A Closed-Cycle Capillary Polymerase Chain Reaction Machine

A novel thermocycling machine based on a microcapillary equipped with bidirectional pressure-driven flow and in situ optical position sensors is described. A 1-μL droplet of reaction mixture moves between three heat zones in a 1-mm-i.d., oil-filled capillary using a multielement scattered light dete...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Analytical chemistry (Washington) 2001-05, Vol.73 (9), p.2018-2021
Hauptverfasser: Chiou, Jeff, Matsudaira, Paul, Sonin, Ain, Ehrlich, Daniel
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 2021
container_issue 9
container_start_page 2018
container_title Analytical chemistry (Washington)
container_volume 73
creator Chiou, Jeff
Matsudaira, Paul
Sonin, Ain
Ehrlich, Daniel
description A novel thermocycling machine based on a microcapillary equipped with bidirectional pressure-driven flow and in situ optical position sensors is described. A 1-μL droplet of reaction mixture moves between three heat zones in a 1-mm-i.d., oil-filled capillary using a multielement scattered light detector and active feedback. Dwell times and accelerations can be adjusted independently. As a demonstration of the device, 30 cycles of a 500-base pair product were performed in 23 min with 78% amplification efficiency. This result compares well with previous high-speed thermocyclers. Theoretically, the arrangement can approach a time of 2.5 min for 30 cycle amplifications of a 500-base pair product.
doi_str_mv 10.1021/ac001227f
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_70842237</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>73287596</sourcerecordid><originalsourceid>FETCH-LOGICAL-a471t-75e74a0c7b0b94e1f887362bae600bc4c1a77294d48ca164ac29d7093ce17f853</originalsourceid><addsrcrecordid>eNpl0MtKxDAUBuAgio6XhS8gRVRwUT25tCfjTouOgqJ42bgJp5kUq512TGbAeXsjM6joKpB8_PnPYWybwxEHwY_JAnAhsFpiPZ4JSHOtxTLrAYBMBQKssfUQXiPiwPNVtsa5zJTSqsdOTpOi6YIbpsXMNi4paFw3DflZctc1s5HzFOLlC9Vtcu_ITuquTW7IvtSt22QrFTXBbS3ODfZ0cf5YXKbXt4Or4vQ6JYV8kmLmUBFYLKHsK8crrVHmoiSXA5RWWU6Ioq-GSlviuSIr-kOEvrSOY6UzucEO5rlj371PXZiYUR2siy1b102DQdBKCIkR7v6Br93Ut7GbERw1qgy_0g7nyPouBO8qM_b1KA5sOJivbZrvbUa7swicliM3_JGL9UWwtwAULDWVp9bW4VciyvhxZOmc1WHiPr6fyb-ZHCVm5vHuweizwUMuYWCeo9-fe7LhZ4b__T4BhqOT0Q</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>217874575</pqid></control><display><type>article</type><title>A Closed-Cycle Capillary Polymerase Chain Reaction Machine</title><source>MEDLINE</source><source>American Chemical Society Journals</source><creator>Chiou, Jeff ; Matsudaira, Paul ; Sonin, Ain ; Ehrlich, Daniel</creator><creatorcontrib>Chiou, Jeff ; Matsudaira, Paul ; Sonin, Ain ; Ehrlich, Daniel</creatorcontrib><description>A novel thermocycling machine based on a microcapillary equipped with bidirectional pressure-driven flow and in situ optical position sensors is described. A 1-μL droplet of reaction mixture moves between three heat zones in a 1-mm-i.d., oil-filled capillary using a multielement scattered light detector and active feedback. Dwell times and accelerations can be adjusted independently. As a demonstration of the device, 30 cycles of a 500-base pair product were performed in 23 min with 78% amplification efficiency. This result compares well with previous high-speed thermocyclers. Theoretically, the arrangement can approach a time of 2.5 min for 30 cycle amplifications of a 500-base pair product.