Novel Mutations in the CHST6 Gene Associated With Macular Corneal Dystrophy in Southern India
OBJECTIVE To further characterize the role of the carbohydrate sulfotransferase(CHST6) gene in macular corneal dystrophy (MCD) through identification of causative mutations in a cohort of affected patients from southern India. METHODS Genomic DNA was extracted from buccal epithelium of 75 patients (...
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description | OBJECTIVE To further characterize the role of the carbohydrate sulfotransferase(CHST6) gene in macular corneal dystrophy (MCD) through identification of causative mutations in a cohort of affected patients from southern India. METHODS Genomic DNA was extracted from buccal epithelium of 75 patients (51 families) with MCD, 33 unaffected relatives, and 48 healthy volunteers. The coding region of the CHST6 gene was evaluated by means of polymerase chain reaction amplification and direct sequencing. Subtyping of MCD into types I and II was performed by measuring serum levels of antigenic keratan sulfate. RESULTS Seventy patients were classified as having type I MCD, and 5 patients as having type II MCD. Analysis of the CHST6 coding region in patients with type I MCD identified 11 homozygous missense mutations(Leu22Arg, His42Tyr, Arg50Cys, Arg50Leu, Ser53Leu, Arg97Pro, Cys102Tyr, Arg127Cys, Arg205Gln, His249Pro, and Glu274Lys), 2 compound heterozygous missense mutations(Arg93His and Ala206Thr), 5 homozygous deletion mutations (del CG707-708, del C890, del A1237, del1748-1770, and del ORF), and 2 homozygous replacement mutations(ACCTAC 1273 GGT, and GCG 1304 AT). One patient with type II MCD was heterozygous for the C890 deletion mutation, whereas 4 possessed no CHST6 coding region mutations. CONCLUSION A variety of previously unreported mutations in the coding region of the CHST6 gene are associated with type I MCD in a cohort of patients in southern India. CLINICAL RELEVANCE An improved understanding of the genetic basis of MCD allows for earlier, more accurate diagnosis of affected individuals, and may provide the foundation for the development of novel disease treatments.Arch Ophthalmol.2003;121:1608-1612
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--></description><identifier>ISSN: 0003-9950</identifier><identifier>ISSN: 2168-6165</identifier><identifier>EISSN: 1538-3601</identifier><identifier>EISSN: 2168-6173</identifier><identifier>DOI: 10.1001/archopht.121.11.1608</identifier><identifier>PMID: 14609920</identifier><language>eng</language><publisher>Chicago, IL: American Medical Association</publisher><subject>Biological and medical sciences ; Carbohydrate Sulfotransferases ; Corneal Dystrophies, Hereditary - blood ; Corneal Dystrophies, Hereditary - enzymology ; Corneal Dystrophies, Hereditary - genetics ; Diseases of cornea, anterior segment and sclera ; DNA Mutational Analysis ; Humans ; India ; Keratan Sulfate - blood ; Medical sciences ; Mutation ; Open Reading Frames - genetics ; Ophthalmology ; Polymerase Chain Reaction ; Sulfotransferases - genetics</subject><ispartof>Archives of ophthalmology (1960), 2003-11, Vol.121 (11), p.1608-1612</ispartof><rights>2004 INIST-CNRS</rights><rights>Copyright American Medical Association Nov 2003</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a424t-6d19dfec72f400b79579b856af6ea698328d0b0d9513626dd1fb3cc753a202c43</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15295214$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14609920$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Warren, John F</creatorcontrib><creatorcontrib>Aldave, Anthony J</creatorcontrib><creatorcontrib>Srinivasan, M</creatorcontrib><creatorcontrib>Thonar, Eugene J</creatorcontrib><creatorcontrib>Kumar, Abha B</creatorcontrib><creatorcontrib>Cevallos, Vicky</creatorcontrib><creatorcontrib>Whitcher, John P</creatorcontrib><creatorcontrib>Margolis, Todd P</creatorcontrib><title>Novel Mutations in the CHST6 Gene Associated With Macular Corneal Dystrophy in Southern India</title><title>Archives of ophthalmology (1960)</title><addtitle>Arch Ophthalmol</addtitle><description>OBJECTIVE