Highly Efficient Antibody-Catalyzed Deuteration of Carbonyl Compounds
Antibody 38C2 efficiently catalyzes deuterium‐exchange reactions at the α position of a variety of ketones and aldehydes, including substrates that have a variety of sensitive functional groups. In addition to the regio‐ and chemoselectivity of these reactions, the catalytic rates (kcat) and rate‐en...
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Veröffentlicht in: | Chemistry : a European journal 2002-01, Vol.8 (1), p.229-239 |
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description | Antibody 38C2 efficiently catalyzes deuterium‐exchange reactions at the α position of a variety of ketones and aldehydes, including substrates that have a variety of sensitive functional groups. In addition to the regio‐ and chemoselectivity of these reactions, the catalytic rates (kcat) and rate‐enhancement values (kcat/kun) are among the highest values ever observed with catalytic antibodies. Comparison of the substrate range of the catalytic antibody with highly evolved aldolase enzymes, such as rabbit‐muscle aldolase, highlights the much broader practical scope of the antibody, which accepts a wide range of substrates. The hydrogen‐exchange reaction was used for calibration and mapping of the antibody active site. Isotope‐exchange experiments with cycloheptanone reveal that the formation of the Schiff base species (as concluded from the 16O/18O exchange rate at the carbonyl oxygen) is much faster than the formation of the enamine intermediate (as concluded from the H/D exchange rate), and both steps are faster than the antibody‐catalyzed aldol addition reaction.
High regio‐ and chemoselectivity, catalytic rates, and rate‐enhancement values are obtained when the catalytic antibody 38C2 is used to catalyze the deuterium‐exchange reaction at the α position of a wide range of ketones and aldehydes, as shown, even in substrates that have sensitive functional groups. |
doi_str_mv | 10.1002/1521-3765(20020104)8:1<229::AID-CHEM229>3.0.CO;2-P |
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High regio‐ and chemoselectivity, catalytic rates, and rate‐enhancement values are obtained when the catalytic antibody 38C2 is used to catalyze the deuterium‐exchange reaction at the α position of a wide range of ketones and aldehydes, as shown, even in substrates that have sensitive functional groups.</description><identifier>ISSN: 0947-6539</identifier><identifier>EISSN: 1521-3765</identifier><identifier>DOI: 10.1002/1521-3765(20020104)8:1<229::AID-CHEM229>3.0.CO;2-P</identifier><identifier>PMID: 11822454</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag GmbH</publisher><subject>Aldehydes - chemistry ; aldol reaction ; Animals ; Antibodies, Catalytic - chemistry ; Antibodies, Catalytic - metabolism ; Catalysis ; catalytic antibodies ; Chemical Phenomena ; Chemistry, Physical ; Cycloheptanes - chemistry ; deuterium ; Deuterium - chemistry ; Fructose-Bisphosphate Aldolase - chemistry ; Fructose-Bisphosphate Aldolase - metabolism ; Hexanones - chemistry ; Immunoglobulin Fab Fragments - chemistry ; Immunoglobulin Fab Fragments - metabolism ; isotopic labeling ; Ketones - chemistry ; Magnetic Resonance Spectroscopy ; Mass Spectrometry ; Methyl n-Butyl Ketone ; Models, Molecular ; Molecular Structure ; Muscles - enzymology ; Rabbits ; reaction mechanisms ; Substrate Specificity ; Time Factors</subject><ispartof>Chemistry : a European journal, 2002-01, Vol.8 (1), p.229-239</ispartof><rights>2002 WILEY‐VCH Verlag GmbH, Weinheim, Fed. Rep. of Germany</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c4679-6d6bbe35b32e00463cb711d6a8ac9d83ce64740511c8210d80933e70e25ca70b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2F1521-3765%2820020104%298%3A1%3C229%3A%3AAID-CHEM229%3E3.0.CO%3B2-P$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2F1521-3765%2820020104%298%3A1%3C229%3A%3AAID-CHEM229%3E3.0.CO%3B2-P$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11822454$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Shulman, Avidor</creatorcontrib><creatorcontrib>Sitry, Danielle</creatorcontrib><creatorcontrib>Shulman, Hagit</creatorcontrib><creatorcontrib>Keinan, Ehud</creatorcontrib><title>Highly Efficient Antibody-Catalyzed Deuteration of Carbonyl Compounds</title><title>Chemistry : a European journal</title><addtitle>Chem. Eur. J</addtitle><description>Antibody 38C2 efficiently catalyzes deuterium‐exchange reactions at the α position of a variety of ketones and aldehydes, including substrates that have a variety of sensitive functional groups. In addition to the regio‐ and chemoselectivity of these reactions, the catalytic rates (kcat) and rate‐enhancement values (kcat/kun) are among the highest values ever observed with catalytic antibodies. Comparison of the substrate range of the catalytic antibody with highly evolved aldolase enzymes, such as rabbit‐muscle aldolase, highlights the much broader practical scope of the antibody, which accepts a wide range of substrates. The hydrogen‐exchange reaction was used for calibration and mapping of the antibody active site. Isotope‐exchange experiments with cycloheptanone reveal that the formation of the Schiff base species (as concluded from the 16O/18O exchange rate at the carbonyl oxygen) is much faster than the formation of the enamine intermediate (as concluded from the H/D exchange rate), and both steps are faster than the antibody‐catalyzed aldol addition reaction.
