Prevalence, risk factors and molecular epidemiology of Brachyspira pilosicoli in humans on the island of Bali, Indonesia
School of Veterinary and Biomedical Sciences, Murdoch University, Murdoch, Western Australia 6150, Australia Correspondence David J. Hampson d.hampson{at}murdoch.edu.au Received August 7, 2003 Accepted December 22, 2003 The purpose of this study was to investigate the prevalence and epidemiology of...
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creator | Margawani, K. Rini Robertson, Ian D Brooke, C. Josephine Hampson, David J |
description | School of Veterinary and Biomedical Sciences, Murdoch University, Murdoch, Western Australia 6150, Australia
Correspondence David J. Hampson d.hampson{at}murdoch.edu.au
Received August 7, 2003
Accepted December 22, 2003
The purpose of this study was to investigate the prevalence and epidemiology of the anaerobic intestinal spirochaete Brachyspira pilosicoli amongst Indonesians living in rural and urban settings on the island of Bali. Faecal samples ( n = 992) were collected on two occasions, 4 months apart, from people living in four traditional farming villages, one peri-urban location and one urban area. Samples were cultured anaerobically on selective agar and intestinal spirochaete isolates were confirmed to be B. pilosicoli by using a species-specific PCR. Forty-eight of the 121 isolates obtained were typed by using PFGE. A questionnaire was administered to participants and analysed in order to identify potential risk factors for colonization. Overall prevalence of carriage on the two visits was 11.8 and 12.6 %, respectively. Prevalence at different locations varied from 3.3 to 23.4 %, with the highest prevalence occurring in the peri-urban location. Considerable strain diversity was found, with the 48 isolates being divided into 44 PFGE types. There was no significant association between colonization and ownership of animals, contact with animals, farming, age or gender. On the first visit, colonization was significantly more common in people who used well water compared to those who used tap water. On the second visit, colonization was significantly more common in people with wet faeces than in those with normal faeces.
This paper was presented at the Second International Conference on Colonic Spirochaetal Infections in Animals and Humans, Edinburgh, UK, 24 April 2003.
Abbreviations: CI, confidence interval; PNG, Papua New Guinea. |
doi_str_mv | 10.1099/jmm.0.05415-0 |
format | Article |
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Correspondence David J. Hampson d.hampson{at}murdoch.edu.au
Received August 7, 2003
Accepted December 22, 2003
The purpose of this study was to investigate the prevalence and epidemiology of the anaerobic intestinal spirochaete Brachyspira pilosicoli amongst Indonesians living in rural and urban settings on the island of Bali. Faecal samples ( n = 992) were collected on two occasions, 4 months apart, from people living in four traditional farming villages, one peri-urban location and one urban area. Samples were cultured anaerobically on selective agar and intestinal spirochaete isolates were confirmed to be B. pilosicoli by using a species-specific PCR. Forty-eight of the 121 isolates obtained were typed by using PFGE. A questionnaire was administered to participants and analysed in order to identify potential risk factors for colonization. Overall prevalence of carriage on the two visits was 11.8 and 12.6 %, respectively. Prevalence at different locations varied from 3.3 to 23.4 %, with the highest prevalence occurring in the peri-urban location. Considerable strain diversity was found, with the 48 isolates being divided into 44 PFGE types. There was no significant association between colonization and ownership of animals, contact with animals, farming, age or gender. On the first visit, colonization was significantly more common in people who used well water compared to those who used tap water. On the second visit, colonization was significantly more common in people with wet faeces than in those with normal faeces.
This paper was presented at the Second International Conference on Colonic Spirochaetal Infections in Animals and Humans, Edinburgh, UK, 24 April 2003.
