Cloning and characterization of the granule-bound starch synthase II gene in rice: gene expression is regulated by the nitrogen level, sugar and circadian rhythm
A full-length coding domain sequence of a gene analogous to granule-bound starch synthase (GBSS; ADP-glucose-starch glucosyltransferase, EC 2.4.1.21) was cloned and defined as OsGBSSII based on a Nitrogen (N)-starvation-induced cDNA library constructed using the rapid subtraction hybridization metho...
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| description | A full-length coding domain sequence of a gene analogous to granule-bound starch synthase (GBSS; ADP-glucose-starch glucosyltransferase, EC 2.4.1.21) was cloned and defined as OsGBSSII based on a Nitrogen (N)-starvation-induced cDNA library constructed using the rapid subtraction hybridization method. The deduced amino acid sequence of OsGBSSII was 62—85% identical to those of GBSS proteins from other plant species. The exon/intron organization of OsGBSSII was similar to that of OsGBSSI. OsGBSSII was mainly expressed in leaves and its protein was exclusively bound to starch granules in rice leaves, which suggests that the amylose in rice leaves is synthesized by OsGBSSII. N-starvation-induced expression of OsGBSSII could be repressed by supplying nitrate, ammonia or amino acid (glutamic acid or glutamine), glucosamine (an inhibitor of hexokinase) or dark conditions. These results indicate that N-starvation induction was dependent on the photosynthetic product and hexokinase in rice leaves. Sugars induced the accumulation of OsGBSSII transcripts in excised leaves through glycolysis-dependent pathways. OsGBSSII gene expression is regulated by the circadian rhythm in rice leaves. |
| doi_str_mv | 10.1007/s00425-003-1101-9 |
| format | Article |
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The deduced amino acid sequence of OsGBSSII was 62—85% identical to those of GBSS proteins from other plant species. The exon/intron organization of OsGBSSII was similar to that of OsGBSSI. OsGBSSII was mainly expressed in leaves and its protein was exclusively bound to starch granules in rice leaves, which suggests that the amylose in rice leaves is synthesized by OsGBSSII. N-starvation-induced expression of OsGBSSII could be repressed by supplying nitrate, ammonia or amino acid (glutamic acid or glutamine), glucosamine (an inhibitor of hexokinase) or dark conditions. These results indicate that N-starvation induction was dependent on the photosynthetic product and hexokinase in rice leaves. Sugars induced the accumulation of OsGBSSII transcripts in excised leaves through glycolysis-dependent pathways. OsGBSSII gene expression is regulated by the circadian rhythm in rice leaves.</description><identifier>ISSN: 0032-0935</identifier><identifier>EISSN: 1432-2048</identifier><identifier>DOI: 10.1007/s00425-003-1101-9</identifier><identifier>PMID: 12955512</identifier><identifier>CODEN: PLANAB</identifier><language>eng</language><publisher>Berlin: Springer-Verlag</publisher><subject>Adenosine diphosphate ; Agronomy. Soil science and plant productions ; Amino Acid Sequence ; Amino acids ; Biological and medical sciences ; Carbohydrates - pharmacology ; Chromosome Mapping ; Circadian rhythm ; Circadian Rhythm - physiology ; Circadian rhythms ; Classical and quantitative genetics. Population genetics. Molecular genetics ; Cloning ; Cloning, Molecular ; Complementary DNA ; Darkness ; DNA, Complementary - chemistry ; DNA, Complementary - genetics ; Economic plant physiology ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Fundamental and applied biological sciences. Psychology ; Gene expression ; Gene expression regulation ; Gene Expression Regulation, Enzymologic - drug effects ; Gene Expression Regulation, Enzymologic - radiation effects ; Gene Expression Regulation, Plant - drug effects ; Gene Expression Regulation, Plant - radiation effects ; Generalities. Genetics. Plant material ; Genes, Plant - genetics ; Genes. Genome ; Genetics and breeding of economic plants ; Isoenzymes - genetics ; Isoenzymes - metabolism ; Leaves ; Light ; Metabolism ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; Net assimilation, photosynthesis, carbon metabolism. Photorespiration, respiration, fermentation (anoxia, hypoxia) ; Nitrogen ; Nitrogen - pharmacology ; Nutrient solutions ; Nutrition. Photosynthesis. Respiration. Metabolism ; Oryza - enzymology ; Oryza - genetics ; Oryza sativa ; Photosynthesis, respiration. Anabolism, catabolism ; Phylogeny ; Plant physiology and development ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plant species ; Proteins ; Rice ; Sequence Analysis, DNA ; Sequence Homology, Amino Acid ; Starch ; Starch Synthase - genetics ; Starch Synthase - metabolism ; Starches ; Sugar ; Sugars</subject><ispartof>Planta, 2003-12, Vol.218 (2), p.261-268</ispartof><rights>Springer-Verlag 2003</rights><rights>2004 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c407t-e91dbaa82428f6d40956cb4f297bd2c0c143130816e670efb42cd6a9784626f53</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23388311$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23388311$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,27924,27925,58017,58250</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15433386$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12955512$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dian, Weimin</creatorcontrib><creatorcontrib>Jiang, Huawu</creatorcontrib><creatorcontrib>Chen, Qingshuang</creatorcontrib><creatorcontrib>Liu, Feiyang</creatorcontrib><creatorcontrib>Wu, Ping</creatorcontrib><title>Cloning and characterization of the granule-bound starch synthase II gene in rice: gene expression is regulated by the nitrogen level, sugar and circadian rhythm</title><title>Planta</title><addtitle>Planta</addtitle><description>A full-length coding domain sequence of a gene analogous to granule-bound starch synthase (GBSS; ADP-glucose-starch glucosyltransferase, EC 2.4.1.21) was cloned and defined as OsGBSSII based on a Nitrogen (N)-starvation-induced cDNA library constructed using the rapid subtraction hybridization method. The deduced amino acid sequence of OsGBSSII was 62—85% identical to those of GBSS proteins from other plant species. The exon/intron organization of OsGBSSII was similar to that of OsGBSSI. OsGBSSII was mainly expressed in leaves and its protein was exclusively bound to starch granules in rice leaves, which suggests that the amylose in rice leaves is synthesized by OsGBSSII. N-starvation-induced expression of OsGBSSII could be repressed by supplying nitrate, ammonia or amino acid (glutamic acid or glutamine), glucosamine (an inhibitor of hexokinase) or dark conditions. These results indicate that N-starvation induction was dependent on the photosynthetic product and hexokinase in rice leaves. Sugars induced the accumulation of OsGBSSII transcripts in excised leaves through glycolysis-dependent pathways. OsGBSSII gene expression is regulated by the circadian rhythm in rice leaves.</description><subject>Adenosine diphosphate</subject><subject>Agronomy. Soil science and plant productions</subject><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Biological and medical sciences</subject><subject>Carbohydrates - pharmacology</subject><subject>Chromosome Mapping</subject><subject>Circadian rhythm</subject><subject>Circadian Rhythm - physiology</subject><subject>Circadian rhythms</subject><subject>Classical and quantitative genetics. Population genetics. Molecular genetics</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>Complementary DNA</subject><subject>Darkness</subject><subject>DNA, Complementary - chemistry</subject><subject>DNA, Complementary - genetics</subject><subject>Economic plant physiology</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene expression</subject><subject>Gene expression regulation</subject><subject>Gene Expression Regulation, Enzymologic - drug effects</subject><subject>Gene Expression Regulation, Enzymologic - radiation effects</subject><subject>Gene Expression Regulation, Plant - drug effects</subject><subject>Gene Expression Regulation, Plant - radiation effects</subject><subject>Generalities. Genetics. Plant material</subject><subject>Genes, Plant - genetics</subject><subject>Genes. Genome</subject><subject>Genetics and breeding of economic plants</subject><subject>Isoenzymes - genetics</subject><subject>Isoenzymes - metabolism</subject><subject>Leaves</subject><subject>Light</subject><subject>Metabolism</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Net assimilation, photosynthesis, carbon metabolism. Photorespiration, respiration, fermentation (anoxia, hypoxia)</subject><subject>Nitrogen</subject><subject>Nitrogen - pharmacology</subject><subject>Nutrient solutions</subject><subject>Nutrition. Photosynthesis. Respiration. Metabolism</subject><subject>Oryza - enzymology</subject><subject>Oryza - genetics</subject><subject>Oryza sativa</subject><subject>Photosynthesis, respiration. Anabolism, catabolism</subject><subject>Phylogeny</subject><subject>Plant physiology and development</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant species</subject><subject>Proteins</subject><subject>Rice</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Amino Acid</subject><subject>Starch</subject><subject>Starch Synthase - genetics</subject><subject>Starch Synthase - metabolism</subject><subject>Starches</subject><subject>Sugar</subject><subject>Sugars</subject><issn>0032-0935</issn><issn>1432-2048</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkU-r1DAUxYMovvHpB3ChBEFXVm_StE3fTgb_DDxwo-uQprdthk4yJqk4fhu_qRk7-MCNqxDO7x7O4RDylMEbBtC8jQCCVwVAWTAGrGjvkQ0TJS84CHmfbLLAC2jL6oo8inEPkMWmeUiuGG-rqmJ8Q35tZ--sG6l2PTWTDtokDPanTtY76geaJqRj0G6Zsej8kqmYdDATjSeXJh2R7nZ0RIfUOhqswZv1hz-OAWM8u9hIA47LrBP2tDv9sXQ2BZ9BOuN3nF_TuIw6rCFsMLq3OrtNpzQdHpMHg54jPrm81-Trh_dftp-K288fd9t3t4UR0KQCW9Z3WksuuBzqXkBb1aYTA2-brucGTO7OSpCsxroBHDrBTV_rtpGi5vVQldfk1ep7DP7bgjGpg40G51k79EtUDROiLEX9X5BJyCE4z-CLf8C9X4LLJZTkIOtKMJYhtkIm-BgDDuoY7EGHk2KgziurdWWVx1TnlVWbb55fjJfugP3dxWXWDLy8ADoaPQ95P2PjHVflJqU8V3m2cvuYfPir8yzKMof7DZHGugU</recordid><startdate>20031201</startdate><enddate>20031201</enddate><creator>Dian, Weimin</creator><creator>Jiang, Huawu</creator><creator>Chen, Qingshuang</creator><creator>Liu, Feiyang</creator><creator>Wu, Ping</creator><general>Springer-Verlag</general><general>Springer</general><general>Springer Nature B.V</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20031201</creationdate><title>Cloning and characterization of the granule-bound starch synthase II gene in rice: gene expression is regulated by the nitrogen level, sugar and circadian rhythm</title><author>Dian, Weimin ; Jiang, Huawu ; Chen, Qingshuang ; Liu, Feiyang ; Wu, Ping</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c407t-e91dbaa82428f6d40956cb4f297bd2c0c143130816e670efb42cd6a9784626f53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Adenosine diphosphate</topic><topic>Agronomy. Soil science and plant productions</topic><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Biological and medical sciences</topic><topic>Carbohydrates - pharmacology</topic><topic>Chromosome Mapping</topic><topic>Circadian rhythm</topic><topic>Circadian Rhythm - physiology</topic><topic>Circadian rhythms</topic><topic>Classical and quantitative genetics. Population genetics. Molecular genetics</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>Complementary DNA</topic><topic>Darkness</topic><topic>DNA, Complementary - chemistry</topic><topic>DNA, Complementary - genetics</topic><topic>Economic plant physiology</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene expression</topic><topic>Gene expression regulation</topic><topic>Gene Expression Regulation, Enzymologic - drug effects</topic><topic>Gene Expression Regulation, Enzymologic - radiation effects</topic><topic>Gene Expression Regulation, Plant - drug effects</topic><topic>Gene Expression Regulation, Plant - radiation effects</topic><topic>Generalities. Genetics. Plant material</topic><topic>Genes, Plant - genetics</topic><topic>Genes. Genome</topic><topic>Genetics and breeding of economic plants</topic><topic>Isoenzymes - genetics</topic><topic>Isoenzymes - metabolism</topic><topic>Leaves</topic><topic>Light</topic><topic>Metabolism</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>Net assimilation, photosynthesis, carbon metabolism. Photorespiration, respiration, fermentation (anoxia, hypoxia)</topic><topic>Nitrogen</topic><topic>Nitrogen - pharmacology</topic><topic>Nutrient solutions</topic><topic>Nutrition. Photosynthesis. Respiration. Metabolism</topic><topic>Oryza - enzymology</topic><topic>Oryza - genetics</topic><topic>Oryza sativa</topic><topic>Photosynthesis, respiration. Anabolism, catabolism</topic><topic>Phylogeny</topic><topic>Plant physiology and development</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Plant species</topic><topic>Proteins</topic><topic>Rice</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Amino Acid</topic><topic>Starch</topic><topic>Starch