Cloning and identification of a novel cDNA which encodes a putative protein with a DnaJ domain and a thioredoxin active motif, human macrothioredoxin
A 3345 bp cDNA was isolated from the fetal brain cDNA library by high throughput cDNA sequencing. The cDNA with an open reading fragment (ORF) of 2241 bp encodes a 747 amino acids putative protein with a DnaJ N-terminus domain and four thioredoxin active sets. So it is named human macrothioredoxin (...
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Veröffentlicht in: | Biochemical genetics 2003-08, Vol.41 (7-8), p.245-253 |
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creator | Gu, Shao-Hua Chen, Jin-Zhong Ying, Kang Wang, Shu Jin, Wei Qian, Ji Zhao, En-Peng Xie, Yi Mao, Yu-Min |
description | A 3345 bp cDNA was isolated from the fetal brain cDNA library by high throughput cDNA sequencing. The cDNA with an open reading fragment (ORF) of 2241 bp encodes a 747 amino acids putative protein with a DnaJ N-terminus domain and four thioredoxin active sets. So it is named human macrothioredoxin (hMTHr). We used Northern blot to detect a band with a length of about 5 kb, which was ubiquitously expressed in human adult tissues with different intensities. The expression pattern was verified by RT-PCR, revealing that the transcripts were ubiquitously expressed in fetal tissues and human tumor tissues also. The transcripts in fetal tissues were more numerous than in adult tissues. The transcripts were high in adult testis, adult pancreas, fetal thymus, and fetal kidney. We have found three splice isoforms with lengths of 3483, 3345, and 2982 bp in the sequencing analysis of the RT-PCR products. They encode three putative proteins with 793, 747, and 275 amino acids, respectively. The first two putative proteins contain a DnaJ domain and four thioredoxin domains. The third putative protein only contains an N-terminus DnaJ domain and one thioredoxin active set. Blast analysis against the NCBI database revealed that the gene spans a genome sequence of about 75 kb that contains at least 25 exons and is located in human chromosome 2q32.1. The organization of the functional motifs of hMTHr suggests that the protein might be a member of a molecular chaperone family. |
doi_str_mv | 10.1023/A:1025510502147 |
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The cDNA with an open reading fragment (ORF) of 2241 bp encodes a 747 amino acids putative protein with a DnaJ N-terminus domain and four thioredoxin active sets. So it is named human macrothioredoxin (hMTHr). We used Northern blot to detect a band with a length of about 5 kb, which was ubiquitously expressed in human adult tissues with different intensities. The expression pattern was verified by RT-PCR, revealing that the transcripts were ubiquitously expressed in fetal tissues and human tumor tissues also. The transcripts in fetal tissues were more numerous than in adult tissues. The transcripts were high in adult testis, adult pancreas, fetal thymus, and fetal kidney. We have found three splice isoforms with lengths of 3483, 3345, and 2982 bp in the sequencing analysis of the RT-PCR products. They encode three putative proteins with 793, 747, and 275 amino acids, respectively. The first two putative proteins contain a DnaJ domain and four thioredoxin domains. The third putative protein only contains an N-terminus DnaJ domain and one thioredoxin active set. Blast analysis against the NCBI database revealed that the gene spans a genome sequence of about 75 kb that contains at least 25 exons and is located in human chromosome 2q32.1. The organization of the functional motifs of hMTHr suggests that the protein might be a member of a molecular chaperone family.