Characterization of the Arabidopsis Formin-Like Protein AFH1 and Its Interacting Protein
A partial cDNA encoding an Arabidopsis thaliana FH (Formin Homology) protein (AFH1) was used as a probe to clone a full length AFH1 cDNA. The deduced protein encoded by the cDNA contains a FH1 domain rich in proline residues and a C-terminal FH2 domain which is highly conserved amongst FH proteins....
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Veröffentlicht in: | Plant and cell physiology 2000-05, Vol.41 (5), p.617-626 |
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description | A partial cDNA encoding an Arabidopsis thaliana FH (Formin Homology) protein (AFH1) was used as a probe to clone a full length AFH1 cDNA. The deduced protein encoded by the cDNA contains a FH1 domain rich in proline residues and a C-terminal FH2 domain which is highly conserved amongst FH proteins. In contrast to FH proteins of other organisms, the predicted AFH1 protein also contains a putative signal peptide and a transmembrane domain suggesting its association with membrane. Cell fractionation by differential centrifugation demonstrated the presence of AFH1 in the Triton X-100 insoluble microsomal fraction. An Arabidopsis cDNA library was screened to identify proteins that interact with the C-terminal region of AFH1 using yeast two-hybrid assays, and one of the isolated cDNAs encoded a novel protein, FIP2. Experiments using recombinant proteins expressed in E. coli demonstrated that FIP2 interacted directly with AFH1. The amino acid sequence of FIP2 has partial homology to bacterial putative membrane proteins and animal A-type K+ ATPases. AFH1 may form a membrane anchored complex with FIP2, which might be involved in the organization of the actin cytoskeleton. |
doi_str_mv | 10.1093/pcp/41.5.617 |
format | Article |
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The deduced protein encoded by the cDNA contains a FH1 domain rich in proline residues and a C-terminal FH2 domain which is highly conserved amongst FH proteins. In contrast to FH proteins of other organisms, the predicted AFH1 protein also contains a putative signal peptide and a transmembrane domain suggesting its association with membrane. Cell fractionation by differential centrifugation demonstrated the presence of AFH1 in the Triton X-100 insoluble microsomal fraction. An Arabidopsis cDNA library was screened to identify proteins that interact with the C-terminal region of AFH1 using yeast two-hybrid assays, and one of the isolated cDNAs encoded a novel protein, FIP2. Experiments using recombinant proteins expressed in E. coli demonstrated that FIP2 interacted directly with AFH1. The amino acid sequence of FIP2 has partial homology to bacterial putative membrane proteins and animal A-type K+ ATPases. AFH1 may form a membrane anchored complex with FIP2, which might be involved in the organization of the actin cytoskeleton.</description><identifier>ISSN: 0032-0781</identifier><identifier>EISSN: 1471-9053</identifier><identifier>DOI: 10.1093/pcp/41.5.617</identifier><identifier>PMID: 10929945</identifier><language>eng</language><publisher>Japan: Plant and Cell Physiology</publisher><subject>Actin ; Adenosine Triphosphatases - chemistry ; Amino Acid Sequence ; Animals ; Arabidopsis - genetics ; Arabidopsis Proteins ; Carrier Proteins - metabolism ; Cation Transport Proteins ; Cloning, Molecular ; Conserved Sequence ; Cytoskeleton ; DNA, Complementary ; Escherichia coli ; FH protein ; Gene Library ; Humans ; Membrane protein ; Membrane Proteins - chemistry ; Membrane Proteins - genetics ; Membrane Proteins - metabolism ; Mice ; Microsomes - metabolism ; Molecular Sequence Data ; Plant Proteins - chemistry ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Protein Sorting Signals - genetics ; Recombinant Proteins - chemistry ; Recombinant Proteins - metabolism ; Sequence Alignment ; Sequence Homology, Amino