Synthase - genetics</topic><topic>Starch Synthase - metabolism</topic><topic>Starches</topic><topic>Sugar</topic><topic>Sugars</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dian, Weimin</creatorcontrib><creatorcontrib>Jiang, Huawu</creatorcontrib><creatorcontrib>Chen, Qingshuang</creatorcontrib><creatorcontrib>Liu, Feiyang</creatorcontrib><creatorcontrib>Wu, Ping</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Planta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dian, Weimin</au><au>Jiang, Huawu</au><au>Chen, Qingshuang</au><au>Liu, Feiyang</au><au>Wu, Ping</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning and characterization of the granule-bound starch synthase II gene in rice: gene expression is regulated by the nitrogen level, sugar and circadian rhythm</atitle><jtitle>Planta</jtitle><addtitle>Planta</addtitle><date>2003-12-01</date><risdate>2003</risdate><volume>218</volume><issue>2</issue><spage>261</spage><epage>268</epage><pages>261-268</pages><issn>0032-0935</issn><eissn>1432-2048</eissn><coden>PLANAB</coden><abstract>A full-length coding domain sequence of a gene analogous to granule-bound starch synthase (GBSS; ADP-glucose-starch glucosyltransferase, EC 2.4.1.21) was cloned and defined as OsGBSSII based on a Nitrogen (N)-starvation-induced cDNA library constructed using the rapid subtraction hybridization method. The deduced amino acid sequence of OsGBSSII was 62—85% identical to those of GBSS proteins from other plant species. The exon/intron organization of OsGBSSII was similar to that of OsGBSSI. OsGBSSII was mainly expressed in leaves and its protein was exclusively bound to starch granules in rice leaves, which suggests that the amylose in rice leaves is synthesized by OsGBSSII. N-starvation-induced expression of OsGBSSII could be repressed by supplying nitrate, ammonia or amino acid (glutamic acid or glutamine), glucosamine (an inhibitor of hexokinase) or dark conditions. These results indicate that N-starvation induction was dependent on the photosynthetic product and hexokinase in rice leaves. Sugars induced the accumulation of OsGBSSII transcripts in excised leaves through glycolysis-dependent pathways. OsGBSSII gene expression is regulated by the circadian rhythm in rice leaves.</abstract><cop>Berlin</cop><pub>Springer-Verlag</pub><pmid>12955512</pmid><doi>10.1007/s00425-003-1101-9</doi><tpages>8</tpages></addata></record> |
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| subjects | Adenosine diphosphate Agronomy. Soil science and plant productions Amino Acid Sequence Amino acids Biological and medical sciences Carbohydrates - pharmacology Chromosome Mapping Circadian rhythm Circadian Rhythm - physiology Circadian rhythms Classical and quantitative genetics. Population genetics. Molecular genetics Cloning Cloning, Molecular Complementary DNA Darkness DNA, Complementary - chemistry DNA, Complementary - genetics Economic plant physiology Escherichia coli - genetics Escherichia coli - metabolism Fundamental and applied biological sciences. Psychology Gene expression Gene expression regulation Gene Expression Regulation, Enzymologic - drug effects Gene Expression Regulation, Enzymologic - radiation effects Gene Expression Regulation, Plant - drug effects Gene Expression Regulation, Plant - radiation effects Generalities. Genetics. Plant material Genes, Plant - genetics Genes. Genome Genetics and breeding of economic plants Isoenzymes - genetics Isoenzymes - metabolism Leaves Light Metabolism Molecular and cellular biology Molecular genetics Molecular Sequence Data Net assimilation, photosynthesis, carbon metabolism. Photorespiration, respiration, fermentation (anoxia, hypoxia) Nitrogen Nitrogen - pharmacology Nutrient solutions Nutrition. Photosynthesis. Respiration. Metabolism Oryza - enzymology Oryza - genetics Oryza sativa Photosynthesis, respiration. Anabolism, catabolism Phylogeny Plant physiology and development Plant Proteins - genetics Plant Proteins - metabolism Plant species Proteins Rice Sequence Analysis, DNA Sequence Homology, Amino Acid Starch Starch Synthase - genetics Starch Synthase - metabolism Starches Sugar Sugars |
| title | Cloning and characterization of the granule-bound starch synthase II gene in rice: gene expression is regulated by the nitrogen level, sugar and circadian rhythm |
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