A phylogeny of the “evil tribe” (Vernonieae: Compositae) reveals Old/New World long distance dispersal: Support from separate and combined congruent datasets ( trnL-F, ndhF, ITS)
The Vernonieae is one of the major tribes of the largest family of flowering plants, the sunflower family (Compositae or Asteraceae), with ca. 25,000 species. While the family’s basal members (the Barnadesioideae) are found in South America, the tribe Vernonieae originated in the area of southern Af...
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description | The Vernonieae is one of the major tribes of the largest family of flowering plants, the sunflower family (Compositae or Asteraceae), with ca. 25,000 species. While the family’s basal members (the Barnadesioideae) are found in South America, the tribe Vernonieae originated in the area of southern Africa/Madagascar. Its sister tribe, the Liabeae, is New World, however. This is the only such New/Old World sister tribe pairing anywhere in the family. The Vernonieae is now found on islands and continents worldwide and includes more than 1500 taxa. The Vernonieae has been called the “evil tribe” because overlapping character states make taxonomic delimitations difficult at all levels from the species to the subtribe for the majority of taxa. Juxtaposed with these difficult-to-separate entities are monotypic genera with highly distinctive morphologies and no obvious affinities to any other members of the tribe. The taxonomic frustration generated by these contrary circumstances has resulted in a lack of any phylogeny for the tribe until now. A combined approach using DNA sequence data from two chloroplast regions, the
ndhF gene and the noncoding spacer
trnL-F, and from the nuclear rDNA ITS region for 90 taxa from throughout the world was used to reconstruct the evolutionary history of the tribe. The data were analyzed separately and in combination using maximum parsimony (MP), minimum evolution neighbor-joining (NJ), and Bayesian analysis, the latter producing the best resolved and most strongly supported tree. In general, the phylogeny shows Old World taxa to be basal and New World taxa to be derived, but this is not always the case. Old and New World species are found together in two separate and only distantly related clades. This is best explained by long-distance dispersal with a minimum of two trans-oceanic exchanges. Meso/Central America has had an important role in ancient dispersals between the Old and New World and more recent movements from South to North America in the New World. |
doi_str_mv | 10.1016/j.ympev.2006.12.024 |
format | Article |
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ndhF gene and the noncoding spacer
trnL-F, and from the nuclear rDNA ITS region for 90 taxa from throughout the world was used to reconstruct the evolutionary history of the tribe. The data were analyzed separately and in combination using maximum parsimony (MP), minimum evolution neighbor-joining (NJ), and Bayesian analysis, the latter producing the best resolved and most strongly supported tree. In general, the phylogeny shows Old World taxa to be basal and New World taxa to be derived, but this is not always the case. Old and New World species are found together in two separate and only distantly related clades. This is best explained by long-distance dispersal with a minimum of two trans-oceanic exchanges. Meso/Central America has had an important role in ancient dispersals between the Old and New World and more recent movements from South to North America in the New World.</description><identifier>ISSN: 1055-7903</identifier><identifier>EISSN: 1095-9513</identifier><identifier>DOI: 10.1016/j.ympev.2006.12.024</identifier><identifier>PMID: 17292633</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Asteraceae ; Asteraceae - classification ; Asteraceae - genetics ; Central America ; Compositae ; Congruence ; DNA, Chloroplast - genetics ; Evolution, Molecular ; Genes, Plant - genetics ; Helianthus ; ITS ; Mesoamerica: Central America ; Molecular Sequence Data ; ndhF ; Old and New World ; Phylogeny ; Plant Proteins - genetics ; Sequence Analysis, DNA ; trnL-F ; Vernonia ; Vernonieae</subject><ispartof>Molecular phylogenetics and evolution, 2007-07, Vol.44 (1), p.89-103</ispartof><rights>2007 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c388t-70296ee2761e1456239156e512ee457d79147239b12534d388450ab3d665ca333</citedby><cites>FETCH-LOGICAL-c388t-70296ee2761e1456239156e512ee457d79147239b12534d388450ab3d665ca333</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ympev.2006.12.024$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17292633$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Keeley, Sterling C.