Type IV pili-related natural transformation systems: DNA transport in mesophilic and thermophilic bacteria
Horizontal gene flow is a driving force for bacterial adaptation. Among the three distinct mechanisms of gene transfer in bacteria, conjugation, transduction, and transformation, the latter, which includes competence induction, DNA binding, and DNA uptake, is perhaps the most versatile mechanism and...
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| Veröffentlicht in: | Archives of microbiology 2003-12, Vol.180 (6), p.385-393 |
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| creator | Averhoff, Beate Friedrich, Alexandra |
| description | Horizontal gene flow is a driving force for bacterial adaptation. Among the three distinct mechanisms of gene transfer in bacteria, conjugation, transduction, and transformation, the latter, which includes competence induction, DNA binding, and DNA uptake, is perhaps the most versatile mechanism and allows the incorporation of free DNA from diverse bacterial species. Here we review DNA transport machineries mediating uptake of naked DNA in gram-positive and gram-negative bacteria. Different putative models of transformation machineries comprising components similar to proteins of type IV pili are presented. Emphasis is placed on a comparative discussion of the underlying mechanisms of DNA transfer in mesophilic and extremely thermophilic bacteria, highlighting conserved and distinctive features of these transformation machineries. |
| doi_str_mv | 10.1007/s00203-003-0616-6 |
| format | Article |
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Among the three distinct mechanisms of gene transfer in bacteria, conjugation, transduction, and transformation, the latter, which includes competence induction, DNA binding, and DNA uptake, is perhaps the most versatile mechanism and allows the incorporation of free DNA from diverse bacterial species. Here we review DNA transport machineries mediating uptake of naked DNA in gram-positive and gram-negative bacteria. Different putative models of transformation machineries comprising components similar to proteins of type IV pili are presented. Emphasis is placed on a comparative discussion of the underlying mechanisms of DNA transfer in mesophilic and extremely thermophilic bacteria, highlighting conserved and distinctive features of these transformation machineries.</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-003-0616-6</identifier><identifier>PMID: 14593449</identifier><identifier>CODEN: AMICCW</identifier><language>eng</language><publisher>Heidelberg: Springer-Verlag</publisher><subject>Adaptation, Physiological ; Bacteria ; Bacteria - genetics ; Bacterial Physiological Phenomena ; Bacterial Proteins - genetics ; Bacterial Proteins - physiology ; Bacteriology ; Biological and medical sciences ; Biological Transport ; Deoxyribonucleic acid ; DNA ; DNA, Bacterial - genetics ; DNA, Bacterial - metabolism ; fimbriae ; Fimbriae Proteins - genetics ; Fimbriae Proteins - physiology ; Fimbriae, Bacterial - physiology ; Fundamental and applied biological sciences. Psychology ; gene flow ; gene transfer ; Gene Transfer, Horizontal ; Gram-negative bacteria ; Microbiology ; Miscellaneous ; proteins ; thermophilic bacteria ; transfer DNA ; Transformation, Bacterial</subject><ispartof>Archives of microbiology, 2003-12, Vol.180 (6), p.385-393</ispartof><rights>2004 INIST-CNRS</rights><rights>Springer-Verlag 2003</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c409t-4248ec0280e83512a4dc3ee6fd542db7255df426749f6ce684991e38eab06e9e3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15326030$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14593449$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Averhoff, Beate</creatorcontrib><creatorcontrib>Friedrich, Alexandra</creatorcontrib><title>Type IV pili-related natural transformation systems: DNA transport in mesophilic and thermophilic bacteria</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><description>Horizontal gene flow is a driving force for bacterial adaptation. Among the three distinct mechanisms of gene transfer in bacteria, conjugation, transduction, and transformation, the latter, which includes competence induction, DNA binding, and DNA uptake, is perhaps the most versatile mechanism and allows the incorporation of free DNA from diverse bacterial species. Here we review DNA transport machineries mediating uptake of naked DNA in gram-positive and gram-negative bacteria. Different putative models of transformation machineries comprising components similar to proteins of type IV pili are presented. Emphasis is placed on a comparative discussion of the underlying mechanisms of DNA transfer in mesophilic and extremely thermophilic bacteria, highlighting conserved and distinctive features of these transformation machineries.