A sequence-profile-based HMM for predicting and discriminating β barrel membrane proteins

Motivation: Membrane proteins are an abundant and functionally relevant subset of proteins that putatively include from about 15 up to 30% of the proteome of organisms fully sequenced. These estimates are mainly computed on the basis of sequence comparison and membrane protein prediction. It is ther...

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Veröffentlicht in:	Bioinformatics 2002-07, Vol.18 (suppl-1), p.S46-S53
Hauptverfasser:	Martelli, Pier Luigi, Fariselli, Piero, Krogh, Anders, Casadio, Rita
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Markov Chains Membrane Proteins - chemistry Membrane Proteins - classification Models, Chemical Models, Molecular Models, Statistical Sequence Alignment - methods Sequence Analysis, Protein - methods Sequence Homology, Amino Acid
Online-Zugang:	Volltext
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