</description><identifier>ISSN: 0006-2928</identifier><identifier>EISSN: 1573-4927</identifier><identifier>DOI: 10.1023/A:1025510502147</identifier><identifier>PMID: 14587667</identifier><language>eng</language><publisher>United States: Springer Nature B.V</publisher><subject>Amino Acid Sequence ; Amino acids ; Bacteriology ; chromosome 2 ; Cloning ; Cloning, Molecular ; DNA, Complementary ; hMTHr gene ; HSP40 Heat-Shock Proteins ; Humans ; macrothioredoxin ; Molecular Chaperones ; Molecular Sequence Data ; Protein Isoforms - genetics ; Protein Structure, Tertiary ; Sequence Alignment ; Sequence Analysis, DNA ; Sequence Analysis, Protein ; Thioredoxins - genetics ; Thioredoxins - metabolism ; Tissues</subject><ispartof>Biochemical genetics, 2003-08, Vol.41 (7-8), p.245-253</ispartof><rights>Plenum Publishing Corporation 2003</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14587667$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gu, Shao-Hua</creatorcontrib><creatorcontrib>Chen, Jin-Zhong</creatorcontrib><creatorcontrib>Ying, Kang</creatorcontrib><creatorcontrib>Wang, Shu</creatorcontrib><creatorcontrib>Jin, Wei</creatorcontrib><creatorcontrib>Qian, Ji</creatorcontrib><creatorcontrib>Zhao, En-Peng</creatorcontrib><creatorcontrib>Xie, Yi</creatorcontrib><creatorcontrib>Mao, Yu-Min</creatorcontrib><title>Cloning and identification of a novel cDNA which encodes a putative protein with a DnaJ domain and a thioredoxin active motif, human macrothioredoxin</title><title>Biochemical genetics</title><addtitle>Biochem Genet</addtitle><description>A 3345 bp cDNA was isolated from the fetal brain cDNA library by high throughput cDNA sequencing. The cDNA with an open reading fragment (ORF) of 2241 bp encodes a 747 amino acids putative protein with a DnaJ N-terminus domain and four thioredoxin active sets. So it is named human macrothioredoxin (hMTHr). We used Northern blot to detect a band with a length of about 5 kb, which was ubiquitously expressed in human adult tissues with different intensities. The expression pattern was verified by RT-PCR, revealing that the transcripts were ubiquitously expressed in fetal tissues and human tumor tissues also. The transcripts in fetal tissues were more numerous than in adult tissues. The transcripts were high in adult testis, adult pancreas, fetal thymus, and fetal kidney. We have found three splice isoforms with lengths of 3483, 3345, and 2982 bp in the sequencing analysis of the RT-PCR products. They encode three putative proteins with 793, 747, and 275 amino acids, respectively. The first two putative proteins contain a DnaJ domain and four thioredoxin domains. The third putative protein only contains an N-terminus DnaJ domain and one thioredoxin active set. Blast analysis against the NCBI database revealed that the gene spans a genome sequence of about 75 kb that contains at least 25 exons and is located in human chromosome 2q32.1. The organization of the functional motifs of hMTHr suggests that the protein might be a member of a molecular chaperone family.</description><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Bacteriology</subject><subject>chromosome 2</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>DNA, Complementary</subject><subject>hMTHr gene</subject><subject>HSP40 Heat-Shock Proteins</subject><subject>Humans</subject><subject>macrothioredoxin</subject><subject>Molecular Chaperones</subject><subject>Molecular Sequence Data</subject><subject>Protein Isoforms - genetics</subject><subject>Protein Structure, Tertiary</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Analysis, Protein</subject><subject>Thioredoxins - genetics</subject><subject>Thioredoxins - metabolism</subject><subject>Tissues</subject><issn>0006-2928</issn><issn>1573-4927</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqFkUlvFDEQRq2IKBlCztyQxQFxoMH7wm00gSyK4ALnVrXbph1120MvSfgh-b94sgiJA5xK9fnVK5WM0EtK3lPC-If1x1KkpEQSRoXeQysqNa-EZfoZWhFCVMUsM4fo-TRdldYSIQ7QIRXSaKX0Ct1t-pxi-oEhtTi2Ps0xRAdzzAnngAGnfO177E6-rPFNF12HfXK59VN52i5zAa893o559jHhmzh3JT9JcIHbPECJdlrAcxfz6Nt8u0vc_cyQy6Z3uFsGSHgAVxR_oBdoP0A_-ePHeoS-f_70bXNWXX49Pd-sL6sts2auABoIQTfQBKttCzoEaVraBCMbKai0iismhDWOaG0KwJURjpnQKAAXAj9Cbx685YKfi5_meoiT830PyedlqjXljGth_gtSyxhTTBXw7b9BwouOULZzvv4LvcrLmMq9tZaGcKXuF796hJZm8G29HeMA46_66Qf5bwNXnrI</recordid><startdate>200308</startdate><enddate>200308</enddate><creator>Gu, Shao-Hua</creator><creator>Chen, Jin-Zhong</creator><creator>Ying, Kang</creator><creator>Wang, Shu</creator><creator>Jin, Wei</creator><creator>Qian, Ji</creator><creator>Zhao, En-Peng</creator><creator>Xie, Yi</creator><creator>Mao, Yu-Min</creator><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7SS</scope><scope>7TK</scope><scope>7U7</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7TM</scope><scope>7X8</scope></search><sort><creationdate>200308</creationdate><title>Cloning and identification of a novel cDNA which encodes a putative protein with a DnaJ domain and a thioredoxin active motif, human