Acid</subject><ispartof>Plant and cell physiology, 2000-05, Vol.41 (5), p.617-626</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c429t-a436e425cb653f8594b98124e619b2d4f11fb18eca955af11f482742d88db6c93</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10929945$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Banno, Hiroharu</creatorcontrib><creatorcontrib>Chua, Nam-Hai</creatorcontrib><title>Characterization of the Arabidopsis Formin-Like Protein AFH1 and Its Interacting Protein</title><title>Plant and cell physiology</title><addtitle>Plant Cell Physiol</addtitle><description>A partial cDNA encoding an Arabidopsis thaliana FH (Formin Homology) protein (AFH1) was used as a probe to clone a full length AFH1 cDNA. The deduced protein encoded by the cDNA contains a FH1 domain rich in proline residues and a C-terminal FH2 domain which is highly conserved amongst FH proteins. In contrast to FH proteins of other organisms, the predicted AFH1 protein also contains a putative signal peptide and a transmembrane domain suggesting its association with membrane. Cell fractionation by differential centrifugation demonstrated the presence of AFH1 in the Triton X-100 insoluble microsomal fraction. An Arabidopsis cDNA library was screened to identify proteins that interact with the C-terminal region of AFH1 using yeast two-hybrid assays, and one of the isolated cDNAs encoded a novel protein, FIP2. Experiments using recombinant proteins expressed in E. coli demonstrated that FIP2 interacted directly with AFH1. The amino acid sequence of FIP2 has partial homology to bacterial putative membrane proteins and animal A-type K+ ATPases. AFH1 may form a membrane anchored complex with FIP2, which might be involved in the organization of the actin cytoskeleton.</description><subject>Actin</subject><subject>Adenosine Triphosphatases - chemistry</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis Proteins</subject><subject>Carrier Proteins - metabolism</subject><subject>Cation Transport Proteins</subject><subject>Cloning, Molecular</subject><subject>Conserved Sequence</subject><subject>Cytoskeleton</subject><subject>DNA, Complementary</subject><subject>Escherichia coli</subject><subject>FH protein</subject><subject>Gene Library</subject><subject>Humans</subject><subject>Membrane protein</subject><subject>Membrane Proteins - chemistry</subject><subject>Membrane Proteins - genetics</subject><subject>Membrane Proteins - metabolism</subject><subject>Mice</subject><subject>Microsomes - metabolism</subject><subject>Molecular Sequence Data</subject><subject>Plant Proteins - chemistry</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Protein Sorting Signals - genetics</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Alignment</subject><subject>Sequence Homology, Amino Acid</subject><issn>0032-0781</issn><issn>1471-9053</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNkE1PwjAYgBujEURvnk1Pnhz0c12PhIiQzI9ETIiXpts6qcA225Gov96SofHUt3mf9zk8AFxiNMRI0lGTNyOGh3wYY3EE-pgJHEnE6THoI0RJhESCe-DM-3eEwkzRKeiFQyIl432wnKy003lrnP3Wra0rWJewXRk4djqzRd146-G0dltbRaldG_jk6tbYCo6nMwx1VcB56-G8CoJgsdXbL3AOTkq98ebi8A7Ay_R2MZlF6ePdfDJOo5wR2Uaa0dgwwvMs5rRMuGSZTDBhJsYyIwUrMS4znJhcS871_scSIhgpkqTI4lzSAbjuvI2rP3bGt2prfW42G12ZeueVwIRzIWkAbzowd7X3zpSqcXar3ZfCSO1LqlBSMay4CiUDfnXw7rKtKf7BXboARB1gfWs-__barVUsqOBqtnxV5P5BPKdkoWL6A55EfYU</recordid><startdate>20000501</startdate><enddate>20000501</enddate><creator>Banno, Hiroharu</creator><creator>Chua, Nam-Hai</creator><general>Plant and Cell Physiology</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20000501</creationdate><title>Characterization of the Arabidopsis Formin-Like Protein AFH1 and Its Interacting Protein</title><author>Banno, Hiroharu ; Chua, Nam-Hai</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c429t-a436e425cb653f8594b98124e619b2d4f11fb18eca955af11f482742d88db6c93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Actin</topic><topic>Adenosine