Assessing Model Structure Uncertainty Through An Analysis Of System Feedback And Bayesian Networks
Ecological predictions and management strategies are sensitive to variability in model parameters as well as uncertainty in model structure. Systematic analysis of the effect of alternative model structures, however, is often beyond the resources typically available to ecologists, ecological risk pr...
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Veröffentlicht in: | Ecological applications 2008-06, Vol.18 (4), p.1070-1082 |
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description | Ecological predictions and management strategies are sensitive to variability in model parameters as well as uncertainty in model structure. Systematic analysis of the effect of alternative model structures, however, is often beyond the resources typically available to ecologists, ecological risk practitioners, and natural resource managers. Many of these practitioners are also using Bayesian belief networks based on expert opinion to fill gaps in empirical information. The practical application of this approach can be limited by the need to populate large conditional probability tables and the complexity associated with ecological feedback cycles. In this paper, we describe a modeling approach that helps solve these problems by embedding a qualitative analysis of sign directed graphs into the probabilistic framework of a Bayesian belief network. Our approach incorporates the effects of feedback on the model's response to a sustained change in one or more of its parameters, provides an efficient means to explore the effect of alternative model structures, mitigates the cognitive bias in expert opinion, and is amenable to stakeholder input. We demonstrate our approach by examining two published case studies: a host-parasitoid community centered on a nonnative, agricultural pest of citrus cultivars and the response of an experimental lake mesocosm to nutrient input. Observations drawn from these case studies are used to diagnose alternative model structures and to predict the system's response following management intervention. |
doi_str_mv | 10.1890/07-0482.1 |
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Our approach incorporates the effects of feedback on the model's response to a sustained change in one or more of its parameters, provides an efficient means to explore the effect of alternative model structures, mitigates the cognitive bias in expert opinion, and is amenable to stakeholder input. We demonstrate our approach by examining two published case studies: a host-parasitoid community centered on a nonnative, agricultural pest of citrus cultivars and the response of an experimental lake mesocosm to nutrient input. Observations drawn from these case studies are used to diagnose alternative model structures and to predict the system's response following management intervention.</description><identifier>ISSN: 1051-0761</identifier><identifier>EISSN: 1939-5582</identifier><identifier>DOI: 10.1890/07-0482.1</identifier><identifier>PMID: 18536264</identifier><language>eng</language><publisher>United States: Ecological Society of America</publisher><subject>Animals ; attitudes and opinions ; Bayes Theorem ; Bayesian belief network ; Bayesian networks ; Bayesian theory ; case studies ; Citrus ; Conditional probabilities ; Ecological modeling ; Ecological risk assessment ; ecologists ; ecology ; Ecology - methods ; Ecosystem ; Ecosystem models ; Ecosystems ; expert opinion ; experts ; feedback ; Hemiptera ; Herbivores ; managers ; mathematical models ; model uncertainty ; Modeling ; Models, Biological ; natural resource management ; Parasite hosts ; Parasitism ; prediction ; risk assessment ; signed directed graphs ; system feedback ; systems analysis ; Uncertainty ; Wasps</subject><ispartof>Ecological applications, 2008-06, Vol.18 (4), p.1070-1082</ispartof><rights>Copyright 2008 Ecological Society of America</rights><rights>2008 by the Ecological Society of America</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4720-cbe31e34d72f6f20f5bf8defbdf641fdc8e36d9f533cee61970a86223ebd896b3</citedby><cites>FETCH-LOGICAL-c4720-cbe31e34d72f6f20f5bf8defbdf641fdc8e36d9f533cee61970a86223ebd896b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/40062211$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/40062211$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,1411,27901,27902,45550,45551,57992,58225</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18536264$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hosack, Geoffrey