High regio‐ and chemoselectivity, catalytic rates, and rate‐enhancement values are obtained when the catalytic antibody 38C2 is used to catalyze the deuterium‐exchange reaction at the α position of a wide range of ketones and aldehydes, as shown, even in substrates that have sensitive functional groups.</description><subject>Aldehydes - chemistry</subject><subject>aldol reaction</subject><subject>Animals</subject><subject>Antibodies, Catalytic - chemistry</subject><subject>Antibodies, Catalytic - metabolism</subject><subject>Catalysis</subject><subject>catalytic antibodies</subject><subject>Chemical Phenomena</subject><subject>Chemistry, Physical</subject><subject>Cycloheptanes - chemistry</subject><subject>deuterium</subject><subject>Deuterium - chemistry</subject><subject>Fructose-Bisphosphate Aldolase - chemistry</subject><subject>Fructose-Bisphosphate Aldolase - metabolism</subject><subject>Hexanones - chemistry</subject><subject>Immunoglobulin Fab Fragments - chemistry</subject><subject>Immunoglobulin Fab Fragments - metabolism</subject><subject>isotopic labeling</subject><subject>Ketones - chemistry</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>Mass Spectrometry</subject><subject>Methyl n-Butyl Ketone</subject><subject>Models, Molecular</subject><subject>Molecular Structure</subject><subject>Muscles - enzymology</subject><subject>Rabbits</subject><subject>reaction mechanisms</subject><subject>Substrate Specificity</subject><subject>Time Factors</subject><issn>0947-6539</issn><issn>1521-3765</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqVkE1v00AQhleIiobCX0A-IXpwmNn17toBVYrckFQNTYX4OI7W6zUYHDt4bYH59ThK2l64cBrN6J3nlR7GZghTBOCvUXIMhVbyFR9XQIjO4xm-5TyZzeZXl2G6WrwflwsxhWm6ecPD20dscv_0mE0giXSopEhO2VPvvwNAooR4wk4RY84jGU3YYlV-_VYNwaIoSlu6ugvmdVdmTT6EqelMNfxxeXDp-s61piubOmiKIDVt1tRDFaTNdtf0de6fsZPCVN49P84z9und4mO6Cteb5VU6X4c2UjoJVa6yzAmZCe4AIiVsphFzZWJjkzwW1qlIRyARbcwR8hgSIZwGx6U1GjJxxl4euLu2-dk739G29NZVlald03vSGHEuUY7BD4egbRvvW1fQri23ph0IgfZyae-J9p7oTi7FhDT6JBrl0lEuCQJKN8TpdoS-OLb32dblD8ijzTHw-RD4VVZu-J_KfzfenUZweACXvnO_78Gm_UFKCy3py82ScHkdX9-skaT4Cw_FoOA</recordid><startdate>20020104</startdate><enddate>20020104</enddate><creator>Shulman, Avidor</creator><creator>Sitry, Danielle</creator><creator>Shulman, Hagit</creator><creator>Keinan, Ehud</creator><general>WILEY-VCH Verlag GmbH</general><general>WILEY‐VCH Verlag GmbH</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20020104</creationdate><title>Highly Efficient Antibody-Catalyzed Deuteration of Carbonyl Compounds</title><author>Shulman, Avidor ; Sitry, Danielle ; Shulman, Hagit ; Keinan, Ehud</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4679-6d6bbe35b32e00463cb711d6a8ac9d83ce64740511c8210d80933e70e25ca70b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Aldehydes - chemistry</topic><topic>aldol reaction</topic><topic>Animals</topic><topic>Antibodies, Catalytic - chemistry</topic><topic>Antibodies, Catalytic - metabolism</topic><topic>Catalysis</topic><topic>catalytic antibodies</topic><topic>Chemical Phenomena</topic><topic>Chemistry, Physical</topic><topic>Cycloheptanes - chemistry</topic><topic>deuterium</topic><topic>Deuterium - chemistry</topic><topic>Fructose-Bisphosphate Aldolase - chemistry</topic><topic>Fructose-Bisphosphate Aldolase - metabolism</topic><topic>Hexanones - chemistry</topic><topic>Immunoglobulin Fab Fragments - chemistry</topic><topic>Immunoglobulin Fab Fragments - metabolism</topic><topic>isotopic labeling</topic><topic>Ketones - chemistry</topic><topic>Magnetic Resonance