Crystal structures of Escherichia coli phytase and its complex with phytate

Phytases catalyze the hydrolysis of phytate and are able to improve the nutritional quality of phytate-rich diets. Escherichia coli phytase, a member of the histidine acid phosphatase family has the highest specific activity of all phytases characterized. The crystal structure of E. coli phytase has...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Nature Structural Biology 2000-02, Vol.7 (2), p.108-113
Hauptverfasser: Jia, Zongchao, Lim, Daniel, Golovan, Serguei, Forsberg, Cecil W
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 113
container_issue 2
container_start_page 108
container_title Nature Structural Biology
container_volume 7
creator Jia, Zongchao
Lim, Daniel
Golovan, Serguei
Forsberg, Cecil W
description Phytases catalyze the hydrolysis of phytate and are able to improve the nutritional quality of phytate-rich diets. Escherichia coli phytase, a member of the histidine acid phosphatase family has the highest specific activity of all phytases characterized. The crystal structure of E. coli phytase has been determined by a two-wavelength anomalous diffraction method using the exceptionally strong anomalous scattering of tungsten. Despite a lack of sequence similarity, the structure closely resembles the overall fold of other histidine acid phosphatases. The structure of E. coli phytase in complex with phytate, the preferred substrate, reveals the binding mode and substrate recognition. The binding is also accompanied by conformational changes which suggest that substrate binding enhances catalysis by increasing the acidity of the general acid.
doi_str_mv 10.1038/72371
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_70875265</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>70875265</sourcerecordid><originalsourceid>FETCH-LOGICAL-c358t-1e7b45f10a56e4364135bfa0021fa05a4462f3abaf1a372c60d9451ab047f99f3</originalsourceid><addsrcrecordid>eNqF0UtLw0AQB_BFFFtrv4JED96iM_tMjlLqAwteFLyFTboxKXm5u0H77U1tteDFyy7s_PgvM0PIFOEKgUXXijKFB2RMGcOQSfF6SMYIioYRk9GInDi3AkDOIT4mIwQphEQck8eZXTuvq8B522e-t8YFbR7MXVYYW2ZFqYOsrcqgK9ZeOxPoZhmU3g2PdVeZz-Cj9MW26M0pOcp15cx0d0_Iy-38eXYfLp7uHmY3izBjIvIhGpVykSNoIQ1nkiMTaa4BKA6n0JxLmjOd6hw1UzSTsIy5QJ0CV3kc52xCLre5nW3fe-N8UpcuM1WlG9P2LlEQKUGl-BeiGihwOcCLP3DV9rYZmkgojWgUMxYP6GyH-rQ2y6SzZa3tOvkZ5v47N5SaN2P3KQjJZkvJ95YGeL6Fjd5M_DepcSlQ2NCIfQFKt4rZ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>228289339</pqid></control><display><type>article</type><title>Crystal structures of Escherichia coli phytase and its complex with phytate</title><source>MEDLINE</source><source>Nature</source><source>Alma/SFX Local Collection</source><creator>Jia, Zongchao ; Lim, Daniel ; Golovan, Serguei ; Forsberg, Cecil W</creator><creatorcontrib>Jia, Zongchao ; Lim, Daniel ; Golovan, Serguei ; Forsberg, Cecil W</creatorcontrib><description>Phytases catalyze the hydrolysis of phytate and are able to improve the nutritional quality of phytate-rich diets. Escherichia coli phytase, a member of the histidine acid phosphatase family has the highest specific activity of all phytases characterized. The crystal structure of E. coli phytase has been determined by a two-wavelength anomalous diffraction method using the exceptionally strong anomalous scattering of tungsten. Despite a lack of sequence similarity, the structure closely resembles the overall fold of other histidine acid phosphatases. The structure of E. coli phytase in complex with phytate, the preferred substrate, reveals the binding mode and substrate recognition. The binding is also accompanied by conformational changes which suggest that substrate binding enhances catalysis by increasing the acidity of the general acid.