Confocal stereology and image analysis: methods for estimating geometrical characteristics of cells and tissues from three-dimensional confocal images
A short review of confocal stereology and three-dimensional image analysis is presented, pointing out the achievements accomplished in this field by the Department of Biomathematics (Institute of Physiology, Prague). One of the methods of confocal stereology, the fakir method for surface area estima...
Gespeichert in:
| Veröffentlicht in: | Physiological research 2004, Vol.53 Suppl 1, p.S47-S55 |
|---|---|
| Hauptverfasser: | , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | S55 |
|---|---|
| container_issue | |
| container_start_page | S47 |
| container_title | Physiological research |
| container_volume | 53 Suppl 1 |
| creator | Kubínová, L Janácek, J Karen, P Radochová, B Difato, F Krekule, I |
| description | A short review of confocal stereology and three-dimensional image analysis is presented, pointing out the achievements accomplished in this field by the Department of Biomathematics (Institute of Physiology, Prague). One of the methods of confocal stereology, the fakir method for surface area estimation, developed by this laboratory, is described. Methods for automatic measurement of geometrical characteristics of microscopical structures, based on 3-D image processing or surface triangulation, are discussed and compared with interactive stereological methods. Three-dimensional reconstruction programs and software implementation of stereological and digital methods as well as their practical applications are presented. The future trends are discussed. |
| doi_str_mv | 10.33549/physiolres.930000.53.S47 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_71904993</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>71904993</sourcerecordid><originalsourceid>FETCH-LOGICAL-c2797-3f1b05e27cde258f43af27c721108a8d94a66353c4d7feb94508b18219eff6243</originalsourceid><addsrcrecordid>eNpFUctuGyEURVGixE37CxXdZDcuTwPZVVaSVorURdo1wszFnmpmcLjjhX8k3xv8qMIG0LnnAYeQb5zNpdTKfd9u9tjlvgDOnWR1zbWcvyhzQWbcMtE4Z-QlmTG7EI1VzN6QT4j_GBOGGXlNbrjm3DmpZ-RtmceUY-gpTlAg93m9p2FsaTeENdRT6KsV3tMBpk1ukaZcKOBU4akb13QNuSKlOyjETSghVpmu4hFpTjRC3-NRb-oQd1D5JQ902hSApu0GGOs7xgP3f4yjL34mVyn0CF_O-y35-_jwZ_mzef799Gv547mJwjjTyMRXTIMwsQWhbVIypHoxgnNmg22dCouF1DKq1iRYOaWZXXEruIOUFkLJW3J30t2W_FrjTX7o8BA6jJB36A13TNWfqoPuNBhLRiyQ_LbUqGXvOfPHUvxHKf5UitfS11Iq9-vZZLcaoP1gnluQ71a5kGU</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>71904993</pqid></control><display><type>article</type><title>Confocal stereology and image analysis: methods for estimating geometrical characteristics of cells and tissues from three-dimensional confocal images</title><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Kubínová, L ; Janácek, J ; Karen, P ; Radochová, B ; Difato, F ; Krekule, I</creator><creatorcontrib>Kubínová, L ; Janácek, J ; Karen, P ; Radochová, B ; Difato, F ; Krekule, I</creatorcontrib><description>A short review of confocal stereology and three-dimensional image analysis is presented, pointing out the achievements accomplished in this field by the Department of Biomathematics (Institute of Physiology, Prague). One of the methods of confocal stereology, the fakir method for surface area estimation, developed by this laboratory, is described. Methods for automatic measurement of geometrical characteristics of microscopical structures, based on 3-D image processing or surface triangulation, are discussed and compared with interactive stereological methods. Three-dimensional reconstruction programs and software implementation of stereological and digital methods as well as their practical applications are presented. The future trends are discussed.</description><identifier>ISSN: 0862-8408</identifier><identifier>EISSN: 1802-9973</identifier><identifier>DOI: 10.33549/physiolres.930000.53.S47</identifier><identifier>PMID: 15119935</identifier><language>eng</language><publisher>Czech Republic</publisher><subject>Animals ; Chorionic Villi - diagnostic imaging ; Humans ; Image Processing, Computer-Assisted ; Imaging, Three-Dimensional - methods ; Mathematics ; Microscopy, Confocal - methods ; Nicotiana - ultrastructure ; Surface Properties ; Ultrasonography</subject><ispartof>Physiological research, 2004, Vol.53 Suppl 1, p.S47-S55</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2797-3f1b05e27cde258f43af27c721108a8d94a66353c4d7feb94508b18219eff6243</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,864,4022,27922,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15119935$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kubínová, L</creatorcontrib><creatorcontrib>Janácek, J</creatorcontrib><creatorcontrib>Karen, P</creatorcontrib><creatorcontrib>Radochová, B</creatorcontrib><creatorcontrib>Difato, F</creatorcontrib><creatorcontrib>Krekule, I</creatorcontrib><title>Confocal stereology and image analysis: methods for estimating geometrical characteristics of cells and tissues from three-dimensional confocal images</title><title>Physiological research</title><addtitle>Physiol Res</addtitle><description>A short review of confocal stereology and three-dimensional image analysis is presented, pointing out the achievements accomplished in this field by the Department of Biomathematics (Institute of Physiology, Prague). One of the methods of confocal stereology, the fakir method for surface area estimation, developed by this laboratory, is described. Methods for automatic measurement of geometrical characteristics of microscopical structures, based on 3-D image processing or surface triangulation, are discussed and compared with interactive stereological methods. Three-dimensional reconstruction programs and software implementation of stereological and digital methods as well as their practical applications are presented. The future trends are discussed.