macrothioredoxin</title><author>Gu, Shao-Hua ; Chen, Jin-Zhong ; Ying, Kang ; Wang, Shu ; Jin, Wei ; Qian, Ji ; Zhao, En-Peng ; Xie, Yi ; Mao, Yu-Min</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p298t-aabaff7babf979da7ff58d1bf85b5415963624498c07789da3684c28fb6aacff3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Bacteriology</topic><topic>chromosome 2</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>DNA, Complementary</topic><topic>hMTHr gene</topic><topic>HSP40 Heat-Shock Proteins</topic><topic>Humans</topic><topic>macrothioredoxin</topic><topic>Molecular Chaperones</topic><topic>Molecular Sequence Data</topic><topic>Protein Isoforms - genetics</topic><topic>Protein Structure, Tertiary</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Analysis, Protein</topic><topic>Thioredoxins - genetics</topic><topic>Thioredoxins - metabolism</topic><topic>Tissues</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gu, Shao-Hua</creatorcontrib><creatorcontrib>Chen, Jin-Zhong</creatorcontrib><creatorcontrib>Ying, Kang</creatorcontrib><creatorcontrib>Wang, Shu</creatorcontrib><creatorcontrib>Jin, Wei</creatorcontrib><creatorcontrib>Qian, Ji</creatorcontrib><creatorcontrib>Zhao, En-Peng</creatorcontrib><creatorcontrib>Xie, Yi</creatorcontrib><creatorcontrib>Mao, Yu-Min</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemical genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gu, Shao-Hua</au><au>Chen, Jin-Zhong</au><au>Ying, Kang</au><au>Wang, Shu</au><au>Jin, Wei</au><au>Qian, Ji</au><au>Zhao, En-Peng</au><au>Xie, Yi</au><au>Mao, Yu-Min</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning and identification of a novel cDNA which encodes a putative protein with a DnaJ domain and a thioredoxin active motif, human macrothioredoxin</atitle><jtitle>Biochemical genetics</jtitle><addtitle>Biochem Genet</addtitle><date>2003-08</date><risdate>2003</risdate><volume>41</volume><issue>7-8</issue><spage>245</spage><epage>253</epage><pages>245-253</pages><issn>0006-2928</issn><eissn>1573-4927</eissn><abstract>A 3345 bp cDNA was isolated from the fetal brain cDNA library by high throughput cDNA sequencing. The cDNA with an open reading fragment (ORF) of 2241 bp encodes a 747 amino acids putative protein with a DnaJ N-terminus domain and four thioredoxin active sets. So it is named human macrothioredoxin (hMTHr). We used Northern blot to detect a band with a length of about 5 kb, which was ubiquitously expressed in human adult tissues with different intensities. The expression pattern was verified by RT-PCR, revealing that the transcripts were ubiquitously expressed in fetal tissues and human tumor tissues also. The transcripts in fetal tissues were more numerous than in adult tissues. The transcripts were high in adult testis, adult pancreas, fetal thymus, and fetal kidney. We have found three splice isoforms with lengths of 3483, 3345, and 2982 bp in the sequencing analysis of the RT-PCR products. They encode three putative proteins with 793, 747, and 275 amino acids, respectively. The first two putative proteins contain a DnaJ domain and four thioredoxin domains. The third putative protein only contains an N-terminus DnaJ domain and one thioredoxin active set. Blast analysis against the NCBI database revealed that the gene spans a genome sequence of about 75 kb that contains at least 25 exons and is located in human chromosome 2q32.1. The organization of the functional motifs of hMTHr suggests that the protein might be a member of a molecular chaperone family.</abstract><cop>United States</cop><pub>Springer Nature B.V</pub><pmid>14587667</pmid><doi>10.1023/A:1025510502147</doi><tpages>9</tpages></addata></record> |
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subjects | Amino Acid Sequence Amino acids Bacteriology chromosome 2 Cloning Cloning, Molecular DNA, Complementary hMTHr gene HSP40 Heat-Shock Proteins Humans macrothioredoxin Molecular Chaperones Molecular Sequence Data Protein Isoforms - genetics Protein Structure, Tertiary Sequence Alignment Sequence Analysis, DNA Sequence Analysis, Protein Thioredoxins - genetics Thioredoxins - metabolism Tissues |
title | Cloning and identification of a novel cDNA which encodes a putative protein with a DnaJ domain and a thioredoxin active motif, human macrothioredoxin |
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