R</creatorcontrib><creatorcontrib>Hayes, Keith R</creatorcontrib><creatorcontrib>Dambacher, Jeffrey M</creatorcontrib><title>Assessing Model Structure Uncertainty Through An Analysis Of System Feedback And Bayesian Networks</title><title>Ecological applications</title><addtitle>Ecol Appl</addtitle><description>Ecological predictions and management strategies are sensitive to variability in model parameters as well as uncertainty in model structure. Systematic analysis of the effect of alternative model structures, however, is often beyond the resources typically available to ecologists, ecological risk practitioners, and natural resource managers. Many of these practitioners are also using Bayesian belief networks based on expert opinion to fill gaps in empirical information. The practical application of this approach can be limited by the need to populate large conditional probability tables and the complexity associated with ecological feedback cycles. In this paper, we describe a modeling approach that helps solve these problems by embedding a qualitative analysis of sign directed graphs into the probabilistic framework of a Bayesian belief network. Our approach incorporates the effects of feedback on the model's response to a sustained change in one or more of its parameters, provides an efficient means to explore the effect of alternative model structures, mitigates the cognitive bias in expert opinion, and is amenable to stakeholder input. We demonstrate our approach by examining two published case studies: a host-parasitoid community centered on a nonnative, agricultural pest of citrus cultivars and the response of an experimental lake mesocosm to nutrient input. Observations drawn from these case studies are used to diagnose alternative model structures and to predict the system's response following management intervention.</description><subject>Animals</subject><subject>attitudes and opinions</subject><subject>Bayes Theorem</subject><subject>Bayesian belief network</subject><subject>Bayesian networks</subject><subject>Bayesian theory</subject><subject>case studies</subject><subject>Citrus</subject><subject>Conditional probabilities</subject><subject>Ecological modeling</subject><subject>Ecological risk assessment</subject><subject>ecologists</subject><subject>ecology</subject><subject>Ecology - methods</subject><subject>Ecosystem</subject><subject>Ecosystem models</subject><subject>Ecosystems</subject><subject>expert opinion</subject><subject>experts</subject><subject>feedback</subject><subject>Hemiptera</subject><subject>Herbivores</subject><subject>managers</subject><subject>mathematical models</subject><subject>model uncertainty</subject><subject>Modeling</subject><subject>Models, Biological</subject><subject>natural resource management</subject><subject>Parasite hosts</subject><subject>Parasitism</subject><subject>prediction</subject><subject>risk assessment</subject><subject>signed directed graphs</subject><subject>system feedback</subject><subject>systems analysis</subject><subject>Uncertainty</subject><subject>Wasps</subject><issn>1051-0761</issn><issn>1939-5582</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkEFv1DAQhSMEoqVw4AcAPiH1kDK2Y8c5LlVbkApF2u7ZcuzxNm02aT2Jqvx7ssoKTgjLkkd633sjvyx7z-GMmwq-QJlDYcQZf5Ed80pWuVJGvJxnUDyHUvOj7A3RPcxHCPE6O-JGSS10cZzVKyIkarot-9EHbNl6SKMfxoRs03lMg2u6YWK3d6kft3ds1c3XtRM1xG4iW0804I5dIoba-YdZC-yrm5Aa17GfODz36YHeZq-iawnfHd6TbHN5cXv-Lb--ufp-vrrOfVEKyH2NkqMsQimijgKiqqMJGOsQdcFj8AalDlVUUnpEzasSnNFCSKyDqXQtT7LPS-5j6p9GpMHuGvLYtq7DfiRbcq2ELNR_QQHaAKhyBk8X0KeeKGG0j6nZuTRZDnbfvIXS7pu3fGY_HkLHeofhL3moegbUAjw3LU7_TrIXq18CwHBTcChh9n1YfPc09OmPrwCYP8_3iz8tenS9ddvUkN2sBXAJXEOlVSV_A6JLoGY</recordid><startdate>200806</startdate><enddate>200806</enddate><creator>Hosack, Geoffrey R</creator><creator>Hayes, Keith R</creator><creator>Dambacher, Jeffrey M</creator><general>Ecological Society of America</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>200806</creationdate><title>Assessing Model Structure Uncertainty Through An Analysis Of System Feedback And Bayesian Networks</title><author>Hosack, Geoffrey R ; Hayes, Keith R ; Dambacher, Jeffrey