Abbreviations: CI, confidence interval; PNG, Papua New Guinea.</description><identifier>ISSN: 0022-2615</identifier><identifier>EISSN: 1473-5644</identifier><identifier>DOI: 10.1099/jmm.0.05415-0</identifier><identifier>PMID: 15017290</identifier><identifier>CODEN: JMMIAV</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Adolescent ; Adult ; Aged ; Animals ; Biological and medical sciences ; Brachyspira - classification ; Brachyspira - genetics ; Brachyspira - isolation & purification ; Brachyspira pilosicoli ; Carrier State - epidemiology ; Carrier State - microbiology ; Child ; Child, Preschool ; DNA, Bacterial - analysis ; Electrophoresis, Gel, Pulsed-Field ; Feces - microbiology ; Female ; Fundamental and applied biological sciences. Psychology ; Humans ; Indonesia - epidemiology ; Infectious diseases ; Male ; Medical sciences ; Microbiology ; Middle Aged ; Molecular Epidemiology ; Polymerase Chain Reaction ; Prevalence ; Risk Factors ; Rural Population ; Spirochaetales Infections - epidemiology ; Spirochaetales Infections - microbiology ; Surveys and Questionnaires ; Urban Population ; Water Supply</subject><ispartof>Journal of medical microbiology, 2004-04, Vol.53 (4), p.325-332</ispartof><rights>2004 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c450t-126ce2d3ac164856721a71dbe9df0a7bf6b6e275de896fc7c3d357f0b907a6843</citedby><cites>FETCH-LOGICAL-c450t-126ce2d3ac164856721a71dbe9df0a7bf6b6e275de896fc7c3d357f0b907a6843</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>309,310,314,776,780,785,786,3733,3734,23909,23910,25118,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15637333$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15017290$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Margawani, K. Rini</creatorcontrib><creatorcontrib>Robertson, Ian D</creatorcontrib><creatorcontrib>Brooke, C. Josephine</creatorcontrib><creatorcontrib>Hampson, David J</creatorcontrib><title>Prevalence, risk factors and molecular epidemiology of Brachyspira pilosicoli in humans on the island of Bali, Indonesia</title><title>Journal of medical microbiology</title><addtitle>J Med Microbiol</addtitle><description>School of Veterinary and Biomedical Sciences, Murdoch University, Murdoch, Western Australia 6150, Australia
Correspondence David J. Hampson d.hampson{at}murdoch.edu.au
Received August 7, 2003
Accepted December 22, 2003
The purpose of this study was to investigate the prevalence and epidemiology of the anaerobic intestinal spirochaete Brachyspira pilosicoli amongst Indonesians living in rural and urban settings on the island of Bali. Faecal samples ( n = 992) were collected on two occasions, 4 months apart, from people living in four traditional farming villages, one peri-urban location and one urban area. Samples were cultured anaerobically on selective agar and intestinal spirochaete isolates were confirmed to be B. pilosicoli by using a species-specific PCR. Forty-eight of the 121 isolates obtained were typed by using PFGE. A questionnaire was administered to participants and analysed in order to identify potential risk factors for colonization. Overall prevalence of carriage on the two visits was 11.8 and 12.6 %, respectively. Prevalence at different locations varied from 3.3 to 23.4 %, with the highest prevalence occurring in the peri-urban location. Considerable strain diversity was found, with the 48 isolates being divided into 44 PFGE types. There was no significant association between colonization and ownership of animals, contact with animals, farming, age or gender. On the first visit, colonization was significantly more common in people who used well water compared to those who used tap water. On the second visit, colonization was significantly more common in people with wet faeces than in those with normal faeces.
This paper was presented at the Second International Conference on Colonic Spirochaetal Infections in Animals and Humans, Edinburgh, UK, 24 April 2003.
Abbreviations: CI, confidence interval; PNG, Papua New Guinea.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>Brachyspira - classification</subject><subject>Brachyspira - genetics</subject><subject>Brachyspira - isolation & purification</subject><subject>Brachyspira pilosicoli</subject><subject>Carrier State - epidemiology</subject><subject>Carrier State - microbiology</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>DNA, Bacterial - analysis</subject><subject>Electrophoresis, Gel, Pulsed-Field</subject><subject>Feces - microbiology</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Humans</subject><subject>Indonesia - epidemiology</subject><subject>Infectious diseases</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Microbiology</subject><subject>Middle Aged</subject><subject>Molecular Epidemiology</subject><subject>Polymerase Chain Reaction</subject><subject>Prevalence</subject><subject>Risk Factors</subject><subject>Rural Population</subject><subject>Spirochaetales Infections - epidemiology</subject><subject>Spirochaetales Infections - microbiology</subject><subject>Surveys and Questionnaires</subject><subject>Urban Population</subject><subject>Water Supply</subject><issn>0022-2615</issn><issn>1473-5644</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkTuP1DAURi0EYoeFkha5AZrNYMevcbmseKy0EhRQW45zPfFix8GeAPPvSZiRoKO6Lo6_--kehJ5TsqVE6zf3KW3JlghORUMeoA3lijVCcv4QbQhp26aVVFygJ7XeE0IVY_oxuqBiebaabNCvzwV-2AijgytcQv2GvXWHXCq2Y49TjuDmaAuGKfSQQo55f8TZ47fFuuFYp1AsnkLMNbgcAw4jHuZkx4rziA8D4FDjGrT-sDFc4duxzyPUYJ-iR97GCs_O8xJ9ff_uy83H5u7Th9ub67vGcUEODW2lg7Zn1lHJd0KqllpF-w5074lVnZedhFaJHnZaeqcc65lQnnSaKCt3nF2iV6fcqeTvM9SDSaE6iEstyHM1ajmE0Jr9F6RKi53iegGbE-hKrrWAN1MJyZajocSsTszixBDzx4khC__iHDx3Cfq_9FnCArw8A7Y6G32xowv1H06yxdva8PWJG8J--BkKmD2MKSw1upDXpYIZblgr2G-VIaOz</recordid><startdate>20040401</startdate><enddate>20040401</enddate><creator>Margawani, K. 