Correlation of gene and protein structure of rat and human lipocortin I
Lipocortins (annexins) are a family of calcium-dependent phospholipid-binding proteins with phospholipase A2 inhibitory activity. The characteristic primary structure of members of this family consists of a core structure of four or eight repeated domains, which have been implicated in calcium-depen...
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Veröffentlicht in: | Biochemistry (Easton) 1991-09, Vol.30 (37), p.9015-9021 |
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creator | Kovacic, Roger T Tizard, Richard Cate, Richard L Frey, Alexis Z Wallner, Barbara P |
description | Lipocortins (annexins) are a family of calcium-dependent phospholipid-binding proteins with phospholipase A2 inhibitory activity. The characteristic primary structure of members of this family consists of a core structure of four or eight repeated domains, which have been implicated in calcium-dependent phospholipid binding. In two lipocortins (I and II) a short amino-terminal sequence distinct from the core structure has potential regulatory functions which are dependent on its phosphorylation state. We have isolated the rat and the human lipocortin I genes and found that they both consist of 13 exons with a striking conservation of their exon-intron structure and their promoter and amino acid sequences. Both lipocortin I genes are at least 19 kbp in length with exons ranging from 57 to 123 bp interrupted by introns as large as 5 kbp. Each of the four repeat units of lipocortin I are encoded by two consecutive exons while individual exons code for the highly conserved putative calcium-binding domains. The promoter sequences in the rat and in human genes are highly conserved and contain nucleotide sequences characterized as enhancer sequences in other genes. The structure of the lipocortin I gene lends support to the hypothesis that the lipocortin genes arose by a duplication of a single domain. |
doi_str_mv | 10.1021/bi00101a015 |
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The characteristic primary structure of members of this family consists of a core structure of four or eight repeated domains, which have been implicated in calcium-dependent phospholipid binding. In two lipocortins (I and II) a short amino-terminal sequence distinct from the core structure has potential regulatory functions which are dependent on its phosphorylation state. We have isolated the rat and the human lipocortin I genes and found that they both consist of 13 exons with a striking conservation of their exon-intron structure and their promoter and amino acid sequences. Both lipocortin I genes are at least 19 kbp in length with exons ranging from 57 to 123 bp interrupted by introns as large as 5 kbp. Each of the four repeat units of lipocortin I are encoded by two consecutive exons while individual exons code for the highly conserved putative calcium-binding domains. The promoter sequences in the rat and in human genes are highly conserved and contain nucleotide sequences characterized as enhancer sequences in other genes. The structure of the lipocortin I gene lends support to the hypothesis that the lipocortin genes arose by a duplication of a single domain.</description><identifier>ISSN: 0006-2960</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/bi00101a015</identifier><identifier>PMID: 1832554</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Amino Acid Sequence ; Animals ; Annexins ; Base Sequence ; Biological and medical sciences ; Calcium-Binding Proteins - chemistry ; Calcium-Binding Proteins - genetics ; Cloning, Molecular ; Exons ; Fundamental and applied biological sciences. Psychology ; Genes ; Genes. 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The characteristic primary structure of members of this family consists of a core structure of four or eight repeated domains, which have been implicated in calcium-dependent phospholipid binding. In two lipocortins (I and II) a short amino-terminal sequence distinct from the core structure has potential regulatory functions which are dependent on its phosphorylation state. We have isolated the rat and the human lipocortin I genes and found that they both consist of 13 exons with a striking conservation of their exon-intron structure and their promoter and amino acid sequences. Both lipocortin I genes are at least 19 kbp in length with exons ranging from 57 to 123 bp interrupted by introns as large as 5 kbp. Each of the four repeat units of lipocortin I are encoded by two consecutive exons while individual exons code for the highly conserved putative calcium-binding domains. The promoter sequences in the rat and in human genes are highly conserved and contain nucleotide sequences characterized as enhancer sequences in other genes. The structure of the lipocortin I gene lends support to the hypothesis that the lipocortin genes arose by a duplication of a single domain.