</description><subject>Animals</subject><subject>Chorionic Villi - diagnostic imaging</subject><subject>Humans</subject><subject>Image Processing, Computer-Assisted</subject><subject>Imaging, Three-Dimensional - methods</subject><subject>Mathematics</subject><subject>Microscopy, Confocal - methods</subject><subject>Nicotiana - ultrastructure</subject><subject>Surface Properties</subject><subject>Ultrasonography</subject><issn>0862-8408</issn><issn>1802-9973</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpFUctuGyEURVGixE37CxXdZDcuTwPZVVaSVorURdo1wszFnmpmcLjjhX8k3xv8qMIG0LnnAYeQb5zNpdTKfd9u9tjlvgDOnWR1zbWcvyhzQWbcMtE4Z-QlmTG7EI1VzN6QT4j_GBOGGXlNbrjm3DmpZ-RtmceUY-gpTlAg93m9p2FsaTeENdRT6KsV3tMBpk1ukaZcKOBU4akb13QNuSKlOyjETSghVpmu4hFpTjRC3-NRb-oQd1D5JQ902hSApu0GGOs7xgP3f4yjL34mVyn0CF_O-y35-_jwZ_mzef799Gv547mJwjjTyMRXTIMwsQWhbVIypHoxgnNmg22dCouF1DKq1iRYOaWZXXEruIOUFkLJW3J30t2W_FrjTX7o8BA6jJB36A13TNWfqoPuNBhLRiyQ_LbUqGXvOfPHUvxHKf5UitfS11Iq9-vZZLcaoP1gnluQ71a5kGU</recordid><startdate>2004</startdate><enddate>2004</enddate><creator>Kubínová, L</creator><creator>Janácek, J</creator><creator>Karen, P</creator><creator>Radochová, B</creator><creator>Difato, F</creator><creator>Krekule, I</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>2004</creationdate><title>Confocal stereology and image analysis: methods for estimating geometrical characteristics of cells and tissues from three-dimensional confocal images</title><author>Kubínová, L ; Janácek, J ; Karen, P ; Radochová, B ; Difato, F ; Krekule, I</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2797-3f1b05e27cde258f43af27c721108a8d94a66353c4d7feb94508b18219eff6243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Animals</topic><topic>Chorionic Villi - diagnostic imaging</topic><topic>Humans</topic><topic>Image Processing, Computer-Assisted</topic><topic>Imaging, Three-Dimensional - methods</topic><topic>Mathematics</topic><topic>Microscopy, Confocal - methods</topic><topic>Nicotiana - ultrastructure</topic><topic>Surface Properties</topic><topic>Ultrasonography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kubínová, L</creatorcontrib><creatorcontrib>Janácek, J</creatorcontrib><creatorcontrib>Karen, P</creatorcontrib><creatorcontrib>Radochová, B</creatorcontrib><creatorcontrib>Difato, F</creatorcontrib><creatorcontrib>Krekule, I</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Physiological research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kubínová, L</au><au>Janácek, J</au><au>Karen, P</au><au>Radochová, B</au><au>Difato, F</au><au>Krekule, I</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Confocal stereology and image analysis: methods for estimating geometrical characteristics of cells and tissues from three-dimensional confocal images</atitle><jtitle>Physiological research</jtitle><addtitle>Physiol Res</addtitle><date>2004</date><risdate>2004</risdate><volume>53 Suppl 1</volume><spage>S47</spage><epage>S55</epage><pages>S47-S55</pages><issn>0862-8408</issn><eissn>1802-9973</eissn><abstract>A short review of confocal stereology and three-dimensional image analysis is presented, pointing out the achievements accomplished in this field by the Department of Biomathematics (Institute of Physiology, Prague). One of the methods of confocal stereology, the fakir method for surface area estimation, developed by this laboratory, is described. Methods for automatic measurement of geometrical characteristics of microscopical structures, based on 3-D image processing or surface triangulation, are discussed and compared with interactive stereological methods. Three-dimensional reconstruction programs and software implementation of stereological and digital methods as well as their practical applications are presented. The future trends are discussed.</abstract><cop>Czech Republic</cop><pmid>15119935</pmid><doi>10.33549/physiolres.930000.53.S47</doi><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0862-8408 |
| ispartof | Physiological research, 2004, Vol.53 Suppl 1, p.S47-S55 |
| issn | 0862-8408 1802-9973 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_71904993 |
| source | MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals |
| subjects | Animals Chorionic Villi - diagnostic imaging Humans Image Processing, Computer-Assisted Imaging, Three-Dimensional - methods Mathematics Microscopy, Confocal - methods Nicotiana - ultrastructure Surface Properties Ultrasonography |
| title | Confocal stereology and image analysis: methods for estimating geometrical characteristics of cells and tissues from three-dimensional confocal images |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-11T13%3A44%3A14IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Confocal%20stereology%20and%20image%20analysis:%20methods%20for%20estimating%20geometrical%20characteristics%20of%20cells%20and%20tissues%20from%20three-dimensional%20confocal%20images&rft.jtitle=Physiological%20research&rft.au=Kub%C3%ADnov%C3%A1,%20L&rft.date=2004&rft.volume=53%20Suppl%201&rft.spage=S47&rft.epage=S55&rft.pages=S47-S55&rft.issn=0862-8408&rft.eissn=1802-9973&rft_id=info:doi/10.33549/physiolres.930000.53.S47&rft_dat=%3Cproquest_cross%3E71904993%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=71904993&rft_id=info:pmid/15119935&rfr_iscdi=true |