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Josephine ; Hampson, David J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c450t-126ce2d3ac164856721a71dbe9df0a7bf6b6e275de896fc7c3d357f0b907a6843</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>Brachyspira - classification</topic><topic>Brachyspira - genetics</topic><topic>Brachyspira - isolation & purification</topic><topic>Brachyspira pilosicoli</topic><topic>Carrier State - epidemiology</topic><topic>Carrier State - microbiology</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>DNA, Bacterial - analysis</topic><topic>Electrophoresis, Gel, Pulsed-Field</topic><topic>Feces - microbiology</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Humans</topic><topic>Indonesia - epidemiology</topic><topic>Infectious diseases</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Microbiology</topic><topic>Middle Aged</topic><topic>Molecular Epidemiology</topic><topic>Polymerase Chain Reaction</topic><topic>Prevalence</topic><topic>Risk Factors</topic><topic>Rural Population</topic><topic>Spirochaetales Infections - epidemiology</topic><topic>Spirochaetales Infections - microbiology</topic><topic>Surveys and Questionnaires</topic><topic>Urban Population</topic><topic>Water Supply</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Margawani, K. Rini</creatorcontrib><creatorcontrib>Robertson, Ian D</creatorcontrib><creatorcontrib>Brooke, C. 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Josephine</au><au>Hampson, David J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Prevalence, risk factors and molecular epidemiology of Brachyspira pilosicoli in humans on the island of Bali, Indonesia</atitle><jtitle>Journal of medical microbiology</jtitle><addtitle>J Med Microbiol</addtitle><date>2004-04-01</date><risdate>2004</risdate><volume>53</volume><issue>4</issue><spage>325</spage><epage>332</epage><pages>325-332</pages><issn>0022-2615</issn><eissn>1473-5644</eissn><coden>JMMIAV</coden><abstract>School of Veterinary and Biomedical Sciences, Murdoch University, Murdoch, Western Australia 6150, Australia
Correspondence David J. Hampson d.hampson{at}murdoch.edu.au
Received August 7, 2003
Accepted December 22, 2003
The purpose of this study was to investigate the prevalence and epidemiology of the anaerobic intestinal spirochaete Brachyspira pilosicoli amongst Indonesians living in rural and urban settings on the island of Bali. Faecal samples ( n = 992) were collected on two occasions, 4 months apart, from people living in four traditional farming villages, one peri-urban location and one urban area. Samples were cultured anaerobically on selective agar and intestinal spirochaete isolates were confirmed to be B. pilosicoli by using a species-specific PCR. Forty-eight of the 121 isolates obtained were typed by using PFGE. A questionnaire was administered to participants and analysed in order to identify potential risk factors for colonization. Overall prevalence of carriage on the two visits was 11.8 and 12.6 %, respectively. Prevalence at different locations varied from 3.3 to 23.4 %, with the highest prevalence occurring in the peri-urban location. Considerable strain diversity was found, with the 48 isolates being divided into 44 PFGE types. There was no significant association between colonization and ownership of animals, contact with animals, farming, age or gender. On the first visit, colonization was significantly more common in people who used well water compared to those who used tap water. On the second visit, colonization was significantly more common in people with wet faeces than in those with normal faeces.
This paper was presented at the Second International Conference on Colonic Spirochaetal Infections in Animals and Humans, Edinburgh, UK, 24 April 2003.
Abbreviations: CI, confidence interval; PNG, Papua New Guinea.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>15017290</pmid><doi>10.1099/jmm.0.05415-0</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adult Aged Animals Biological and medical sciences Brachyspira - classification Brachyspira - genetics Brachyspira - isolation & purification Brachyspira pilosicoli Carrier State - epidemiology Carrier State - microbiology Child Child, Preschool DNA, Bacterial - analysis Electrophoresis, Gel, Pulsed-Field Feces - microbiology Female Fundamental and applied biological sciences. Psychology Humans Indonesia - epidemiology Infectious diseases Male Medical sciences Microbiology Middle Aged Molecular Epidemiology Polymerase Chain Reaction Prevalence Risk Factors Rural Population Spirochaetales Infections - epidemiology Spirochaetales Infections - microbiology Surveys and Questionnaires Urban Population Water Supply |
title | Prevalence, risk factors and molecular epidemiology of Brachyspira pilosicoli in humans on the island of Bali, Indonesia |
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