</description><identifier>ISSN: 1072-8368</identifier><identifier>ISSN: 1545-9993</identifier><identifier>EISSN: 2331-365X</identifier><identifier>EISSN: 1545-9985</identifier><identifier>DOI: 10.1038/72371</identifier><identifier>PMID: 10655611</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>6-Phytase - chemistry ; 6-Phytase - genetics ; 6-Phytase - metabolism ; Acidity ; Amino Acid Motifs ; Bacterial Proteins - chemistry ; Bacterial Proteins - metabolism ; Binding Sites ; Biochemistry ; Biological Microscopy ; Biomedical and Life Sciences ; Catalysis ; Crystallography, X-Ray ; E coli ; Escherichia coli ; Escherichia coli - enzymology ; letter ; Life Sciences ; Membrane Biology ; Models, Molecular ; Mutation ; Nutritive value ; phytic acid ; Phytic Acid - chemistry ; Phytic Acid - metabolism ; Protein Conformation ; Protein Structure ; Tungsten</subject><ispartof>Nature Structural Biology, 2000-02, Vol.7 (2), p.108-113</ispartof><rights>Nature America Inc. 2000</rights><rights>Copyright Nature Publishing Group Feb 2000</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c358t-1e7b45f10a56e4364135bfa0021fa05a4462f3abaf1a372c60d9451ab047f99f3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,2727,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10655611$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jia, Zongchao</creatorcontrib><creatorcontrib>Lim, Daniel</creatorcontrib><creatorcontrib>Golovan, Serguei</creatorcontrib><creatorcontrib>Forsberg, Cecil W</creatorcontrib><title>Crystal structures of Escherichia coli phytase and its complex with phytate</title><title>Nature Structural Biology</title><addtitle>Nat Struct Mol Biol</addtitle><addtitle>Nat Struct Biol</addtitle><description>Phytases catalyze the hydrolysis of phytate and are able to improve the nutritional quality of phytate-rich diets. Escherichia coli phytase, a member of the histidine acid phosphatase family has the highest specific activity of all phytases characterized. The crystal structure of E. coli phytase has been determined by a two-wavelength anomalous diffraction method using the exceptionally strong anomalous scattering of tungsten. Despite a lack of sequence similarity, the structure closely resembles the overall fold of other histidine acid phosphatases. The structure of E. coli phytase in complex with phytate, the preferred substrate, reveals the binding mode and substrate recognition. The binding is also accompanied by conformational changes which suggest that substrate binding enhances catalysis by increasing the acidity of the general acid.</description><subject>6-Phytase - chemistry</subject><subject>6-Phytase - genetics</subject><subject>6-Phytase - metabolism</subject><subject>Acidity</subject><subject>Amino Acid Motifs</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - metabolism</subject><subject>Binding Sites</subject><subject>Biochemistry</subject><subject>Biological Microscopy</subject><subject>Biomedical and Life Sciences</subject><subject>Catalysis</subject><subject>Crystallography, X-Ray</subject><subject>E coli</subject><subject>Escherichia coli</subject><subject>Escherichia coli - enzymology</subject><subject>letter</subject><subject>Life Sciences</subject><subject>Membrane Biology</subject><subject>Models, Molecular</subject><subject>Mutation</subject><subject>Nutritive value</subject><subject>phytic acid</subject><subject>Phytic Acid - chemistry</subject><subject>Phytic Acid - metabolism</subject><subject>Protein Conformation</subject><subject>Protein Structure</subject><subject>Tungsten</subject><issn>1072-8368</issn><issn>1545-9993</issn><issn>2331-365X</issn><issn>1545-9985</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqF0UtLw0AQB_BFFFtrv4JED96iM_tMjlLqAwteFLyFTboxKXm5u0H77U1tteDFyy7s_PgvM0PIFOEKgUXXijKFB2RMGcOQSfF6SMYIioYRk9GInDi3AkDOIT4mIwQphEQck8eZXTuvq8B522e-t8YFbR7MXVYYW2ZFqYOsrcqgK9ZeOxPoZhmU3g2PdVeZz-Cj9MW26M0pOcp15cx0d0_Iy-38eXYfLp7uHmY3izBjIvIhGpVykSNoIQ1nkiMTaa4BKA6n0JxLmjOd6hw1UzSTsIy5QJ0CV3kc52xCLre5nW3fe-N8UpcuM1WlG9P2LlEQKUGl-BeiGihwOcCLP3DV9rYZmkgojWgUMxYP6GyH-rQ2y6SzZa3tOvkZ5v47N5SaN2P3KQjJZkvJ95YGeL6Fjd5M_DepcSlQ2NCIfQFKt4rZ</recordid><startdate>20000201</startdate><enddate>20000201</enddate><creator>Jia, Zongchao</creator><creator>Lim, Daniel</creator><creator>Golovan, Serguei</creator><creator>Forsberg, Cecil W</creator><general>Nature Publishing Group US</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PADUT</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20000201</creationdate><title>Crystal structures of Escherichia coli phytase and its complex with phytate</title><author>Jia, Zongchao ; Lim, Daniel ; Golovan, Serguei ; Forsberg, Cecil W</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c358t-1e7b45f10a56e4364135bfa0021fa05a4462f3abaf1a372c60d9451ab047f99f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>6-Phytase - chemistry</topic><topic>6-Phytase - genetics</topic><topic>6-Phytase - metabolism</topic><topic>Acidity</topic><topic>Amino Acid Motifs</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - metabolism</topic><topic>Binding Sites</topic><topic>Biochemistry</topic><topic>Biological Microscopy</topic><topic>Biomedical and Life Sciences</topic><topic>Catalysis</topic><topic>Crystallography, X-Ray</topic><topic>E coli</topic><topic>Escherichia coli</topic><topic>Escherichia coli - enzymology</topic><topic>letter</topic><topic>Life Sciences</topic><topic>Membrane Biology</topic><topic>Models, Molecular</topic><topic>Mutation</topic><topic>Nutritive value</topic><topic>phytic acid</topic><topic>Phytic Acid - chemistry</topic><topic>Phytic Acid - metabolism</topic><topic>Protein Conformation</topic><topic>Protein Structure</topic><topic>Tungsten</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jia, Zongchao</creatorcontrib><creatorcontrib>Lim, Daniel</creatorcontrib><creatorcontrib>Golovan, Serguei</creatorcontrib><creatorcontrib>Forsberg, Cecil W</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Research Library China</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Nature Structural Biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jia, Zongchao</au><au>Lim, Daniel</au><au>Golovan, Serguei</au><au>Forsberg, Cecil W</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Crystal structures of Escherichia coli phytase and its complex with phytate</atitle><jtitle>Nature Structural Biology</jtitle><stitle>Nat Struct Mol Biol</stitle><addtitle>Nat Struct Biol</addtitle><date>2000-02-01</date><risdate>2000</risdate><volume>7</volume><issue>2</issue><spage>108</spage><epage>113</epage><pages>108-113</pages><issn>1072-8368</issn><issn>1545-9993</issn><eissn>2331-365X</eissn><eissn>1545-9985</eissn><abstract>Phytases catalyze the hydrolysis of phytate and are able to improve the nutritional quality of phytate-rich diets. Escherichia coli phytase, a member of the histidine acid phosphatase family has the highest specific activity of all phytases characterized. The crystal structure of E. coli phytase has been determined by a two-wavelength anomalous diffraction method using the exceptionally strong anomalous scattering of tungsten. Despite a lack of sequence similarity, the structure closely resembles the overall fold of other histidine acid phosphatases. The structure of E. coli phytase in complex with phytate, the preferred substrate, reveals the binding mode and substrate recognition. The binding is also accompanied by conformational changes which suggest that substrate binding enhances catalysis by increasing the acidity of the general acid.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><pmid>10655611</pmid><doi>10.1038/72371</doi><tpages>6</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1072-8368
ispartof Nature Structural Biology, 2000-02, Vol.7 (2), p.108-113
issn 1072-8368
1545-9993
2331-365X
1545-9985
language eng
recordid cdi_proquest_miscellaneous_70875265
source MEDLINE; Nature; Alma/SFX Local Collection
subjects 6-Phytase - chemistry
6-Phytase - genetics
6-Phytase - metabolism
Acidity
Amino Acid Motifs
Bacterial Proteins - chemistry
Bacterial Proteins - metabolism
Binding Sites
Biochemistry
Biological Microscopy
Biomedical and Life Sciences
Catalysis
Crystallography, X-Ray
E coli
Escherichia coli
Escherichia coli - enzymology
letter
Life Sciences
Membrane Biology
Models, Molecular
Mutation
Nutritive value
phytic acid
Phytic Acid - chemistry
Phytic Acid - metabolism
Protein Conformation
Protein Structure
Tungsten
title Crystal structures of Escherichia coli phytase and its complex with phytate
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-29T07%3A53%3A26IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Crystal%20structures%20of%20Escherichia%20coli%20phytase%20and%20its%20complex%20with%20phytate&rft.jtitle=Nature%20Structural%20Biology&rft.au=Jia,%20Zongchao&rft.date=2000-02-01&rft.volume=7&rft.issue=2&rft.spage=108&rft.epage=113&rft.pages=108-113&rft.issn=1072-8368&rft.eissn=2331-365X&rft_id=info:doi/10.1038/72371&rft_dat=%3Cproquest_pubme%3E70875265%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=228289339&rft_id=info:pmid/10655611&rfr_iscdi=true