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Annexins</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Calcium-Binding Proteins - chemistry</subject><subject>Calcium-Binding Proteins - genetics</subject><subject>Cloning, Molecular</subject><subject>Exons</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes</subject><subject>Genes. Genome</subject><subject>Humans</subject><subject>Introns</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Promoter Regions, Genetic</subject><subject>Rats</subject><subject>Structure-Activity Relationship</subject><issn>0006-2960</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1991</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0E1rFTEUBuAgSnutXbkWZiG6kNFzMsnMZFkuthaKH_QD6SacySR16tzJbZIB_femzqW6EFyFw_twcngZe47wFoHju24AQEAClI_YCiWHUiglH7MVANQlVzXss6cx3uZRQCP22B62FZdSrNjJ2odgR0qDnwrvihs72YKmvtgGn-wwFTGF2aQ52Ps0UPodfps3NBXjsPXGh5TV6TP2xNEY7eHuPWCXx-8v1h_Ks08np-ujs5IEilTm76lTUvRkTeda1ZuKY8-rllunnARhawRJhkvs6tY2jkuHbeeEo7aTVV0dsFfL3nzf3Wxj0pshGjuONFk_R91wULVsq_9CrFFCpSDDNws0wccYrNPbMGwo_NQI-r5f_Ve_Wb_YrZ27je3_2KXQnL_c5RQNjS7QZIb4wCRgk1dmVi5siMn-eIgpfNd1UzVSX3w-19cfvxxffb1WWmX_evFkor71c5hyyf888Be2FJzP</recordid><startdate>19910917</startdate><enddate>19910917</enddate><creator>Kovacic, Roger T</creator><creator>Tizard, Richard</creator><creator>Cate, Richard L</creator><creator>Frey, Alexis Z</creator><creator>Wallner, Barbara P</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19910917</creationdate><title>Correlation of gene and protein structure of rat and human lipocortin I</title><author>Kovacic, Roger T ; Tizard, Richard ; Cate, Richard L ; Frey, Alexis Z ; Wallner, Barbara P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a414t-407ab954daecbf89dc321d2382ef9f504e6105ac251b68e7f25f18bf4fa8b5363</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1991</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Annexins</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Calcium-Binding Proteins - chemistry</topic><topic>Calcium-Binding Proteins - genetics</topic><topic>Cloning, Molecular</topic><topic>Exons</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes</topic><topic>Genes. Genome</topic><topic>Humans</topic><topic>Introns</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>Promoter Regions, Genetic</topic><topic>Rats</topic><topic>Structure-Activity Relationship</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kovacic, Roger T</creatorcontrib><creatorcontrib>Tizard, Richard</creatorcontrib><creatorcontrib>Cate, Richard L</creatorcontrib><creatorcontrib>Frey, Alexis Z</creatorcontrib><creatorcontrib>Wallner, Barbara P</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kovacic, Roger T</au><au>Tizard, Richard</au><au>Cate, Richard L</au><au>Frey, Alexis Z</au><au>Wallner, Barbara P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Correlation of gene and protein structure of rat and human lipocortin I</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>1991-09-17</date><risdate>1991</risdate><volume>30</volume><issue>37</issue><spage>9015</spage><epage>9021</epage><pages>9015-9021</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>Lipocortins (annexins) are a family of calcium-dependent phospholipid-binding proteins with phospholipase A2 inhibitory activity. The characteristic primary structure of members of this family consists of a core structure of four or eight repeated domains, which have been implicated in calcium-dependent phospholipid binding. In two lipocortins (I and II) a short amino-terminal sequence distinct from the core structure has potential regulatory functions which are dependent on its phosphorylation state. We have isolated the rat and the human lipocortin I genes and found that they both consist of 13 exons with a striking conservation of their exon-intron structure and their promoter and amino acid sequences. Both lipocortin I genes are at least 19 kbp in length with exons ranging from 57 to 123 bp interrupted by introns as large as 5 kbp. Each of the four repeat units of lipocortin I are encoded by two consecutive exons while individual exons code for the highly conserved putative calcium-binding domains. The promoter sequences in the rat and in human genes are highly conserved and contain nucleotide sequences characterized as enhancer sequences in other genes. The structure of the lipocortin I gene lends support to the hypothesis that the lipocortin genes arose by a duplication of a single domain.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>1832554</pmid><doi>10.1021/bi00101a015</doi><tpages>7</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Annexins Base Sequence Biological and medical sciences Calcium-Binding Proteins - chemistry Calcium-Binding Proteins - genetics Cloning, Molecular Exons Fundamental and applied biological sciences. Psychology Genes Genes. Genome Humans Introns Molecular and cellular biology Molecular genetics Molecular Sequence Data Promoter Regions, Genetic Rats Structure-Activity Relationship |
title | Correlation of gene and protein structure of rat and human lipocortin I |
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