Differential Regulation of Transcripts Encoding Cytosolic NADP-Malic Enzyme in C₃ and C₄ Flaveria Species
A cytosolic NADP-malic enzyme (CYTME) has been described previously in several plants, all C3 species. CYTME is distinct from the chloroplastic NADP-malic enzyme (CHLME) that is highly active in C4 species. We show that at least one CytMe gene is present in all Flaveria spp., including C3, C4, and C...
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description | A cytosolic NADP-malic enzyme (CYTME) has been described previously in several plants, all C3 species. CYTME is distinct from the chloroplastic NADP-malic enzyme (CHLME) that is highly active in C4 species. We show that at least one CytMe gene is present in all Flaveria spp., including C3, C4, and C3-C4 intermediate types. Based on the CytMe expression patterns in Flaveria pringlei (C3) and Flaveria trinervia (C4), we suggest CYTME has several distinct roles, including the supplying of NADPH for cytosolic metabolism, the supporting of wound response or repair, and the balancing of cellular pH in illuminated leaves. These three roles are likely correlated with CytMe mRNAs of apparent sizes 2.0, 2.2, and 2.4 kb, respectively, which differ in the length of the 5′ untranslated regions. Various regulatory mechanisms involving RNA processing and translational efficiency are discussed. |
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Lorraine Tausta ; Nelson, Timothy M.</creator><creatorcontrib>Lai, Lien B. ; S. Lorraine Tausta ; Nelson, Timothy M.</creatorcontrib><description>A cytosolic NADP-malic enzyme (CYTME) has been described previously in several plants, all C3 species. CYTME is distinct from the chloroplastic NADP-malic enzyme (CHLME) that is highly active in C4 species. We show that at least one CytMe gene is present in all Flaveria spp., including C3, C4, and C3-C4 intermediate types. Based on the CytMe expression patterns in Flaveria pringlei (C3) and Flaveria trinervia (C4), we suggest CYTME has several distinct roles, including the supplying of NADPH for cytosolic metabolism, the supporting of wound response or repair, and the balancing of cellular pH in illuminated leaves. These three roles are likely correlated with CytMe mRNAs of apparent sizes 2.0, 2.2, and 2.4 kb, respectively, which differ in the length of the 5′ untranslated regions. Various regulatory mechanisms involving RNA processing and translational efficiency are discussed.</description><identifier>ISSN: 0032-0889</identifier><identifier>EISSN: 1532-2548</identifier><identifier>DOI: 10.1104/pp.010449</identifier><identifier>PMID: 11788759</identifier><identifier>CODEN: PPHYA5</identifier><language>eng</language><publisher>Rockville, MD: American Society of Plant Biologists</publisher><subject>Adaptation, Physiological ; Asteraceae - enzymology ; Asteraceae - genetics ; Base Sequence ; Biochemical Processes and Macromolecular Structures ; Biological and medical sciences ; Biological taxonomies ; Blotting, Northern ; Chloroplasts - enzymology ; Cloning, Molecular ; Complementary DNA ; Cytosol - enzymology ; DNA, Complementary - chemistry ; DNA, Complementary - genetics ; Enzymes ; Fundamental and applied biological sciences. Psychology ; Gene expression regulation ; Gene Expression Regulation, Enzymologic - radiation effects ; Gene Expression Regulation, Plant - radiation effects ; Genes. Genome ; Leaves ; Light ; Malate Dehydrogenase - genetics ; Malate Dehydrogenase - metabolism ; Messenger RNA ; Metabolism ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; Multigene Family ; Photosynthesis - genetics ; Photosynthesis, respiration. Anabolism, catabolism ; Plant Leaves - enzymology ; Plant Leaves - genetics ; Plant Leaves - growth & development ; Plant physiology and development ; Plants ; Protein isoforms ; RNA ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Sequence Alignment ; Sequence Analysis, DNA ; Sequence Homology, Nucleic Acid ; Untranslated regions</subject><ispartof>Plant physiology (Bethesda), 2002-01, Vol.128 (1), p.140-149</ispartof><rights>Copyright 2002 American Society of Plant Biologists</rights><rights>2002 INIST-CNRS</rights><rights>Copyright American Society of Plant Physiologists Jan 2002</rights><rights>Copyright © 2002, American Society of Plant Physiologists 2002</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c518t-211958756daf0097a82263470b2409039e9b312f6e4682c9dd0777b0f1ac167f3</citedby><cites>FETCH-LOGICAL-c518t-211958756daf0097a82263470b2409039e9b312f6e4682c9dd0777b0f1ac167f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/4280275$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/4280275$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,780,784,803,885,4022,27922,27923,27924,58016,58249</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=13447170$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11788759$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lai, Lien B.</creatorcontrib><creatorcontrib>S. Lorraine Tausta</creatorcontrib><creatorcontrib>Nelson, Timothy M.</creatorcontrib><title>Differential Regulation of Transcripts Encoding Cytosolic NADP-Malic Enzyme in C₃ and C₄ Flaveria Species</title><title>Plant physiology (Bethesda)</title><addtitle>Plant Physiol</addtitle><description>A cytosolic NADP-malic enzyme (CYTME) has been described previously in several plants, all C3 species. CYTME is distinct from the chloroplastic NADP-malic enzyme (CHLME) that is highly active in C4 species. We show that at least one CytMe gene is present in all Flaveria spp., including C3, C4, and C3-C4 intermediate types. Based on the CytMe expression patterns in Flaveria pringlei (C3) and Flaveria trinervia (C4), we suggest CYTME has several distinct roles, including the supplying of NADPH for cytosolic metabolism, the supporting of wound response or repair, and the balancing of cellular pH in illuminated leaves. These three roles are likely correlated with CytMe mRNAs of apparent sizes 2.0, 2.2, and 2.4 kb, respectively, which differ in the length of the 5′ untranslated regions. Various regulatory mechanisms involving RNA processing and translational efficiency are discussed.