To further characterize the role of the carbohydrate sulfotransferase(CHST6) gene in macular corneal dystrophy (MCD) through identification of causative mutations in a cohort of affected patients from southern India. METHODS Genomic DNA was extracted from buccal epithelium of 75 patients (51 families) with MCD, 33 unaffected relatives, and 48 healthy volunteers. The coding region of the CHST6 gene was evaluated by means of polymerase chain reaction amplification and direct sequencing. Subtyping of MCD into types I and II was performed by measuring serum levels of antigenic keratan sulfate. RESULTS Seventy patients were classified as having type I MCD, and 5 patients as having type II MCD. Analysis of the CHST6 coding region in patients with type I MCD identified 11 homozygous missense mutations(Leu22Arg, His42Tyr, Arg50Cys, Arg50Leu, Ser53Leu, Arg97Pro, Cys102Tyr, Arg127Cys, Arg205Gln, His249Pro, and Glu274Lys), 2 compound heterozygous missense mutations(Arg93His and Ala206Thr), 5 homozygous deletion mutations (del CG707-708, del C890, del A1237, del1748-1770, and del ORF), and 2 homozygous replacement mutations(ACCTAC 1273 GGT, and GCG 1304 AT). One patient with type II MCD was heterozygous for the C890 deletion mutation, whereas 4 possessed no CHST6 coding region mutations. CONCLUSION A variety of previously unreported mutations in the coding region of the CHST6 gene are associated with type I MCD in a cohort of patients in southern India. CLINICAL RELEVANCE An improved understanding of the genetic basis of MCD allows for earlier, more accurate diagnosis of affected individuals, and may provide the foundation for the development of novel disease treatments.Arch Ophthalmol.2003;121:1608-1612
--></description><subject>Biological and medical sciences</subject><subject>Carbohydrate Sulfotransferases</subject><subject>Corneal Dystrophies, Hereditary - blood</subject><subject>Corneal Dystrophies, Hereditary - enzymology</subject><subject>Corneal Dystrophies, Hereditary - genetics</subject><subject>Diseases of cornea, anterior segment and sclera</subject><subject>DNA Mutational Analysis</subject><subject>Humans</subject><subject>India</subject><subject>Keratan Sulfate - blood</subject><subject>Medical sciences</subject><subject>Mutation</subject><subject>Open Reading Frames - genetics</subject><subject>Ophthalmology</subject><subject>Polymerase Chain Reaction</subject><subject>Sulfotransferases - genetics</subject><issn>0003-9950</issn><issn>2168-6165</issn><issn>1538-3601</issn><issn>2168-6173</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkF1rFDEUhoModq3-AEEkCHo3a04yySSXZattoR8XrXglw5kkw06ZnaxJprD_3iy7WhAOhJDnfXN4CPkAbAmMwVeMdh2267wEDksoo5h-QRYgha6EYvCSLBhjojJGshPyJqXHclXAzGtyArVixnC2IL9uw5Mf6c2cMQ9hSnSYaF57urq8f1D0wk-enqUU7IDZO_pzyGt6g3YeMdJViJPHkZ7vUo5lk90-ex_mEo8TvZrcgG_Jqx7H5N8dz1Py4_u3h9VldX13cbU6u66w5nWulAPjem8b3teMdY2Rjem0VNgrj8powbVjHXNGglBcOQd9J6xtpEDOuK3FKfly6N3G8Hv2KbebIVk_jjj5MKe2AVGbUl3AT_-Bj2GOU9mt5QKM1MLs2-oDZGNIKfq-3cZhg3HXAmv37tu_7tvivoUyxX2JfTx2z93Gu-fQUXYBPh8BTBbHPuJkh_TMSW4kh_3_7w8cbvDfaw1Say3-AAe6lXs</recordid><startdate>20031101</startdate><enddate>20031101</enddate><creator>Warren, John F</creator><creator>Aldave, Anthony J</creator><creator>Srinivasan, M</creator><creator>Thonar, Eugene J</creator><creator>Kumar, Abha B</creator><creator>Cevallos, Vicky</creator><creator>Whitcher, John P</creator><creator>Margolis, Todd P</creator><general>American Medical Association</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TK</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>7X8</scope></search><sort><creationdate>20031101</creationdate><title>Novel Mutations in the CHST6 Gene Associated With Macular Corneal Dystrophy in Southern India</title><author>Warren, John F ; Aldave, Anthony J ; Srinivasan, M ; Thonar, Eugene J ; Kumar, Abha B ; Cevallos, Vicky ; Whitcher, John P ; Margolis, Todd P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a424t-6d19dfec72f400b79579b856af6ea698328d0b0d9513626dd1fb3cc753a202c43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Biological and medical sciences</topic><topic>Carbohydrate Sulfotransferases</topic><topic>Corneal