Belnapia moabensis gen. nov., sp. nov., an alphaproteobacterium from biological soil crusts in the Colorado Plateau, USA
School of Life Sciences, Arizona State University, Main Campus, Tempe, AZ 85287-4501, USA Correspondence Ferran Garcia-Pichel ferran{at}asu.edu Strain CP2C T was isolated from biological soil crusts in the Colorado Plateau, USA. The isolate was aerobic, facultatively fermentative, Gram-negative, non...
Gespeichert in:
| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2006-01, Vol.56 (1), p.51-58 |
|---|---|
| Hauptverfasser: | , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 58 |
|---|---|
| container_issue | 1 |
| container_start_page | 51 |
| container_title | International journal of systematic and evolutionary microbiology |
| container_volume | 56 |
| creator | Reddy, Gundlapally S. N Nagy, Moria Garcia-Pichel, Ferran |
| description | School of Life Sciences, Arizona State University, Main Campus, Tempe, AZ 85287-4501, USA
Correspondence Ferran Garcia-Pichel ferran{at}asu.edu
Strain CP2C T was isolated from biological soil crusts in the Colorado Plateau, USA. The isolate was aerobic, facultatively fermentative, Gram-negative, non-motile and red-pigmented (due to the presence of carotenoids), but did not contain bacteriochlorophyll a . The strain tested positive for catalase, oxidase and urease and was negative for lysine and ornithine decarboxylases and arginine dihydrolase. The major fatty acids present were C 18 : 1 7 c and C 16 : 0 . It had a high DNA G+C content of 75 mol%. Comparisons of 16S rRNA gene sequences identified bacteriochlorophyll a -producing strains of Paracraurococcus ruber (94·9 %), Craurococcus roseus (92·2 %) and Roseococcus thiosulfatophilus (92·3 %), as well as non-bacteriochlorophyll a -producing bacteria Muricoccus roseus (94·9 %), Roseomonas gilardii (94·2 %) and Roseomonas mucosa (93·8 %), as the bacteria most closely related to strain CP2C T . Phylogenetically, CP2C T was placed roughly equidistantly from the above organisms. Based on its phylogenetic placement and morphological and physiological characteristics, strain CP2C T is assigned to a new genus in the -1 subgroup of the Proteobacteria , for which the name Belnapia gen. nov. is proposed. Strain CP2C T (=ATCC BAA-1043 T =DSM 16746 T ) is proposed as the type strain of the type species of this genus, with the name Belnapia moabensis gen. nov., sp. nov.
Abbreviations: Bchl a , bacteriochlorophyll a ; BSC, biological soil crust; SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CP2C T is AJ871428 .
A 16S rRNA gene sequence similarity matrix, a comparison of nucleotides in the 16S rRNA gene sequence between Belnapia moabensis and related species and UPGMA and maximum-parsimony phylogenetic trees are available as supplementary material in IJSEM Online. |
| doi_str_mv | 10.1099/ijs.0.63764-0 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_70681207</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>70681207</sourcerecordid><originalsourceid>FETCH-LOGICAL-c422t-463e71e7d0f07ce9d3770f34c6e7cd2b60b2c2f8f9acad9c5147e2ea85cf11dd3</originalsourceid><addsrcrecordid>eNqFkU1v1DAQhi0EoqVw5Ip8gVMTxo5jJ8ey4kuqBBL0bE2cya6rJA52wse_x6ULe-Q0o_Gj8at5GHsuoBTQtq_9bSqh1JXRqoAH7FworYsaKvXwXy_1GXuS0i1AHgA8ZmdCK6garc_Zzzc0zrh45FPAjubkE9_TXPI5fC8veVr-djhzHJcDLjGsFDp0K0W_TXyIYeKdD2PYe4cjT8GP3MUtrYn7ma8H4rv8GLEP_POIK-F2yW--XD1ljwYcEz071gt28-7t192H4vrT-4-7q-vCKSnXQumKjCDTwwDGUdtXxsBQKafJuF52Gjrp5NAMLTrsW1cLZUgSNrUbhOj76oK9ut-bg3_bKK128snROOJMYUvWgG6EBPNfUIIULTR1Bot70MWQUqTBLtFPGH9ZAfbOic1OLNg_Tixk_sVx8dZN1J_oo4QMvDwCmPIJh4iz8-nEGSV1LcQp4cHvDz98JJtNTT7HyPe_-7TWVthaVL8Bl0ui8w</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>20219085</pqid></control><display><type>article</type><title>Belnapia moabensis gen. nov., sp. nov., an alphaproteobacterium from biological soil crusts in the Colorado Plateau, USA</title><source>MEDLINE</source><source>Microbiology Society</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Reddy, Gundlapally S. N ; Nagy, Moria ; Garcia-Pichel, Ferran</creator><creatorcontrib>Reddy, Gundlapally S. N ; Nagy, Moria ; Garcia-Pichel, Ferran</creatorcontrib><description>School of Life Sciences, Arizona State University, Main Campus, Tempe, AZ 85287-4501, USA
Correspondence Ferran Garcia-Pichel ferran{at}asu.edu