</description><subject>Adaptation, Physiological</subject><subject>Bacteria</subject><subject>Bacteria - genetics</subject><subject>Bacterial Physiological Phenomena</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - physiology</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Biological Transport</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Bacterial - metabolism</subject><subject>fimbriae</subject><subject>Fimbriae Proteins - genetics</subject><subject>Fimbriae Proteins - physiology</subject><subject>Fimbriae, Bacterial - physiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gene flow</subject><subject>gene transfer</subject><subject>Gene Transfer, Horizontal</subject><subject>Gram-negative bacteria</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>proteins</subject><subject>thermophilic bacteria</subject><subject>transfer DNA</subject><subject>Transformation, Bacterial</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkctrFTEUxoMo9lr9A9xoEHQ39eQxebgr9VUo7cJW3IXczBk7l3mZZBb3v28uc6XgxsBH4OR3Ps7JR8hrBmcMQH9MABxEBQcppir1hGyYFLwCzX89JRsQwCtjhTghL1LaATBujHlOTpisrZDSbsjudj8jvfxJ567vqoi9z9jQ0ecl-p7m6MfUTnHwuZtGmvYp45A-0c_X5-vbPMVMu5EOmKb5vlgE6seG5nuMw9_C1oeMsfMvybPW9wlfHe9Tcvf1y-3F9-rq5tvlxflVFSTYXEkuDQbgBtCImnEvmyAQVdvUkjdbzeu6aSVXWtpWBVRGWstQGPRbUGhRnJIPq-8cpz8LpuyGLgXsez_itCSnmSzrM_ZfkFnOFXBdwHf_gLtpiWNZwhnQda25tQViKxTilFLE1s2xG3zcOwbuEJdb43JwUInLqdLz5mi8bAdsHjuO-RTg_RHwKfi-LX8euvTI1aJMKKBwb1eu9ZPzv2Nh7n5wYArK0Uoy8QCNTKZQ</recordid><startdate>20031201</startdate><enddate>20031201</enddate><creator>Averhoff, Beate</creator><creator>Friedrich, Alexandra</creator><general>Springer-Verlag</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20031201</creationdate><title>Type IV pili-related natural transformation systems: DNA transport in mesophilic and thermophilic bacteria</title><author>Averhoff, Beate ; Friedrich, Alexandra</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c409t-4248ec0280e83512a4dc3ee6fd542db7255df426749f6ce684991e38eab06e9e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Adaptation, Physiological</topic><topic>Bacteria</topic><topic>Bacteria - genetics</topic><topic>Bacterial Physiological Phenomena</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - physiology</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Biological Transport</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Bacterial - metabolism</topic><topic>fimbriae</topic><topic>Fimbriae Proteins - genetics</topic><topic>Fimbriae Proteins - physiology</topic><topic>Fimbriae, Bacterial - physiology</topic><topic>Fundamental and applied biological sciences. 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| ispartof | Archives of microbiology, 2003-12, Vol.180 (6), p.385-393 |
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| subjects | Adaptation, Physiological Bacteria Bacteria - genetics Bacterial Physiological Phenomena Bacterial Proteins - genetics Bacterial Proteins - physiology Bacteriology Biological and medical sciences Biological Transport Deoxyribonucleic acid DNA DNA, Bacterial - genetics DNA, Bacterial - metabolism fimbriae Fimbriae Proteins - genetics Fimbriae Proteins - physiology Fimbriae, Bacterial - physiology Fundamental and applied biological sciences. Psychology gene flow gene transfer Gene Transfer, Horizontal Gram-negative bacteria Microbiology Miscellaneous proteins thermophilic bacteria transfer DNA Transformation, Bacterial |
| title | Type IV pili-related natural transformation systems: DNA transport in mesophilic and thermophilic bacteria |
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