Dystrophies, Hereditary - blood</topic><topic>Corneal Dystrophies, Hereditary - enzymology</topic><topic>Corneal Dystrophies, Hereditary - genetics</topic><topic>Diseases of cornea, anterior segment and sclera</topic><topic>DNA Mutational Analysis</topic><topic>Humans</topic><topic>India</topic><topic>Keratan Sulfate - blood</topic><topic>Medical sciences</topic><topic>Mutation</topic><topic>Open Reading Frames - genetics</topic><topic>Ophthalmology</topic><topic>Polymerase Chain Reaction</topic><topic>Sulfotransferases - genetics</topic><toplevel>online_resources</toplevel><creatorcontrib>Warren, John F</creatorcontrib><creatorcontrib>Aldave, Anthony J</creatorcontrib><creatorcontrib>Srinivasan, M</creatorcontrib><creatorcontrib>Thonar, Eugene J</creatorcontrib><creatorcontrib>Kumar, Abha B</creatorcontrib><creatorcontrib>Cevallos, Vicky</creatorcontrib><creatorcontrib>Whitcher, John P</creatorcontrib><creatorcontrib>Margolis, Todd P</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of ophthalmology (1960)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Warren, John F</au><au>Aldave, Anthony J</au><au>Srinivasan, M</au><au>Thonar, Eugene J</au><au>Kumar, Abha B</au><au>Cevallos, Vicky</au><au>Whitcher, John P</au><au>Margolis, Todd P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Novel Mutations in the CHST6 Gene Associated With Macular Corneal Dystrophy in Southern India</atitle><jtitle>Archives of ophthalmology (1960)</jtitle><addtitle>Arch Ophthalmol</addtitle><date>2003-11-01</date><risdate>2003</risdate><volume>121</volume><issue>11</issue><spage>1608</spage><epage>1612</epage><pages>1608-1612</pages><issn>0003-9950</issn><issn>2168-6165</issn><eissn>1538-3601</eissn><eissn>2168-6173</eissn><abstract>OBJECTIVE To further characterize the role of the carbohydrate sulfotransferase(CHST6) gene in macular corneal dystrophy (MCD) through identification of causative mutations in a cohort of affected patients from southern India. METHODS Genomic DNA was extracted from buccal epithelium of 75 patients (51 families) with MCD, 33 unaffected relatives, and 48 healthy volunteers. The coding region of the CHST6 gene was evaluated by means of polymerase chain reaction amplification and direct sequencing. Subtyping of MCD into types I and II was performed by measuring serum levels of antigenic keratan sulfate. RESULTS Seventy patients were classified as having type I MCD, and 5 patients as having type II MCD. Analysis of the CHST6 coding region in patients with type I MCD identified 11 homozygous missense mutations(Leu22Arg, His42Tyr, Arg50Cys, Arg50Leu, Ser53Leu, Arg97Pro, Cys102Tyr, Arg127Cys, Arg205Gln, His249Pro, and Glu274Lys), 2 compound heterozygous missense mutations(Arg93His and Ala206Thr), 5 homozygous deletion mutations (del CG707-708, del C890, del A1237, del1748-1770, and del ORF), and 2 homozygous replacement mutations(ACCTAC 1273 GGT, and GCG 1304 AT). One patient with type II MCD was heterozygous for the C890 deletion mutation, whereas 4 possessed no CHST6 coding region mutations. CONCLUSION A variety of previously unreported mutations in the coding region of the CHST6 gene are associated with type I MCD in a cohort of patients in southern India. CLINICAL RELEVANCE An improved understanding of the genetic basis of MCD allows for earlier, more accurate diagnosis of affected individuals, and may provide the foundation for the development of novel disease treatments.Arch Ophthalmol.2003;121:1608-1612
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subjects | Biological and medical sciences Carbohydrate Sulfotransferases Corneal Dystrophies, Hereditary - blood Corneal Dystrophies, Hereditary - enzymology Corneal Dystrophies, Hereditary - genetics Diseases of cornea, anterior segment and sclera DNA Mutational Analysis Humans India Keratan Sulfate - blood Medical sciences Mutation Open Reading Frames - genetics Ophthalmology Polymerase Chain Reaction Sulfotransferases - genetics |
title | Novel Mutations in the CHST6 Gene Associated With Macular Corneal Dystrophy in Southern India |
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