Strain CP2C T was isolated from biological soil crusts in the Colorado Plateau, USA. The isolate was aerobic, facultatively fermentative, Gram-negative, non-motile and red-pigmented (due to the presence of carotenoids), but did not contain bacteriochlorophyll a . The strain tested positive for catalase, oxidase and urease and was negative for lysine and ornithine decarboxylases and arginine dihydrolase. The major fatty acids present were C 18 : 1 7 c and C 16 : 0 . It had a high DNA G+C content of 75 mol%. Comparisons of 16S rRNA gene sequences identified bacteriochlorophyll a -producing strains of Paracraurococcus ruber (94·9 %), Craurococcus roseus (92·2 %) and Roseococcus thiosulfatophilus (92·3 %), as well as non-bacteriochlorophyll a -producing bacteria Muricoccus roseus (94·9 %), Roseomonas gilardii (94·2 %) and Roseomonas mucosa (93·8 %), as the bacteria most closely related to strain CP2C T . Phylogenetically, CP2C T was placed roughly equidistantly from the above organisms. Based on its phylogenetic placement and morphological and physiological characteristics, strain CP2C T is assigned to a new genus in the -1 subgroup of the Proteobacteria , for which the name Belnapia gen. nov. is proposed. Strain CP2C T (=ATCC BAA-1043 T =DSM 16746 T ) is proposed as the type strain of the type species of this genus, with the name Belnapia moabensis gen. nov., sp. nov.
Abbreviations: Bchl a , bacteriochlorophyll a ; BSC, biological soil crust; SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CP2C T is AJ871428 .
A 16S rRNA gene sequence similarity matrix, a comparison of nucleotides in the 16S rRNA gene sequence between Belnapia moabensis and related species and UPGMA and maximum-parsimony phylogenetic trees are available as supplementary material in IJSEM Online.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.63764-0</identifier><identifier>PMID: 16403866</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Alphaproteobacteria - chemistry ; Alphaproteobacteria - classification ; Alphaproteobacteria - isolation & purification ; Alphaproteobacteria - physiology ; Bacterial Proteins - biosynthesis ; Bacteriology ; Base Composition ; Biological and medical sciences ; Catalase - metabolism ; Colorado ; Fatty Acids ; Fermentation ; Fundamental and applied biological sciences. Psychology ; Microbiology ; Molecular Sequence Data ; Oxidoreductases - metabolism ; Proteobacteria ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Roseomonas ; Roseomonas gilardii ; Sequence Homology, Nucleic Acid ; Soil Microbiology ; Species Specificity ; Systematics ; Urease - metabolism</subject><ispartof>International journal of systematic and evolutionary microbiology, 2006-01, Vol.56 (1), p.51-58</ispartof><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c422t-463e71e7d0f07ce9d3770f34c6e7cd2b60b2c2f8f9acad9c5147e2ea85cf11dd3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,3733,3734,4010,27904,27905,27906</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17426511$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16403866$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Reddy, Gundlapally S. N</creatorcontrib><creatorcontrib>Nagy, Moria</creatorcontrib><creatorcontrib>Garcia-Pichel, Ferran</creatorcontrib><title>Belnapia moabensis gen. nov., sp. nov., an alphaproteobacterium from biological soil crusts in the Colorado Plateau, USA</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>School of Life Sciences, Arizona State University, Main Campus, Tempe, AZ 85287-4501, USA
Correspondence Ferran Garcia-Pichel ferran{at}asu.edu
Strain CP2C T was isolated from biological soil crusts in the Colorado Plateau, USA. The isolate was aerobic, facultatively fermentative, Gram-negative, non-motile and red-pigmented (due to the presence of carotenoids), but did not contain bacteriochlorophyll a . The strain tested positive for catalase, oxidase and urease and was negative for lysine and ornithine decarboxylases and arginine dihydrolase. The major fatty acids present were C 18 : 1 7 c and C 16 : 0 . It had a high DNA G+C content of 75 mol%. Comparisons of 16S rRNA gene sequences identified bacteriochlorophyll a -producing strains of Paracraurococcus ruber (94·9 %), Craurococcus roseus (92·2 %) and Roseococcus thiosulfatophilus (92·3 %), as well as non-bacteriochlorophyll a -producing bacteria Muricoccus roseus (94·9 %), Roseomonas gilardii (94·2 %) and Roseomonas mucosa (93·8 %), as the bacteria most closely related to strain CP2C T . Phylogenetically, CP2C T was placed roughly equidistantly from the above organisms. Based on its phylogenetic placement and morphological and physiological characteristics, strain CP2C T is assigned to a new genus in the -1 subgroup of the Proteobacteria , for which the name Belnapia gen. nov. is proposed. Strain CP2C T (=ATCC BAA-1043 T =DSM 16746 T ) is proposed as the type strain of the type species of this genus, with the name Belnapia moabensis gen. nov., sp. nov.