M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4720-cbe31e34d72f6f20f5bf8defbdf641fdc8e36d9f533cee61970a86223ebd896b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Animals</topic><topic>attitudes and opinions</topic><topic>Bayes Theorem</topic><topic>Bayesian belief network</topic><topic>Bayesian networks</topic><topic>Bayesian theory</topic><topic>case studies</topic><topic>Citrus</topic><topic>Conditional probabilities</topic><topic>Ecological modeling</topic><topic>Ecological risk assessment</topic><topic>ecologists</topic><topic>ecology</topic><topic>Ecology - methods</topic><topic>Ecosystem</topic><topic>Ecosystem models</topic><topic>Ecosystems</topic><topic>expert opinion</topic><topic>experts</topic><topic>feedback</topic><topic>Hemiptera</topic><topic>Herbivores</topic><topic>managers</topic><topic>mathematical models</topic><topic>model uncertainty</topic><topic>Modeling</topic><topic>Models, Biological</topic><topic>natural resource management</topic><topic>Parasite hosts</topic><topic>Parasitism</topic><topic>prediction</topic><topic>risk assessment</topic><topic>signed directed graphs</topic><topic>system feedback</topic><topic>systems analysis</topic><topic>Uncertainty</topic><topic>Wasps</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hosack, Geoffrey R</creatorcontrib><creatorcontrib>Hayes, Keith R</creatorcontrib><creatorcontrib>Dambacher, Jeffrey M</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>Ecological applications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hosack, Geoffrey R</au><au>Hayes, Keith R</au><au>Dambacher, Jeffrey M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessing Model Structure Uncertainty Through An Analysis Of System Feedback And Bayesian Networks</atitle><jtitle>Ecological applications</jtitle><addtitle>Ecol Appl</addtitle><date>2008-06</date><risdate>2008</risdate><volume>18</volume><issue>4</issue><spage>1070</spage><epage>1082</epage><pages>1070-1082</pages><issn>1051-0761</issn><eissn>1939-5582</eissn><abstract>Ecological predictions and management strategies are sensitive to variability in model parameters as well as uncertainty in model structure. Systematic analysis of the effect of alternative model structures, however, is often beyond the resources typically available to ecologists, ecological risk practitioners, and natural resource managers. Many of these practitioners are also using Bayesian belief networks based on expert opinion to fill gaps in empirical information. The practical application of this approach can be limited by the need to populate large conditional probability tables and the complexity associated with ecological feedback cycles. In this paper, we describe a modeling approach that helps solve these problems by embedding a qualitative analysis of sign directed graphs into the probabilistic framework of a Bayesian belief network. Our approach incorporates the effects of feedback on the model's response to a sustained change in one or more of its parameters, provides an efficient means to explore the effect of alternative model structures, mitigates the cognitive bias in expert opinion, and is amenable to stakeholder input. We demonstrate our approach by examining two published case studies: a host-parasitoid community centered on a nonnative, agricultural pest of citrus cultivars and the response of an experimental lake mesocosm to nutrient input. Observations drawn from these case studies are used to diagnose alternative model structures and to predict the system's response following management intervention.</abstract><cop>United States</cop><pub>Ecological Society of America</pub><pmid>18536264</pmid><doi>10.1890/07-0482.1</doi><tpages>13</tpages></addata></record> |
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subjects | Animals attitudes and opinions Bayes Theorem Bayesian belief network Bayesian networks Bayesian theory case studies Citrus Conditional probabilities Ecological modeling Ecological risk assessment ecologists ecology Ecology - methods Ecosystem Ecosystem models Ecosystems expert opinion experts feedback Hemiptera Herbivores managers mathematical models model uncertainty Modeling Models, Biological natural resource management Parasite hosts Parasitism prediction risk assessment signed directed graphs system feedback systems analysis Uncertainty Wasps |
title | Assessing Model Structure Uncertainty Through An Analysis Of System Feedback And Bayesian Networks |
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