ARPP-16 mRNA is up-regulated in the longissimus muscle of pigs possessing an elevated growth rate
Selection for increased growth rate in farm and laboratory animals has been used to develop lines with increased body and muscle weights. However, very little is known about the underlying molecular pathways and how their constitutive genes influence this process. In this study, the differential dis...
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description | Selection for increased growth rate in farm and laboratory animals has been used to develop lines with increased body and muscle weights. However, very little is known about the underlying molecular pathways and how their constitutive genes influence this process. In this study, the differential display-reverse transcription PCR (DDRT-PCR) method was employed to identify longissimus muscle genes that are differentially expressed between a line of pigs selected for increased 200-d weight and a randomly selected control line. A 590-bp DDRT-PCR cDNA product was identified and isolated based on its greater abundance in the longissimus muscle of the select line relative to the control line animals. This DDRT-PCR product has 89% identity to the end of the 3'-untranslated region of the bovine 16-kDa cAMP-regulated phosphoprotein (ARPP-16) cDNA sequence. Reverse transcription PCR (RT-PCR) amplification of the porcine homologue of ARPP-16 and subsequent sequencing established that the DDRT-PCR product corresponds to the 3'-end of the porcine ARPP-16 transcript. Semiquantitative RT-PCR verified that ARPP-16 is up-regulated in the select line and determined that the relative expression level of ARPP16 mRNA is approximately fourfold higher (P < .01) in the select than in the control animals. The deduced amino acid sequence of ARPP-16 is highly homologous to the deduced amino acid sequences of bovine, human, and rat ARPP-16, and RT-PCR with ARPP-16-specific PCR primers indicated that this gene is expressed in many different porcine tissues. The porcine homologue of the 19-kDa cAMP-regulated phosphoprotein (ARPP-19) was also amplified by RT-PCR, cloned, and sequenced. The deduced amino acid sequence of ARPP19 differs from ARPP-16 only by the addition of 16 N-terminal amino acids. In all tissues studied, ARPP-19 mRNA was detected by RT-PCR amplification; however, the relative expression level of ARPP-19 mRNA was not differentially expressed between the select and control line animals (P > .05). The fourfold relative increase in ARPP-16 mRNA expression in the select line animals indicates that this gene may play an important role in the molecular pathway(s) that regulate postnatal skeletal muscle growth in the pig. |
doi_str_mv | 10.2527/2000.7861475x |
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A ; Kuhlers, D. L ; Jungst, S. B ; Louis, C. F</creator><creatorcontrib>Janzen, M. A ; Kuhlers, D. L ; Jungst, S. B ; Louis, C. F</creatorcontrib><description>Selection for increased growth rate in farm and laboratory animals has been used to develop lines with increased body and muscle weights. However, very little is known about the underlying molecular pathways and how their constitutive genes influence this process. In this study, the differential display-reverse transcription PCR (DDRT-PCR) method was employed to identify longissimus muscle genes that are differentially expressed between a line of pigs selected for increased 200-d weight and a randomly selected control line. A 590-bp DDRT-PCR cDNA product was identified and isolated based on its greater abundance in the longissimus muscle of the select line relative to the control line animals. This DDRT-PCR product has 89% identity to the end of the 3'-untranslated region of the bovine 16-kDa cAMP-regulated phosphoprotein (ARPP-16) cDNA sequence. Reverse transcription PCR (RT-PCR) amplification of the porcine homologue of ARPP-16 and subsequent sequencing established that the DDRT-PCR product corresponds to the 3'-end of the porcine ARPP-16 transcript. Semiquantitative RT-PCR verified that ARPP-16 is up-regulated in the select line and determined that the relative expression level of ARPP16 mRNA is approximately fourfold higher (P < .01) in the select than in the control animals. The deduced amino acid sequence of ARPP-16 is highly homologous to the deduced amino acid sequences of bovine, human, and rat ARPP-16, and RT-PCR with ARPP-16-specific PCR primers indicated that this gene is expressed in many different porcine tissues. The porcine homologue of the 19-kDa cAMP-regulated phosphoprotein (ARPP-19) was also amplified by RT-PCR, cloned, and sequenced. The deduced amino acid sequence of ARPP19 differs from ARPP-16 only by the addition of 16 N-terminal amino acids. In all tissues studied, ARPP-19 mRNA was detected by RT-PCR amplification; however, the relative expression level of ARPP-19 mRNA was not differentially expressed between the select and control line animals (P > .05). The fourfold relative increase in ARPP-16 mRNA expression in the select line animals indicates that this gene may play an important role in the molecular pathway(s) that regulate postnatal skeletal muscle growth in the pig.