Abbreviations: Bchl a , bacteriochlorophyll a ; BSC, biological soil crust; SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CP2C T is AJ871428 .
A 16S rRNA gene sequence similarity matrix, a comparison of nucleotides in the 16S rRNA gene sequence between Belnapia moabensis and related species and UPGMA and maximum-parsimony phylogenetic trees are available as supplementary material in IJSEM Online.</description><subject>Alphaproteobacteria - chemistry</subject><subject>Alphaproteobacteria - classification</subject><subject>Alphaproteobacteria - isolation & purification</subject><subject>Alphaproteobacteria - physiology</subject><subject>Bacterial Proteins - biosynthesis</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>Catalase - metabolism</subject><subject>Colorado</subject><subject>Fatty Acids</subject><subject>Fermentation</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Oxidoreductases - metabolism</subject><subject>Proteobacteria</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Roseomonas</subject><subject>Roseomonas gilardii</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Soil Microbiology</subject><subject>Species Specificity</subject><subject>Systematics</subject><subject>Urease - metabolism</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAQhi0EoqVw5Ip8gVMTxo5jJ8ey4kuqBBL0bE2cya6rJA52wse_x6ULe-Q0o_Gj8at5GHsuoBTQtq_9bSqh1JXRqoAH7FworYsaKvXwXy_1GXuS0i1AHgA8ZmdCK6garc_Zzzc0zrh45FPAjubkE9_TXPI5fC8veVr-djhzHJcDLjGsFDp0K0W_TXyIYeKdD2PYe4cjT8GP3MUtrYn7ma8H4rv8GLEP_POIK-F2yW--XD1ljwYcEz071gt28-7t192H4vrT-4-7q-vCKSnXQumKjCDTwwDGUdtXxsBQKafJuF52Gjrp5NAMLTrsW1cLZUgSNrUbhOj76oK9ut-bg3_bKK128snROOJMYUvWgG6EBPNfUIIULTR1Bot70MWQUqTBLtFPGH9ZAfbOic1OLNg_Tixk_sVx8dZN1J_oo4QMvDwCmPIJh4iz8-nEGSV1LcQp4cHvDz98JJtNTT7HyPe_-7TWVthaVL8Bl0ui8w</recordid><startdate>20060101</startdate><enddate>20060101</enddate><creator>Reddy, Gundlapally S. N</creator><creator>Nagy, Moria</creator><creator>Garcia-Pichel, Ferran</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20060101</creationdate><title>Belnapia moabensis gen. nov., sp. nov., an alphaproteobacterium from biological soil crusts in the Colorado Plateau, USA</title><author>Reddy, Gundlapally S. N ; Nagy, Moria ; Garcia-Pichel, Ferran</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c422t-463e71e7d0f07ce9d3770f34c6e7cd2b60b2c2f8f9acad9c5147e2ea85cf11dd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Alphaproteobacteria - chemistry</topic><topic>Alphaproteobacteria - classification</topic><topic>Alphaproteobacteria - isolation & purification</topic><topic>Alphaproteobacteria - physiology</topic><topic>Bacterial Proteins - biosynthesis</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>Catalase - metabolism</topic><topic>Colorado</topic><topic>Fatty Acids</topic><topic>Fermentation</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Oxidoreductases - metabolism</topic><topic>Proteobacteria</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Roseomonas</topic><topic>Roseomonas gilardii</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Soil Microbiology</topic><topic>Species Specificity</topic><topic>Systematics</topic><topic>Urease - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Reddy, Gundlapally S. N</creatorcontrib><creatorcontrib>Nagy, Moria</creatorcontrib><creatorcontrib>Garcia-Pichel, Ferran</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Reddy, Gundlapally S. N</au><au>Nagy, Moria</au><au>Garcia-Pichel, Ferran</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Belnapia moabensis gen. nov., sp. nov., an alphaproteobacterium from biological soil crusts in the Colorado Plateau, USA</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2006-01-01</date><risdate>2006</risdate><volume>56</volume><issue>1</issue><spage>51</spage><epage>58</epage><pages>51-58</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>School of Life Sciences, Arizona State University, Main Campus, Tempe, AZ 85287-4501, USA
