Expanded geographical distribution of Myxobolus cerebralis: first detections from Alaska
The parasite responsible for salmonid whirling disease, Myxobolus cerebralis, was introduced to the USA in 1958. It has since spread across the country causing severe declines in wild trout populations, but has never been documented from Alaska. However, while assessing the risk of introduction of M...
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description | The parasite responsible for salmonid whirling disease, Myxobolus cerebralis, was introduced to the USA in 1958. It has since spread across the country causing severe declines in wild trout populations, but has never been documented from Alaska. However, while assessing the risk of introduction of M. cerebralis into the state, we detected the parasite using a species-specific polymerase chain reaction (PCR) assay. Testing of 180 hatchery rainbow trout, Oncorhynchus mykiss (Walbaum), by pepsin trypsin digest (PTD) and quantitative PCR (QPCR) revealed 14 positive samples. Infection was confirmed by sequencing the parasite 18S rRNA gene and by a nested PCR assay based on the same gene. Sequence comparison of M. cerebralis from several locations demonstrated the Alaska isolates were genetically distinct and therefore not false-positives arising from contamination during processing. We were unable to visually identify myxospores, indicating that either infection was light or mature spores had not formed. A reference set of fish samples spiked with known numbers of myxospores verified the QPCR and PTD results. This paper presents DNA sequence data from the Alaska M. cerebralis isolates, provides a brief history of the fish and facility of origin, and discusses implications of different testing methods on asymptomatic fish populations. |
doi_str_mv | 10.1111/j.1365-2761.2007.00834.x |
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It has since spread across the country causing severe declines in wild trout populations, but has never been documented from Alaska. However, while assessing the risk of introduction of M. cerebralis into the state, we detected the parasite using a species-specific polymerase chain reaction (PCR) assay. Testing of 180 hatchery rainbow trout, Oncorhynchus mykiss (Walbaum), by pepsin trypsin digest (PTD) and quantitative PCR (QPCR) revealed 14 positive samples. Infection was confirmed by sequencing the parasite 18S rRNA gene and by a nested PCR assay based on the same gene. Sequence comparison of M. cerebralis from several locations demonstrated the Alaska isolates were genetically distinct and therefore not false-positives arising from contamination during processing. We were unable to visually identify myxospores, indicating that either infection was light or mature spores had not formed. A reference set of fish samples spiked with known numbers of myxospores verified the QPCR and PTD results. This paper presents DNA sequence data from the Alaska M. cerebralis isolates, provides a brief history of the fish and facility of origin, and discusses implications of different testing methods on asymptomatic fish populations.</description><identifier>ISSN: 0140-7775</identifier><identifier>EISSN: 1365-2761</identifier><identifier>DOI: 10.1111/j.1365-2761.2007.00834.x</identifier><identifier>PMID: 17640251</identifier><language>eng</language><publisher>Oxford, UK: Oxford, UK : Blackwell Publishing Ltd</publisher><subject>Alaska ; Alaska - epidemiology ; Animals ; Base Sequence ; detection methods ; DNA sequencing ; DNA, Ribosomal - chemistry ; Eukaryota - genetics ; Eukaryota - isolation & purification ; Fish Diseases - epidemiology ; Fish Diseases - parasitology ; Genetic Variation ; Geography ; Molecular Sequence Data ; Myxobolus cerebralis ; Oncorhynchus mykiss ; Oncorhynchus mykiss - parasitology ; Polymerase Chain Reaction - veterinary ; Protozoan Infections, Animal - epidemiology ; rainbow trout ; RNA, Ribosomal, 18S - genetics ; Sensitivity and Specificity ; Sequence Alignment ; sequence analysis ; Spores, Protozoan - isolation & purification ; whirling disease</subject><ispartof>Journal of fish diseases, 2007-08, Vol.30 (8), p.483-491</ispartof><rights>2007 The Authors. Journal compilation 2007 Blackwell Publishing Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4554-171cb65f0ed3a766237b6aa9a720172f50bc40f024e7428f8bc86cc4abcb31553</citedby><cites>FETCH-LOGICAL-c4554-171cb65f0ed3a766237b6aa9a720172f50bc40f024e7428f8bc86cc4abcb31553</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1365-2761.2007.00834.