</creatorcontrib><creatorcontrib>Forsman, Zac H.</creatorcontrib><creatorcontrib>Chan, Raymund</creatorcontrib><title>A phylogeny of the “evil tribe” (Vernonieae: Compositae) reveals Old/New World long distance dispersal: Support from separate and combined congruent datasets ( trnL-F, ndhF, ITS)</title><title>Molecular phylogenetics and evolution</title><addtitle>Mol Phylogenet Evol</addtitle><description>The Vernonieae is one of the major tribes of the largest family of flowering plants, the sunflower family (Compositae or Asteraceae), with ca. 25,000 species. While the family’s basal members (the Barnadesioideae) are found in South America, the tribe Vernonieae originated in the area of southern Africa/Madagascar. Its sister tribe, the Liabeae, is New World, however. This is the only such New/Old World sister tribe pairing anywhere in the family. The Vernonieae is now found on islands and continents worldwide and includes more than 1500 taxa. The Vernonieae has been called the “evil tribe” because overlapping character states make taxonomic delimitations difficult at all levels from the species to the subtribe for the majority of taxa. Juxtaposed with these difficult-to-separate entities are monotypic genera with highly distinctive morphologies and no obvious affinities to any other members of the tribe. The taxonomic frustration generated by these contrary circumstances has resulted in a lack of any phylogeny for the tribe until now. A combined approach using DNA sequence data from two chloroplast regions, the
ndhF gene and the noncoding spacer
trnL-F, and from the nuclear rDNA ITS region for 90 taxa from throughout the world was used to reconstruct the evolutionary history of the tribe. The data were analyzed separately and in combination using maximum parsimony (MP), minimum evolution neighbor-joining (NJ), and Bayesian analysis, the latter producing the best resolved and most strongly supported tree. In general, the phylogeny shows Old World taxa to be basal and New World taxa to be derived, but this is not always the case. Old and New World species are found together in two separate and only distantly related clades. This is best explained by long-distance dispersal with a minimum of two trans-oceanic exchanges. Meso/Central America has had an important role in ancient dispersals between the Old and New World and more recent movements from South to North America in the New World.</description><subject>Asteraceae</subject><subject>Asteraceae - classification</subject><subject>Asteraceae - genetics</subject><subject>Central America</subject><subject>Compositae</subject><subject>Congruence</subject><subject>DNA, Chloroplast - genetics</subject><subject>Evolution, Molecular</subject><subject>Genes, Plant - genetics</subject><subject>Helianthus</subject><subject>ITS</subject><subject>Mesoamerica: Central America</subject><subject>Molecular Sequence Data</subject><subject>ndhF</subject><subject>Old and New World</subject><subject>Phylogeny</subject><subject>Plant Proteins - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>trnL-F</subject><subject>Vernonia</subject><subject>Vernonieae</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1uEzEUhUcIREvhCZCQV6iVmNQ_Y7tTiUUVUagU0UULLC3P-CZxNGNPbU9Qdn2Q9jV4oD4JDonEDjb2kXXOvdb5iuItwROCiThdTTb9AOsJxVhMCJ1gWj0rDgmueVlzwp5vNeelrDE7KF7FuMKYEF7zl8UBkbSmgrHD4tcFGpabzi_AbZCfo7QE9HT_AGvboRRsA0_3j-j4OwTnnQUN52jq-8FHmzScoABr0F1E1505_Qo_0Q8fOoM67xbI2Ji0a2ErBghRd-foZhwGHxKaB9-jCIMOOgHSzqDW9411sBVuEUZwCRmddIQU0XH-iJuVlx-QM8t8Xt3enLwuXszzYnizv4-Kb5efbqdfytn156vpxaxs2dlZKiWmtQCgUhAgFReU1YQL4IQCVFwaWZNK5seGUM4qkzMVx7phRgjeasbYUfF-N3cI_m6EmFRvYwtdpx34MSqZG5ZE8v8aSS0wl1hkI9sZ2-BjDDBXQ7C9DhtFsNpyVSv1h6vaclWEqsw1p97tx49ND-ZvZg8yGz7uDJDbWFsIKrYWcv_GBmiTMt7-c8Fv_tC2qQ</recordid><startdate>20070701</startdate><enddate>20070701</enddate><creator>Keeley, Sterling C.</creator><creator>Forsman, Zac H.