</description><identifier>ISSN: 0021-8812</identifier><identifier>EISSN: 1525-3163</identifier><identifier>EISSN: 0021-8812</identifier><identifier>DOI: 10.2527/2000.7861475x</identifier><identifier>PMID: 10875629</identifier><language>eng</language><publisher>Savoy, IL: Am Soc Animal Sci</publisher><subject>Amino Acid Sequence ; Animal productions ; Animals ; Base Sequence ; Biological and medical sciences ; Cattle ; Cloning, Molecular ; Fundamental and applied biological sciences. Psychology ; Hogs ; Humans ; Molecular Sequence Data ; Muscle Development ; Muscle, Skeletal - growth & development ; Muscular system ; Phosphoproteins - biosynthesis ; Phosphoproteins - genetics ; Physical growth ; Polymerase Chain Reaction - veterinary ; Rats ; Ribonucleic acid ; RNA ; RNA, Messenger - biosynthesis ; Swine - growth & development ; Terrestrial animal productions ; Up-Regulation ; Vertebrates</subject><ispartof>Journal of animal science, 2000-06, Vol.78 (6), p.1475-1484</ispartof><rights>2000 INIST-CNRS</rights><rights>Copyright American Society of Animal Science Jun 2000</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c376t-cf41838c7c826988e5d963c1b1bc5e962583d1476bd1ad4840d5b03187c63a1f3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=1449402$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10875629$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Janzen, M. A</creatorcontrib><creatorcontrib>Kuhlers, D. L</creatorcontrib><creatorcontrib>Jungst, S. B</creatorcontrib><creatorcontrib>Louis, C. F</creatorcontrib><title>ARPP-16 mRNA is up-regulated in the longissimus muscle of pigs possessing an elevated growth rate</title><title>Journal of animal science</title><addtitle>J Anim Sci</addtitle><description>Selection for increased growth rate in farm and laboratory animals has been used to develop lines with increased body and muscle weights. However, very little is known about the underlying molecular pathways and how their constitutive genes influence this process. In this study, the differential display-reverse transcription PCR (DDRT-PCR) method was employed to identify longissimus muscle genes that are differentially expressed between a line of pigs selected for increased 200-d weight and a randomly selected control line. A 590-bp DDRT-PCR cDNA product was identified and isolated based on its greater abundance in the longissimus muscle of the select line relative to the control line animals. This DDRT-PCR product has 89% identity to the end of the 3'-untranslated region of the bovine 16-kDa cAMP-regulated phosphoprotein (ARPP-16) cDNA sequence. Reverse transcription PCR (RT-PCR) amplification of the porcine homologue of ARPP-16 and subsequent sequencing established that the DDRT-PCR product corresponds to the 3'-end of the porcine ARPP-16 transcript. Semiquantitative RT-PCR verified that ARPP-16 is up-regulated in the select line and determined that the relative expression level of ARPP16 mRNA is approximately fourfold higher (P < .01) in the select than in the control animals. The deduced amino acid sequence of ARPP-16 is highly homologous to the deduced amino acid sequences of bovine, human, and rat ARPP-16, and RT-PCR with ARPP-16-specific PCR primers indicated that this gene is expressed in many different porcine tissues. The porcine homologue of the 19-kDa cAMP-regulated phosphoprotein (ARPP-19) was also amplified by RT-PCR, cloned, and sequenced. The deduced amino acid sequence of ARPP19 differs from ARPP-16 only by the addition of 16 N-terminal amino acids. In all tissues studied, ARPP-19 mRNA was detected by RT-PCR amplification; however, the relative expression level of ARPP-19 mRNA was not differentially expressed between the select and control line animals (P > .05). The fourfold relative increase in ARPP-16 mRNA expression in the select line animals indicates that this gene may play an important role in the molecular pathway(s) that regulate postnatal skeletal muscle growth in the pig.</description><subject>Amino Acid Sequence</subject><subject>Animal productions</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Cattle</subject><subject>Cloning, Molecular</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hogs</subject><subject>Humans</subject><subject>Molecular Sequence Data</subject><subject>Muscle Development</subject><subject>Muscle, Skeletal - growth & development</subject><subject>Muscular system</subject><subject>Phosphoproteins - biosynthesis</subject><subject>Phosphoproteins - genetics</subject><subject>Physical growth</subject><subject>Polymerase Chain Reaction - veterinary</subject><subject>Rats</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA, Messenger - biosynthesis</subject><subject>Swine - growth & development</subject><subject>Terrestrial animal productions</subject><subject>Up-Regulation</subject><subject>Vertebrates</subject><issn>0021-8812</issn><issn>1525-3163</issn><issn>0021-8812</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNpdkM1r3DAQxUVIabZpj7kGEUJvTjWS9eHjEpK2ENoQ2rOQZdmrRf6IZCfpf19td0tKD2IQ85s38x5CZ0CuKKfyEyWEXEkloJT85QitgFNeMBDsGK0IoVAoBfQEvUtpSwhQXvG36ASIklzQaoXM-uH-vgCB-4dva-wTXqYium4JZnYN9gOeNw6Hceh8Sr5fEs7PBofHFk--S3gaU3K5NXTYDNgF9_RnsIvj87zBMX_eozetCcl9ONRT9PP25sf1l-Lu--ev1-u7wjIp5sK2JSimrLSKikopx5tKMAs11Ja7SlCuWJNNiroB05SqJA2vCQMlrWAGWnaKPu51pzg-Li7NuvfJuhDM4MYlaQkUhOJlBi_-A7fjEod8m6aggHEiWYaKPWRjdhhdq6foexN_aSB6F7zeBa__Bp_584PoUveu-YfeJ52BywNgkjWhjWawPr1yZVmVhL662Phu8-yj06k3IWRV0FuTpNJC7zay34Lllac</recordid><startdate>20000601</startdate><enddate>20000601</enddate><creator>Janzen, M. 