au><au>MIYATA, Shin-Ichi</au><au>OSHIMA, Kenro</au><au>UGAKI, Masashi</au><au>LEE, Joon-Tak</au><au>HIBI, Tadaaki</au><au>NAMBA, Shigetou</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>'Candidatus phytoplasma castaneae', a novel phytoplasma taxon associated with chestnut witches' broom disease</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2002-09</date><risdate>2002</risdate><volume>52</volume><issue>Pt 5</issue><spage>1543</spage><epage>1549</epage><pages>1543-1549</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>In Korea, Japanese chestnut trees (Castanea crenata Sieb. and Zucc.) showing symptoms indicative of witches' broom disease, including abnormally small leaves and yellowing of young leaves, were examined. Since the symptoms were suggestive of a phytoplasma infection, tissues were assayed for phytoplasmas by PCR analysis using a pair of universal primers that amplify a 1.4-kbp phytoplasma 16S rDNA fragment. The phytoplasma-specific fragment was amplified from diseased plants, but not from healthy plants, indicating that a phytoplasma was the causal agent of the chestnut witches' broom (CnWB) disease. The phylogenetic relationship of the CnWB phytoplasma to other phytoplasmas was examined by sequence analysis of the 16S rDNA. A phylogenetic analysis of 16S rDNA sequences of the phytoplasmas placed the CnWB phytoplasma within a distinct subgroup in the phytoplasma clade of the class Mollicutes. The phylogenetic tree indicated that the CnWB phytoplasma is related most closely to coconut phytoplasmas and suggested that they share a common ancestor. The unique properties of the CnWB phytoplasma sequences clearly establish that it represents a novel taxon, 'Candidatus Phytoplasma castaneae'.</abstract><cop>Reading</cop><pub>Society for General Microbiology</pub><pmid>12361256</pmid><doi>10.1099/00207713-52-5-1543</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Acholeplasmataceae - classification Acholeplasmataceae - genetics Acholeplasmataceae - pathogenicity Bacterial plant pathogens Bacteriology Base Sequence Biological and medical sciences Cocos - microbiology DNA, Bacterial - genetics DNA, Ribosomal - genetics Fagaceae - microbiology Fundamental and applied biological sciences. Psychology Korea Microbiology Molecular Sequence Data Phylogeny Phytopathology. Animal pests. Plant and forest protection Plant Diseases - microbiology RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Systematics Systematics. Structure, properties and multiplication. Genetics |
title | 'Candidatus phytoplasma castaneae', a novel phytoplasma taxon associated with chestnut witches' broom disease |
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