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1365-2761.2007.00834.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17640251$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Arsan, E.L</creatorcontrib><creatorcontrib>Atkinson, S.D</creatorcontrib><creatorcontrib>Hallett, S.L</creatorcontrib><creatorcontrib>Meyers, T</creatorcontrib><creatorcontrib>Bartholomew, J.L</creatorcontrib><title>Expanded geographical distribution of Myxobolus cerebralis: first detections from Alaska</title><title>Journal of fish diseases</title><addtitle>J Fish Dis</addtitle><description>The parasite responsible for salmonid whirling disease, Myxobolus cerebralis, was introduced to the USA in 1958. It has since spread across the country causing severe declines in wild trout populations, but has never been documented from Alaska. However, while assessing the risk of introduction of M. cerebralis into the state, we detected the parasite using a species-specific polymerase chain reaction (PCR) assay. Testing of 180 hatchery rainbow trout, Oncorhynchus mykiss (Walbaum), by pepsin trypsin digest (PTD) and quantitative PCR (QPCR) revealed 14 positive samples. Infection was confirmed by sequencing the parasite 18S rRNA gene and by a nested PCR assay based on the same gene. Sequence comparison of M. cerebralis from several locations demonstrated the Alaska isolates were genetically distinct and therefore not false-positives arising from contamination during processing. We were unable to visually identify myxospores, indicating that either infection was light or mature spores had not formed. A reference set of fish samples spiked with known numbers of myxospores verified the QPCR and PTD results. This paper presents DNA sequence data from the Alaska M. cerebralis isolates, provides a brief history of the fish and facility of origin, and discusses implications of different testing methods on asymptomatic fish populations.</description><subject>Alaska</subject><subject>Alaska - epidemiology</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>detection methods</subject><subject>DNA sequencing</subject><subject>DNA, Ribosomal - chemistry</subject><subject>Eukaryota - genetics</subject><subject>Eukaryota - isolation & purification</subject><subject>Fish Diseases - epidemiology</subject><subject>Fish Diseases - parasitology</subject><subject>Genetic Variation</subject><subject>Geography</subject><subject>Molecular Sequence Data</subject><subject>Myxobolus cerebralis</subject><subject>Oncorhynchus mykiss</subject><subject>Oncorhynchus mykiss - parasitology</subject><subject>Polymerase Chain Reaction - veterinary</subject><subject>Protozoan Infections, Animal - epidemiology</subject><subject>rainbow trout</subject><subject>RNA, Ribosomal, 18S - genetics</subject><subject>Sensitivity and Specificity</subject><subject>Sequence Alignment</subject><subject>sequence analysis</subject><subject>Spores, Protozoan - isolation & purification</subject><subject>whirling disease</subject><issn>0140-7775</issn><issn>1365-2761</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU-PEyEYh4nRuHX1Kyjx4G1G_jM1Xta6WzVdjdGN3ggwUOlOS4WZOP32MrZZE09ygeR9fr-8eQAAYlTjcl5uakwFr4gUuCYIyRqhhrJ6vAdmd4P7YIYwQ5WUkp-BRzlvEMKSY_EQnGEpGCIcz8D3y3Gvd61r4drFddL7H8HqDrYh9ymYoQ9xB6OH14cxmtgNGVqXnEm6C_kV9CHlHraud3YCM_QpbuFFp_OtfgweeN1l9-R0n4Obq8uvi3fV6tPy_eJiVVnGOauwxNYI7pFrqZZCECqN0HquJSnbEs-RsQx5RJiTjDS-MbYR1jJtrKGYc3oOXhx79yn-HFzu1TZk67pO71wcspKo5OaEFvD5P-AmDmlXdlMEcTZnjExtzRGyKeacnFf7FLY6HRRGalKvNmoyrCbDalKv_qhXY4k-PfUPZuvav8GT6wK8PgK_QucO_12sPly9LY8Sr47x8jVuvIvrdKuEpJKrbx-Xir1ZNdeflwslC__syHsdlV6nkNXNlyKVlu5mjpCgvwFJC6oC</recordid><startdate>200708</startdate><enddate>200708</enddate><creator>Arsan, E.L</creator><creator>Atkinson, S.D</creator><creator>Hallett, S.L</creator><creator>Meyers, T</creator><creator>Bartholomew, J.L</creator><general>Oxford, UK : Blackwell Publishing Ltd</general><general>Blackwell Publishing Ltd</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TN</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H94</scope><scope>H95</scope><scope>H98</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>200708</creationdate><title>Expanded geographical distribution of Myxobolus cerebralis: first detections from Alaska</title><author>Arsan, E.L ; Atkinson, S.D ; Hallett, S.L ; Meyers, T ; Bartholomew, J.L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4554-171cb65f0ed3a766237b6aa9a720172f50bc40f024e7428f8bc86cc4abcb31553</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Alaska</topic><topic>Alaska - epidemiology</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>detection methods</topic><topic>DNA sequencing</topic><topic>DNA, Ribosomal - chemistry</topic><topic>Eukaryota - genetics</topic><topic>Eukaryota - isolation & purification</topic><topic>Fish Diseases - epidemiology</topic><topic>Fish Diseases - parasitology</topic><topic>Genetic Variation</topic><topic>Geography</topic><topic>Molecular Sequence Data</topic><topic>Myxobolus cerebralis</topic><topic>Oncorhynchus mykiss</topic><topic>Oncorhynchus mykiss - parasitology</topic><topic>Polymerase Chain Reaction - veterinary</topic><topic>Protozoan Infections, Animal - epidemiology</topic><topic>rainbow trout</topic><topic>RNA, Ribosomal, 18S - genetics</topic><topic>Sensitivity and Specificity</topic><topic>Sequence Alignment</topic><topic>sequence analysis</topic><topic>Spores, Protozoan - isolation & purification</topic><topic>whirling disease</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Arsan, E.L</creatorcontrib><creatorcontrib>Atkinson, S.D</creatorcontrib><creatorcontrib>Hallett, S.L</creatorcontrib><creatorcontrib>Meyers, T</creatorcontrib><creatorcontrib>Bartholomew, J.L</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Oceanic Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Aquaculture Abstracts</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of fish diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Arsan, E.L</au><au>Atkinson, S.D</au><au>Hallett, S.L</au><au>Meyers, T</au><au>Bartholomew, J.L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expanded geographical distribution of Myxobolus cerebralis: first detections from Alaska</atitle><jtitle>Journal of fish diseases</jtitle><addtitle>J Fish Dis</addtitle><date>2007-08</date><risdate>2007</risdate><volume>30</volume><issue>8</issue><spage>483</spage><epage>491</epage><pages>483-491</pages><issn>0140-7775</issn><eissn>1365-2761</eissn><abstract>The parasite responsible for salmonid whirling disease, Myxobolus cerebralis, was introduced to the USA in 1958. It has since spread across the country causing severe declines in wild trout populations, but has never been documented from Alaska. However, while assessing the risk of introduction of M. cerebralis into the state, we detected the parasite using a species-specific polymerase chain reaction (PCR) assay. Testing of 180 hatchery rainbow trout, Oncorhynchus mykiss (Walbaum), by pepsin trypsin digest (PTD) and quantitative PCR (QPCR) revealed 14 positive samples. Infection was confirmed by sequencing the parasite 18S rRNA gene and by a nested PCR assay based on the same gene. Sequence comparison of M. cerebralis from several locations demonstrated the Alaska isolates were genetically distinct and therefore not false-positives arising from contamination during processing. We were unable to visually identify myxospores, indicating that either infection was light or mature spores had not formed. A reference set of fish samples spiked with known numbers of myxospores verified the QPCR and PTD results. This paper presents DNA sequence data from the Alaska M. cerebralis isolates, provides a brief history of the fish and facility of origin, and discusses implications of different testing methods on asymptomatic fish populations.</abstract><cop>Oxford, UK</cop><pub>Oxford, UK : Blackwell Publishing Ltd</pub><pmid>17640251</pmid><doi>10.1111/j.1365-2761.2007.00834.x</doi><tpages>9</tpages></addata></record> |
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subjects | Alaska Alaska - epidemiology Animals Base Sequence detection methods DNA sequencing DNA, Ribosomal - chemistry Eukaryota - genetics Eukaryota - isolation & purification Fish Diseases - epidemiology Fish Diseases - parasitology Genetic Variation Geography Molecular Sequence Data Myxobolus cerebralis Oncorhynchus mykiss Oncorhynchus mykiss - parasitology Polymerase Chain Reaction - veterinary Protozoan Infections, Animal - epidemiology rainbow trout RNA, Ribosomal, 18S - genetics Sensitivity and Specificity Sequence Alignment sequence analysis Spores, Protozoan - isolation & purification whirling disease |
title | Expanded geographical distribution of Myxobolus cerebralis: first detections from Alaska |
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