Correspondence Ferran Garcia-Pichel ferran{at}asu.edu
Strain CP2C T was isolated from biological soil crusts in the Colorado Plateau, USA. The isolate was aerobic, facultatively fermentative, Gram-negative, non-motile and red-pigmented (due to the presence of carotenoids), but did not contain bacteriochlorophyll a . The strain tested positive for catalase, oxidase and urease and was negative for lysine and ornithine decarboxylases and arginine dihydrolase. The major fatty acids present were C 18 : 1 7 c and C 16 : 0 . It had a high DNA G+C content of 75 mol%. Comparisons of 16S rRNA gene sequences identified bacteriochlorophyll a -producing strains of Paracraurococcus ruber (94·9 %), Craurococcus roseus (92·2 %) and Roseococcus thiosulfatophilus (92·3 %), as well as non-bacteriochlorophyll a -producing bacteria Muricoccus roseus (94·9 %), Roseomonas gilardii (94·2 %) and Roseomonas mucosa (93·8 %), as the bacteria most closely related to strain CP2C T . Phylogenetically, CP2C T was placed roughly equidistantly from the above organisms. Based on its phylogenetic placement and morphological and physiological characteristics, strain CP2C T is assigned to a new genus in the -1 subgroup of the Proteobacteria , for which the name Belnapia gen. nov. is proposed. Strain CP2C T (=ATCC BAA-1043 T =DSM 16746 T ) is proposed as the type strain of the type species of this genus, with the name Belnapia moabensis gen. nov., sp. nov.
Abbreviations: Bchl a , bacteriochlorophyll a ; BSC, biological soil crust; SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CP2C T is AJ871428 .
A 16S rRNA gene sequence similarity matrix, a comparison of nucleotides in the 16S rRNA gene sequence between Belnapia moabensis and related species and UPGMA and maximum-parsimony phylogenetic trees are available as supplementary material in IJSEM Online.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>16403866</pmid><doi>10.1099/ijs.0.63764-0</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1466-5026 |
| ispartof | International journal of systematic and evolutionary microbiology, 2006-01, Vol.56 (1), p.51-58 |
| issn | 1466-5026 1466-5034 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_70681207 |
| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Alphaproteobacteria - chemistry Alphaproteobacteria - classification Alphaproteobacteria - isolation & purification Alphaproteobacteria - physiology Bacterial Proteins - biosynthesis Bacteriology Base Composition Biological and medical sciences Catalase - metabolism Colorado Fatty Acids Fermentation Fundamental and applied biological sciences. Psychology Microbiology Molecular Sequence Data Oxidoreductases - metabolism Proteobacteria RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Roseomonas Roseomonas gilardii Sequence Homology, Nucleic Acid Soil Microbiology Species Specificity Systematics Urease - metabolism |
| title | Belnapia moabensis gen. nov., sp. nov., an alphaproteobacterium from biological soil crusts in the Colorado Plateau, USA |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-20T12%3A45%3A54IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Belnapia%20moabensis%20gen.%20nov.,%20sp.%20nov.,%20an%20alphaproteobacterium%20from%20biological%20soil%20crusts%20in%20the%20Colorado%20Plateau,%20USA&rft.jtitle=International%20journal%20of%20systematic%20and%20evolutionary%20microbiology&rft.au=Reddy,%20Gundlapally%20S.%20N&rft.date=2006-01-01&rft.volume=56&rft.issue=1&rft.spage=51&rft.epage=58&rft.pages=51-58&rft.issn=1466-5026&rft.eissn=1466-5034&rft_id=info:doi/10.1099/ijs.0.63764-0&rft_dat=%3Cproquest_cross%3E70681207%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=20219085&rft_id=info:pmid/16403866&rfr_iscdi=true |