</description><subject>Adaptation, Physiological</subject><subject>Asteraceae - enzymology</subject><subject>Asteraceae - genetics</subject><subject>Base Sequence</subject><subject>Biochemical Processes and Macromolecular Structures</subject><subject>Biological and medical sciences</subject><subject>Biological taxonomies</subject><subject>Blotting, Northern</subject><subject>Chloroplasts - enzymology</subject><subject>Cloning, Molecular</subject><subject>Complementary DNA</subject><subject>Cytosol - enzymology</subject><subject>DNA, Complementary - chemistry</subject><subject>DNA, Complementary - genetics</subject><subject>Enzymes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene expression regulation</subject><subject>Gene Expression Regulation, Enzymologic - radiation effects</subject><subject>Gene Expression Regulation, Plant - radiation effects</subject><subject>Genes. Genome</subject><subject>Leaves</subject><subject>Light</subject><subject>Malate Dehydrogenase - genetics</subject><subject>Malate Dehydrogenase - metabolism</subject><subject>Messenger RNA</subject><subject>Metabolism</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family</subject><subject>Photosynthesis - genetics</subject><subject>Photosynthesis, respiration. 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Lorraine Tausta ; Nelson, Timothy M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c518t-211958756daf0097a82263470b2409039e9b312f6e4682c9dd0777b0f1ac167f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Adaptation, Physiological</topic><topic>Asteraceae - enzymology</topic><topic>Asteraceae - genetics</topic><topic>Base Sequence</topic><topic>Biochemical Processes and Macromolecular Structures</topic><topic>Biological and medical sciences</topic><topic>Biological taxonomies</topic><topic>Blotting, Northern</topic><topic>Chloroplasts - enzymology</topic><topic>Cloning, Molecular</topic><topic>Complementary DNA</topic><topic>Cytosol - enzymology</topic><topic>DNA, Complementary - chemistry</topic><topic>DNA, Complementary - genetics</topic><topic>Enzymes</topic><topic>Fundamental and applied biological sciences. 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Anabolism, catabolism</topic><topic>Plant Leaves - enzymology</topic><topic>Plant Leaves - genetics</topic><topic>Plant Leaves - growth & development</topic><topic>Plant physiology and development</topic><topic>Plants</topic><topic>Protein isoforms</topic><topic>RNA</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Untranslated regions</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lai, Lien B.</creatorcontrib><creatorcontrib>S. 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Lorraine Tausta</au><au>Nelson, Timothy M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Differential Regulation of Transcripts Encoding Cytosolic NADP-Malic Enzyme in C₃ and C₄ Flaveria Species</atitle><jtitle>Plant physiology (Bethesda)</jtitle><addtitle>Plant Physiol</addtitle><date>2002-01-01</date><risdate>2002</risdate><volume>128</volume><issue>1</issue><spage>140</spage><epage>149</epage><pages>140-149</pages><issn>0032-0889</issn><eissn>1532-2548</eissn><coden>PPHYA5</coden><abstract>A cytosolic NADP-malic enzyme (CYTME) has been described previously in several plants, all C3 species. CYTME is distinct from the chloroplastic NADP-malic enzyme (CHLME) that is highly active in C4 species. We show that at least one CytMe gene is present in all Flaveria spp., including C3, C4, and C3-C4 intermediate types. Based on the CytMe expression patterns in Flaveria pringlei (C3) and Flaveria trinervia (C4), we suggest CYTME has several distinct roles, including the supplying of NADPH for cytosolic metabolism, the supporting of wound response or repair, and the balancing of cellular pH in illuminated leaves. These three roles are likely correlated with CytMe mRNAs of apparent sizes 2.0, 2.2, and 2.4 kb, respectively, which differ in the length of the 5′ untranslated regions. Various regulatory mechanisms involving RNA processing and translational efficiency are discussed.</abstract><cop>Rockville, MD</cop><pub>American Society of Plant Biologists</pub><pmid>11788759</pmid><doi>10.1104/pp.010449</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; JSTOR Archive Collection A-Z Listing; Oxford University Press Journals All Titles (1996-Current) |
subjects | Adaptation, Physiological Asteraceae - enzymology Asteraceae - genetics Base Sequence Biochemical Processes and Macromolecular Structures Biological and medical sciences Biological taxonomies Blotting, Northern Chloroplasts - enzymology Cloning, Molecular Complementary DNA Cytosol - enzymology DNA, Complementary - chemistry DNA, Complementary - genetics Enzymes Fundamental and applied biological sciences. Psychology Gene expression regulation Gene Expression Regulation, Enzymologic - radiation effects Gene Expression Regulation, Plant - radiation effects Genes. Genome Leaves Light Malate Dehydrogenase - genetics Malate Dehydrogenase - metabolism Messenger RNA Metabolism Molecular and cellular biology Molecular genetics Molecular Sequence Data Multigene Family Photosynthesis - genetics Photosynthesis, respiration. Anabolism, catabolism Plant Leaves - enzymology Plant Leaves - genetics Plant Leaves - growth & development Plant physiology and development Plants Protein isoforms RNA RNA, Messenger - genetics RNA, Messenger - metabolism Sequence Alignment Sequence Analysis, DNA Sequence Homology, Nucleic Acid Untranslated regions |
title | Differential Regulation of Transcripts Encoding Cytosolic NADP-Malic Enzyme in C₃ and C₄ Flaveria Species |
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