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A ; Kuhlers, D. L ; Jungst, S. B ; Louis, C. F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c376t-cf41838c7c826988e5d963c1b1bc5e962583d1476bd1ad4840d5b03187c63a1f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Amino Acid Sequence</topic><topic>Animal productions</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Cattle</topic><topic>Cloning, Molecular</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hogs</topic><topic>Humans</topic><topic>Molecular Sequence Data</topic><topic>Muscle Development</topic><topic>Muscle, Skeletal - growth & development</topic><topic>Muscular system</topic><topic>Phosphoproteins - biosynthesis</topic><topic>Phosphoproteins - genetics</topic><topic>Physical growth</topic><topic>Polymerase Chain Reaction - veterinary</topic><topic>Rats</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>RNA, Messenger - biosynthesis</topic><topic>Swine - growth & development</topic><topic>Terrestrial animal productions</topic><topic>Up-Regulation</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Janzen, M. A</creatorcontrib><creatorcontrib>Kuhlers, D. L</creatorcontrib><creatorcontrib>Jungst, S. B</creatorcontrib><creatorcontrib>Louis, C. 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A</au><au>Kuhlers, D. L</au><au>Jungst, S. B</au><au>Louis, C. F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>ARPP-16 mRNA is up-regulated in the longissimus muscle of pigs possessing an elevated growth rate</atitle><jtitle>Journal of animal science</jtitle><addtitle>J Anim Sci</addtitle><date>2000-06-01</date><risdate>2000</risdate><volume>78</volume><issue>6</issue><spage>1475</spage><epage>1484</epage><pages>1475-1484</pages><issn>0021-8812</issn><eissn>1525-3163</eissn><eissn>0021-8812</eissn><abstract>Selection for increased growth rate in farm and laboratory animals has been used to develop lines with increased body and muscle weights. However, very little is known about the underlying molecular pathways and how their constitutive genes influence this process. In this study, the differential display-reverse transcription PCR (DDRT-PCR) method was employed to identify longissimus muscle genes that are differentially expressed between a line of pigs selected for increased 200-d weight and a randomly selected control line. A 590-bp DDRT-PCR cDNA product was identified and isolated based on its greater abundance in the longissimus muscle of the select line relative to the control line animals. This DDRT-PCR product has 89% identity to the end of the 3'-untranslated region of the bovine 16-kDa cAMP-regulated phosphoprotein (ARPP-16) cDNA sequence. Reverse transcription PCR (RT-PCR) amplification of the porcine homologue of ARPP-16 and subsequent sequencing established that the DDRT-PCR product corresponds to the 3'-end of the porcine ARPP-16 transcript. Semiquantitative RT-PCR verified that ARPP-16 is up-regulated in the select line and determined that the relative expression level of ARPP16 mRNA is approximately fourfold higher (P < .01) in the select than in the control animals. The deduced amino acid sequence of ARPP-16 is highly homologous to the deduced amino acid sequences of bovine, human, and rat ARPP-16, and RT-PCR with ARPP-16-specific PCR primers indicated that this gene is expressed in many different porcine tissues. The porcine homologue of the 19-kDa cAMP-regulated phosphoprotein (ARPP-19) was also amplified by RT-PCR, cloned, and sequenced. The deduced amino acid sequence of ARPP19 differs from ARPP-16 only by the addition of 16 N-terminal amino acids. In all tissues studied, ARPP-19 mRNA was detected by RT-PCR amplification; however, the relative expression level of ARPP-19 mRNA was not differentially expressed between the select and control line animals (P > .05). The fourfold relative increase in ARPP-16 mRNA expression in the select line animals indicates that this gene may play an important role in the molecular pathway(s) that regulate postnatal skeletal muscle growth in the pig.</abstract><cop>Savoy, IL</cop><pub>Am Soc Animal Sci</pub><pmid>10875629</pmid><doi>10.2527/2000.7861475x</doi><tpages>10</tpages></addata></record> |
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subjects | Amino Acid Sequence Animal productions Animals Base Sequence Biological and medical sciences Cattle Cloning, Molecular Fundamental and applied biological sciences. Psychology Hogs Humans Molecular Sequence Data Muscle Development Muscle, Skeletal - growth & development Muscular system Phosphoproteins - biosynthesis Phosphoproteins - genetics Physical growth Polymerase Chain Reaction - veterinary Rats Ribonucleic acid RNA RNA, Messenger - biosynthesis Swine - growth & development Terrestrial animal productions Up-Regulation Vertebrates |
title | ARPP-16 mRNA is up-regulated in the longissimus muscle of pigs possessing an elevated growth rate |
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