</creator><creator>Chan, Raymund</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20070701</creationdate><title>A phylogeny of the “evil tribe” (Vernonieae: Compositae) reveals Old/New World long distance dispersal: Support from separate and combined congruent datasets ( trnL-F, ndhF, ITS)</title><author>Keeley, Sterling C. ; Forsman, Zac H. ; Chan, Raymund</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c388t-70296ee2761e1456239156e512ee457d79147239b12534d388450ab3d665ca333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Asteraceae</topic><topic>Asteraceae - classification</topic><topic>Asteraceae - genetics</topic><topic>Central America</topic><topic>Compositae</topic><topic>Congruence</topic><topic>DNA, Chloroplast - genetics</topic><topic>Evolution, Molecular</topic><topic>Genes, Plant - genetics</topic><topic>Helianthus</topic><topic>ITS</topic><topic>Mesoamerica: Central America</topic><topic>Molecular Sequence Data</topic><topic>ndhF</topic><topic>Old and New World</topic><topic>Phylogeny</topic><topic>Plant Proteins - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>trnL-F</topic><topic>Vernonia</topic><topic>Vernonieae</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Keeley, Sterling C.</creatorcontrib><creatorcontrib>Forsman, Zac H.</creatorcontrib><creatorcontrib>Chan, Raymund</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Keeley, Sterling C.</au><au>Forsman, Zac H.</au><au>Chan, Raymund</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A phylogeny of the “evil tribe” (Vernonieae: Compositae) reveals Old/New World long distance dispersal: Support from separate and combined congruent datasets ( trnL-F, ndhF, ITS)</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>2007-07-01</date><risdate>2007</risdate><volume>44</volume><issue>1</issue><spage>89</spage><epage>103</epage><pages>89-103</pages><issn>1055-7903</issn><eissn>1095-9513</eissn><abstract>The Vernonieae is one of the major tribes of the largest family of flowering plants, the sunflower family (Compositae or Asteraceae), with ca. 25,000 species. While the family’s basal members (the Barnadesioideae) are found in South America, the tribe Vernonieae originated in the area of southern Africa/Madagascar. Its sister tribe, the Liabeae, is New World, however. This is the only such New/Old World sister tribe pairing anywhere in the family. The Vernonieae is now found on islands and continents worldwide and includes more than 1500 taxa. The Vernonieae has been called the “evil tribe” because overlapping character states make taxonomic delimitations difficult at all levels from the species to the subtribe for the majority of taxa. Juxtaposed with these difficult-to-separate entities are monotypic genera with highly distinctive morphologies and no obvious affinities to any other members of the tribe. The taxonomic frustration generated by these contrary circumstances has resulted in a lack of any phylogeny for the tribe until now. A combined approach using DNA sequence data from two chloroplast regions, the
ndhF gene and the noncoding spacer
trnL-F, and from the nuclear rDNA ITS region for 90 taxa from throughout the world was used to reconstruct the evolutionary history of the tribe. The data were analyzed separately and in combination using maximum parsimony (MP), minimum evolution neighbor-joining (NJ), and Bayesian analysis, the latter producing the best resolved and most strongly supported tree. In general, the phylogeny shows Old World taxa to be basal and New World taxa to be derived, but this is not always the case. Old and New World species are found together in two separate and only distantly related clades. This is best explained by long-distance dispersal with a minimum of two trans-oceanic exchanges. Meso/Central America has had an important role in ancient dispersals between the Old and New World and more recent movements from South to North America in the New World.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>17292633</pmid><doi>10.1016/j.ympev.2006.12.024</doi><tpages>15</tpages></addata></record> |
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subjects | Asteraceae Asteraceae - classification Asteraceae - genetics Central America Compositae Congruence DNA, Chloroplast - genetics Evolution, Molecular Genes, Plant - genetics Helianthus ITS Mesoamerica: Central America Molecular Sequence Data ndhF Old and New World Phylogeny Plant Proteins - genetics Sequence Analysis, DNA trnL-F Vernonia Vernonieae |
title | A phylogeny of the “evil tribe” (Vernonieae: Compositae) reveals Old/New World long distance dispersal: Support from separate and combined congruent datasets ( trnL-F, ndhF, ITS) |
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