Triphosphatases - chemistry</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis Proteins</topic><topic>Carrier Proteins - metabolism</topic><topic>Cation Transport Proteins</topic><topic>Cloning, Molecular</topic><topic>Conserved Sequence</topic><topic>Cytoskeleton</topic><topic>DNA, Complementary</topic><topic>Escherichia coli</topic><topic>FH protein</topic><topic>Gene Library</topic><topic>Humans</topic><topic>Membrane protein</topic><topic>Membrane Proteins - chemistry</topic><topic>Membrane Proteins - genetics</topic><topic>Membrane Proteins - metabolism</topic><topic>Mice</topic><topic>Microsomes - metabolism</topic><topic>Molecular Sequence Data</topic><topic>Plant Proteins - chemistry</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Protein Sorting Signals - genetics</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Alignment</topic><topic>Sequence Homology, Amino Acid</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Banno, Hiroharu</creatorcontrib><creatorcontrib>Chua, Nam-Hai</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Plant and cell physiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Banno, Hiroharu</au><au>Chua, Nam-Hai</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of the Arabidopsis Formin-Like Protein AFH1 and Its Interacting Protein</atitle><jtitle>Plant and cell physiology</jtitle><addtitle>Plant Cell Physiol</addtitle><date>2000-05-01</date><risdate>2000</risdate><volume>41</volume><issue>5</issue><spage>617</spage><epage>626</epage><pages>617-626</pages><issn>0032-0781</issn><eissn>1471-9053</eissn><abstract>A partial cDNA encoding an Arabidopsis thaliana FH (Formin Homology) protein (AFH1) was used as a probe to clone a full length AFH1 cDNA. The deduced protein encoded by the cDNA contains a FH1 domain rich in proline residues and a C-terminal FH2 domain which is highly conserved amongst FH proteins. In contrast to FH proteins of other organisms, the predicted AFH1 protein also contains a putative signal peptide and a transmembrane domain suggesting its association with membrane. Cell fractionation by differential centrifugation demonstrated the presence of AFH1 in the Triton X-100 insoluble microsomal fraction. An Arabidopsis cDNA library was screened to identify proteins that interact with the C-terminal region of AFH1 using yeast two-hybrid assays, and one of the isolated cDNAs encoded a novel protein, FIP2. Experiments using recombinant proteins expressed in E. coli demonstrated that FIP2 interacted directly with AFH1. The amino acid sequence of FIP2 has partial homology to bacterial putative membrane proteins and animal A-type K+ ATPases. AFH1 may form a membrane anchored complex with FIP2, which might be involved in the organization of the actin cytoskeleton.</abstract><cop>Japan</cop><pub>Plant and Cell Physiology</pub><pmid>10929945</pmid><doi>10.1093/pcp/41.5.617</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Oxford University Press Journals All Titles (1996-Current); Freely Accessible Japanese Titles; EZB-FREE-00999 freely available EZB journals |
subjects | Actin Adenosine Triphosphatases - chemistry Amino Acid Sequence Animals Arabidopsis - genetics Arabidopsis Proteins Carrier Proteins - metabolism Cation Transport Proteins Cloning, Molecular Conserved Sequence Cytoskeleton DNA, Complementary Escherichia coli FH protein Gene Library Humans Membrane protein Membrane Proteins - chemistry Membrane Proteins - genetics Membrane Proteins - metabolism Mice Microsomes - metabolism Molecular Sequence Data Plant Proteins - chemistry Plant Proteins - genetics Plant Proteins - metabolism Protein Sorting Signals - genetics Recombinant Proteins - chemistry Recombinant Proteins - metabolism Sequence Alignment Sequence Homology, Amino Acid |
title | Characterization of the Arabidopsis Formin-Like Protein AFH1 and Its Interacting Protein |
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