Flavohemoglobin, a Globin with a Peroxidase-like Catalytic Site
Biochemical studies of flavohemoglobin (Hmp) from Escherichia coli suggest that instead of aerobic oxygen delivery, a dioxygenase converts NO to NO3− and anaerobically, an NO reductase converts NO to N2O. To investigate the structural features underlying the chemical reactivity of Hmp, we have measu...
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description | Biochemical studies of flavohemoglobin (Hmp) from Escherichia coli suggest that instead of aerobic oxygen delivery, a dioxygenase converts NO to NO3− and anaerobically, an NO reductase converts NO to N2O. To investigate the structural features underlying the chemical reactivity of Hmp, we have measured the resonance Raman spectra of the ligand-free ferric and ferrous protein and the CO derivatives of the ferrous protein. At neutral pH, the ferric protein has a five-coordinate high-spin heme, similar to peroxidases. In the ferrous protein, a strong iron-histidine stretching mode is present at 244 cm−1. This frequency is much higher than that of any other globin discovered to date, although it is comparable to those of peroxidases, suggesting that the proximal histidine has imidazolate character. In the CO derivative, an open and a closed conformation were detected. The distal environment of the closed conformation is very polar, where the heme-bound CO strongly interacts with the B10 Tyr and/or the E7 Gln. These data demonstrate that the active site structure of Hmp is very similar to that of peroxidases and is tailored to perform oxygen chemistry. |
doi_str_mv | 10.1074/jbc.M009280200 |
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To investigate the structural features underlying the chemical reactivity of Hmp, we have measured the resonance Raman spectra of the ligand-free ferric and ferrous protein and the CO derivatives of the ferrous protein. At neutral pH, the ferric protein has a five-coordinate high-spin heme, similar to peroxidases. In the ferrous protein, a strong iron-histidine stretching mode is present at 244 cm−1. This frequency is much higher than that of any other globin discovered to date, although it is comparable to those of peroxidases, suggesting that the proximal histidine has imidazolate character. In the CO derivative, an open and a closed conformation were detected. The distal environment of the closed conformation is very polar, where the heme-bound CO strongly interacts with the B10 Tyr and/or the E7 Gln. These data demonstrate that the active site structure of Hmp is very similar to that of peroxidases and is tailored to perform oxygen chemistry.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1074/jbc.M009280200</identifier><identifier>PMID: 11092893</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Bacterial Proteins - chemistry ; Binding Sites ; Carbon - chemistry ; Catalytic Domain ; Cloning, Molecular ; Dihydropteridine Reductase ; Escherichia coli ; Escherichia coli Proteins ; flavohemoglobin ; Hemeproteins - chemistry ; Hemeproteins - genetics ; Hydrogen-Ion Concentration ; Iron - metabolism ; Ligands ; Models, Chemical ; Models, Molecular ; NADH, NADPH Oxidoreductases ; Nitric Oxide - metabolism ; Oxidoreductases - metabolism ; Oxygen - chemistry ; Oxygen - metabolism ; Oxygenases ; Peroxidase - chemistry ; Protein Conformation ; Spectrum Analysis, Raman</subject><ispartof>The Journal of biological chemistry, 2001-03, Vol.276 (10), p.7272-7277</ispartof><rights>2001 © 2001 ASBMB. 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To investigate the structural features underlying the chemical reactivity of Hmp, we have measured the resonance Raman spectra of the ligand-free ferric and ferrous protein and the CO derivatives of the ferrous protein. At neutral pH, the ferric protein has a five-coordinate high-spin heme, similar to peroxidases. In the ferrous protein, a strong iron-histidine stretching mode is present at 244 cm−1. This frequency is much higher than that of any other globin discovered to date, although it is comparable to those of peroxidases, suggesting that the proximal histidine has imidazolate character. In the CO derivative, an open and a closed conformation were detected. The distal environment of the closed conformation is very polar, where the heme-bound CO strongly interacts with the B10 Tyr and/or the E7 Gln. 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Mills, Catherine E. ; Poole, Robert K. ; Yeh, Syun-Ru</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-2ab1291175a1dfef0b1faa32a7e78854a3ee1e98e805843e5bf5f5417f979eb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Bacterial Proteins - chemistry</topic><topic>Binding Sites</topic><topic>Carbon - chemistry</topic><topic>Catalytic Domain</topic><topic>Cloning, Molecular</topic><topic>Dihydropteridine Reductase</topic><topic>Escherichia coli</topic><topic>Escherichia coli Proteins</topic><topic>flavohemoglobin</topic><topic>Hemeproteins - chemistry</topic><topic>Hemeproteins - genetics</topic><topic>Hydrogen-Ion Concentration</topic><topic>Iron - metabolism</topic><topic>Ligands</topic><topic>Models, Chemical</topic><topic>Models, Molecular</topic><topic>NADH, NADPH Oxidoreductases</topic><topic>Nitric Oxide - metabolism</topic><topic>Oxidoreductases - metabolism</topic><topic>Oxygen - chemistry</topic><topic>Oxygen - metabolism</topic><topic>Oxygenases</topic><topic>Peroxidase - chemistry</topic><topic>Protein Conformation</topic><topic>Spectrum Analysis, Raman</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mukai, Masahiro</creatorcontrib><creatorcontrib>Mills, Catherine E.</creatorcontrib><creatorcontrib>Poole, Robert K.</creatorcontrib><creatorcontrib>Yeh, Syun-Ru</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mukai, Masahiro</au><au>Mills, Catherine E.</au><au>Poole, Robert K.</au><au>Yeh, Syun-Ru</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Flavohemoglobin, a Globin with a Peroxidase-like Catalytic Site</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2001-03-09</date><risdate>2001</risdate><volume>276</volume><issue>10</issue><spage>7272</spage><epage>7277</epage><pages>7272-7277</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><abstract>Biochemical studies of flavohemoglobin (Hmp) from Escherichia coli suggest that instead of aerobic oxygen delivery, a dioxygenase converts NO to NO3− and anaerobically, an NO reductase converts NO to N2O. To investigate the structural features underlying the chemical reactivity of Hmp, we have measured the resonance Raman spectra of the ligand-free ferric and ferrous protein and the CO derivatives of the ferrous protein. At neutral pH, the ferric protein has a five-coordinate high-spin heme, similar to peroxidases. In the ferrous protein, a strong iron-histidine stretching mode is present at 244 cm−1. This frequency is much higher than that of any other globin discovered to date, although it is comparable to those of peroxidases, suggesting that the proximal histidine has imidazolate character. In the CO derivative, an open and a closed conformation were detected. The distal environment of the closed conformation is very polar, where the heme-bound CO strongly interacts with the B10 Tyr and/or the E7 Gln. 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subjects | Bacterial Proteins - chemistry Binding Sites Carbon - chemistry Catalytic Domain Cloning, Molecular Dihydropteridine Reductase Escherichia coli Escherichia coli Proteins flavohemoglobin Hemeproteins - chemistry Hemeproteins - genetics Hydrogen-Ion Concentration Iron - metabolism Ligands Models, Chemical Models, Molecular NADH, NADPH Oxidoreductases Nitric Oxide - metabolism Oxidoreductases - metabolism Oxygen - chemistry Oxygen - metabolism Oxygenases Peroxidase - chemistry Protein Conformation Spectrum Analysis, Raman |
title | Flavohemoglobin, a Globin with a Peroxidase-like Catalytic Site |
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