Spectroscopy</topic><topic>Mass Spectrometry</topic><topic>Methyl n-Butyl Ketone</topic><topic>Models, Molecular</topic><topic>Molecular Structure</topic><topic>Muscles - enzymology</topic><topic>Rabbits</topic><topic>reaction mechanisms</topic><topic>Substrate Specificity</topic><topic>Time Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Shulman, Avidor</creatorcontrib><creatorcontrib>Sitry, Danielle</creatorcontrib><creatorcontrib>Shulman, Hagit</creatorcontrib><creatorcontrib>Keinan, Ehud</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Chemistry : a European journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shulman, Avidor</au><au>Sitry, Danielle</au><au>Shulman, Hagit</au><au>Keinan, Ehud</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Highly Efficient Antibody-Catalyzed Deuteration of Carbonyl Compounds</atitle><jtitle>Chemistry : a European journal</jtitle><addtitle>Chem. Eur. J</addtitle><date>2002-01-04</date><risdate>2002</risdate><volume>8</volume><issue>1</issue><spage>229</spage><epage>239</epage><pages>229-239</pages><issn>0947-6539</issn><eissn>1521-3765</eissn><abstract>Antibody 38C2 efficiently catalyzes deuterium‐exchange reactions at the α position of a variety of ketones and aldehydes, including substrates that have a variety of sensitive functional groups. In addition to the regio‐ and chemoselectivity of these reactions, the catalytic rates (kcat) and rate‐enhancement values (kcat/kun) are among the highest values ever observed with catalytic antibodies. Comparison of the substrate range of the catalytic antibody with highly evolved aldolase enzymes, such as rabbit‐muscle aldolase, highlights the much broader practical scope of the antibody, which accepts a wide range of substrates. The hydrogen‐exchange reaction was used for calibration and mapping of the antibody active site. Isotope‐exchange experiments with cycloheptanone reveal that the formation of the Schiff base species (as concluded from the 16O/18O exchange rate at the carbonyl oxygen) is much faster than the formation of the enamine intermediate (as concluded from the H/D exchange rate), and both steps are faster than the antibody‐catalyzed aldol addition reaction.
High regio‐ and chemoselectivity, catalytic rates, and rate‐enhancement values are obtained when the catalytic antibody 38C2 is used to catalyze the deuterium‐exchange reaction at the α position of a wide range of ketones and aldehydes, as shown, even in substrates that have sensitive functional groups.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag GmbH</pub><pmid>11822454</pmid><doi>10.1002/1521-3765(20020104)8:1<229::AID-CHEM229>3.0.CO;2-P</doi><tpages>11</tpages></addata></record> |
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subjects | Aldehydes - chemistry aldol reaction Animals Antibodies, Catalytic - chemistry Antibodies, Catalytic - metabolism Catalysis catalytic antibodies Chemical Phenomena Chemistry, Physical Cycloheptanes - chemistry deuterium Deuterium - chemistry Fructose-Bisphosphate Aldolase - chemistry Fructose-Bisphosphate Aldolase - metabolism Hexanones - chemistry Immunoglobulin Fab Fragments - chemistry Immunoglobulin Fab Fragments - metabolism isotopic labeling Ketones - chemistry Magnetic Resonance Spectroscopy Mass Spectrometry Methyl n-Butyl Ketone Models, Molecular Molecular Structure Muscles - enzymology Rabbits reaction mechanisms Substrate Specificity Time Factors |
title | Highly Efficient Antibody-Catalyzed Deuteration of Carbonyl Compounds |
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