</description><identifier>ISSN: 0003-2700</identifier><identifier>EISSN: 1520-6882</identifier><identifier>DOI: 10.1021/ac001227f</identifier><identifier>PMID: 11354484</identifier><identifier>CODEN: ANCHAM</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Biological and medical sciences ; Chemistry ; Diverse techniques ; DNA - analysis ; Fundamental and applied biological sciences. Psychology ; Hot Temperature ; Instruments ; Molecular and cellular biology ; Optics ; Polymerase Chain Reaction - instrumentation ; Polymerase Chain Reaction - standards ; Sensors ; Time</subject><ispartof>Analytical chemistry (Washington), 2001-05, Vol.73 (9), p.2018-2021</ispartof><rights>Copyright © 2001 American Chemical Society</rights><rights>2001 INIST-CNRS</rights><rights>Copyright American Chemical Society May 1, 2001</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a471t-75e74a0c7b0b94e1f887362bae600bc4c1a77294d48ca164ac29d7093ce17f853</citedby><cites>FETCH-LOGICAL-a471t-75e74a0c7b0b94e1f887362bae600bc4c1a77294d48ca164ac29d7093ce17f853</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/ac001227f$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/ac001227f$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,776,780,2752,27053,27901,27902,56713,56763</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=1073178$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11354484$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chiou, Jeff</creatorcontrib><creatorcontrib>Matsudaira, Paul</creatorcontrib><creatorcontrib>Sonin, Ain</creatorcontrib><creatorcontrib>Ehrlich, Daniel</creatorcontrib><title>A Closed-Cycle Capillary Polymerase Chain Reaction Machine</title><title>Analytical chemistry (Washington)</title><addtitle>Anal. Chem</addtitle><description>A novel thermocycling machine based on a microcapillary equipped with bidirectional pressure-driven flow and in situ optical position sensors is described. A 1-μL droplet of reaction mixture moves between three heat zones in a 1-mm-i.d., oil-filled capillary using a multielement scattered light detector and active feedback. Dwell times and accelerations can be adjusted independently. As a demonstration of the device, 30 cycles of a 500-base pair product were performed in 23 min with 78% amplification efficiency. This result compares well with previous high-speed thermocyclers. Theoretically, the arrangement can approach a time of 2.5 min for 30 cycle amplifications of a 500-base pair product.</description><subject>Biological and medical sciences</subject><subject>Chemistry</subject><subject>Diverse techniques</subject><subject>DNA - analysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hot Temperature</subject><subject>Instruments</subject><subject>Molecular and cellular biology</subject><subject>Optics</subject><subject>Polymerase Chain Reaction - instrumentation</subject><subject>Polymerase Chain Reaction - standards</subject><subject>Sensors</subject><subject>Time</subject><issn>0003-2700</issn><issn>1520-6882</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpl0MtKxDAUBuAgio6XhS8gRVRwUT25tCfjTouOgqJ42bgJp5kUq512TGbAeXsjM6joKpB8_PnPYWybwxEHwY_JAnAhsFpiPZ4JSHOtxTLrAYBMBQKssfUQXiPiwPNVtsa5zJTSqsdOTpOi6YIbpsXMNi4paFw3DflZctc1s5HzFOLlC9Vtcu_ITuquTW7IvtSt22QrFTXBbS3ODfZ0cf5YXKbXt4Or4vQ6JYV8kmLmUBFYLKHsK8crrVHmoiSXA5RWWU6Ioq-GSlviuSIr-kOEvrSOY6UzucEO5rlj371PXZiYUR2siy1b102DQdBKCIkR7v6Br93Ut7GbERw1qgy_0g7nyPouBO8qM_b1KA5sOJivbZrvbUa7swicliM3_JGL9UWwtwAULDWVp9bW4VciyvhxZOmc1WHiPr6fyb-ZHCVm5vHuweizwUMuYWCeo9-fe7LhZ4b__T4BhqOT0Q</recordid><startdate>20010501</startdate><enddate>20010501</enddate><creator>Chiou, Jeff</creator><creator>Matsudaira, Paul</creator><creator>Sonin, Ain</creator><creator>Ehrlich, Daniel</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7TM</scope><scope>7U5</scope><scope>7U7</scope><scope>7U9</scope><scope>8BQ</scope><scope>8FD</scope><scope>C1K</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>H8G</scope><scope>H94</scope><scope>JG9</scope><scope>JQ2</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20010501</creationdate><title>A Closed-Cycle Capillary Polymerase Chain Reaction Machine</title><author>Chiou, Jeff ; Matsudaira, Paul ; Sonin, Ain ; Ehrlich, Daniel</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a471t-75e74a0c7b0b94e1f887362bae600bc4c1a77294d48ca164ac29d7093ce17f853</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Biological and medical sciences</topic><topic>Chemistry</topic><topic>Diverse techniques</topic><topic>DNA - analysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hot Temperature</topic><topic>Instruments</topic><topic>Molecular and cellular biology</topic><topic>Optics</topic><topic>Polymerase Chain Reaction - instrumentation</topic><topic>Polymerase Chain Reaction - standards</topic><topic>Sensors</topic><topic>Time</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chiou, Jeff</creatorcontrib><creatorcontrib>Matsudaira, Paul</creatorcontrib><creatorcontrib>Sonin, Ain</creatorcontrib><creatorcontrib>Ehrlich, Daniel</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics &amp; Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical &amp; Transportation Engineering Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ANTE: Abstracts in New Technology &amp; Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Copper Technical Reference Library</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts – Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Analytical chemistry (Washington)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chiou, Jeff</au><au>Matsudaira, Paul</au><au>Sonin, Ain</au><au>Ehrlich, Daniel</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Closed-Cycle Capillary Polymerase Chain Reaction Machine</atitle><jtitle>Analytical chemistry (Washington)</jtitle><addtitle>Anal. Chem</addtitle><date>2001-05-01</date><risdate>2001</risdate><volume>73</volume><issue>9</issue><spage>2018</spage><epage>2021</epage><pages>2018-2021</pages><issn>0003-2700</issn><eissn>1520-6882</eissn><coden>ANCHAM</coden><abstract>A novel thermocycling machine based on a microcapillary equipped with bidirectional pressure-driven flow and in situ optical position sensors is described. A 1-μL droplet of reaction mixture moves between three heat zones in a 1-mm-i.d., oil-filled capillary using a multielement scattered light detector and active feedback. Dwell times and accelerations can be adjusted independently. As a demonstration of the device, 30 cycles of a 500-base pair product were performed in 23 min with 78% amplification efficiency. This result compares well with previous high-speed thermocyclers. Theoretically, the arrangement can approach a time of 2.5 min for 30 cycle amplifications of a 500-base pair product.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>11354484</pmid><doi>10.1021/ac001227f</doi><tpages>4</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0003-2700
ispartof Analytical chemistry (Washington), 2001-05, Vol.73 (9), p.2018-2021
issn 0003-2700
1520-6882
language eng
recordid cdi_proquest_miscellaneous_70842237
source MEDLINE; American Chemical Society Journals
subjects Biological and medical sciences
Chemistry
Diverse techniques
DNA - analysis
Fundamental and applied biological sciences. Psychology
Hot Temperature
Instruments
Molecular and cellular biology
Optics
Polymerase Chain Reaction - instrumentation
Polymerase Chain Reaction - standards
Sensors
Time
title A Closed-Cycle Capillary Polymerase Chain Reaction Machine
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-04T10%3A29%3A54IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=A%20Closed-Cycle%20Capillary%20Polymerase%20Chain%20Reaction%20Machine&rft.jtitle=Analytical%20chemistry%20(Washington)&rft.au=Chiou,%20Jeff&rft.date=2001-05-01&rft.volume=73&rft.issue=9&rft.spage=2018&rft.epage=2021&rft.pages=2018-2021&rft.issn=0003-2700&rft.eissn=1520-6882&rft.coden=ANCHAM&rft_id=info:doi/10.1021/ac001227f&rft_dat=%3Cproquest_cross%3E73287596%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=217874575&rft_id=info:pmid/11354484&rfr_iscdi=true