Intracellular fluxes in a recombinant xylose-utilizing Saccharomyces cerevisiae cultivated anaerobically at different dilution rates and feed concentrations
A metabolic flux model was constructed for the yeast Saccharomyces cerevisiae comprising the most important reactions during anaerobic metabolism of xylose and glucose. The model was used to calculate the intracellular fluxes in a recombinant, xylose‐utilizing strain of S. cerevisiae (TMB 3001) grow...
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Veröffentlicht in: | Biotechnology and bioengineering 2001-02, Vol.72 (3), p.289-296 |
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description | A metabolic flux model was constructed for the yeast Saccharomyces cerevisiae comprising the most important reactions during anaerobic metabolism of xylose and glucose. The model was used to calculate the intracellular fluxes in a recombinant, xylose‐utilizing strain of S. cerevisiae (TMB 3001) grown anaerobically in a defined medium at dilution rates of 0.03, 0.06, and 0.18 h−1. The feed concentration was varied from 0 g/L xylose and 20 g/L glucose to a mixture of 15 g/L xylose and 5 g/L glucose, so that the total concentration of carbon source was kept at 20 g/L. The specific uptake of xylose increased with the xylose concentration in the feed and with increasing dilution rate. The excreted xylitol was less than half of the xylose consumed. With increasing xylose concentration in the feed, the fluxes in the pentose phosphate pathway increased, whereas the flux through glycolysis decreased. Under all cultivation conditions, nicotinamide adenine dinucleotide (NADH) was the preferred cofactor for xylose reductase. The model showed that the flux through the reaction from ribulose 5‐phosphate to xylulose 5‐phosphate was very low under all cultivation conditions. © 2001 John Wiley & Sons, Inc. Biotechnol Bioeng 72: 289–296, 2001. |
doi_str_mv | 10.1002/1097-0290(20010205)72:3<289::AID-BIT5>3.0.CO;2-9 |
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Fredrik ; Eliasson, Anna ; Hahn-Hägerdal, Bärbel</creator><creatorcontrib>Wahlbom, C. Fredrik ; Eliasson, Anna ; Hahn-Hägerdal, Bärbel</creatorcontrib><description>A metabolic flux model was constructed for the yeast Saccharomyces cerevisiae comprising the most important reactions during anaerobic metabolism of xylose and glucose. The model was used to calculate the intracellular fluxes in a recombinant, xylose‐utilizing strain of S. cerevisiae (TMB 3001) grown anaerobically in a defined medium at dilution rates of 0.03, 0.06, and 0.18 h−1. The feed concentration was varied from 0 g/L xylose and 20 g/L glucose to a mixture of 15 g/L xylose and 5 g/L glucose, so that the total concentration of carbon source was kept at 20 g/L. The specific uptake of xylose increased with the xylose concentration in the feed and with increasing dilution rate. The excreted xylitol was less than half of the xylose consumed. With increasing xylose concentration in the feed, the fluxes in the pentose phosphate pathway increased, whereas the flux through glycolysis decreased. Under all cultivation conditions, nicotinamide adenine dinucleotide (NADH) was the preferred cofactor for xylose reductase. The model showed that the flux through the reaction from ribulose 5‐phosphate to xylulose 5‐phosphate was very low under all cultivation conditions. © 2001 John Wiley & Sons, Inc. Biotechnol Bioeng 72: 289–296, 2001.</description><identifier>ISSN: 0006-3592</identifier><identifier>EISSN: 1097-0290</identifier><identifier>DOI: 10.1002/1097-0290(20010205)72:3<289::AID-BIT5>3.0.CO;2-9</identifier><identifier>PMID: 11135198</identifier><identifier>CODEN: BIBIAU</identifier><language>eng</language><publisher>New York: John Wiley & Sons, Inc</publisher><subject>Aldehyde Reductase - metabolism ; Anaerobiosis ; Biological and medical sciences ; Biology of microorganisms of confirmed or potential industrial interest ; Biomass ; Biotechnology ; Carbon ; Citric Acid Cycle ; continuous cultivation ; Culture Media - chemistry ; Ethanol - metabolism ; Fermentation ; Fundamental and applied biological sciences. Psychology ; Glucose ; Glucose - metabolism ; metabolic flux analysis ; Metabolism ; Mission oriented research ; Models, Biological ; NAD - metabolism ; NADH ; NADH utilization of xylose reductase ; pentose phosphate ; Pentose Phosphate Pathway ; Phosphates ; Physiology and metabolism ; Plant cell culture ; Pyruvic Acid - metabolism ; Saccharomyces cerevisiae ; Saccharomyces cerevisiae - cytology ; Saccharomyces cerevisiae - metabolism ; xylitol ; Xylose ; Xylose - metabolism ; xylose fermentation</subject><ispartof>Biotechnology and bioengineering, 2001-02, Vol.72 (3), p.289-296</ispartof><rights>Copyright © 2001 John Wiley & Sons, Inc.</rights><rights>2001 INIST-CNRS</rights><rights>Copyright 2001 John Wiley & Sons, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2F1097-0290%2820010205%2972%3A3%3C289%3A%3AAID-BIT5%3E3.0.CO%3B2-9$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2F1097-0290%2820010205%2972%3A3%3C289%3A%3AAID-BIT5%3E3.0.CO%3B2-9$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27903,27904,45553,45554</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=879191$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11135198$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wahlbom, C. Fredrik</creatorcontrib><creatorcontrib>Eliasson, Anna</creatorcontrib><creatorcontrib>Hahn-Hägerdal, Bärbel</creatorcontrib><title>Intracellular fluxes in a recombinant xylose-utilizing Saccharomyces cerevisiae cultivated anaerobically at different dilution rates and feed concentrations</title><title>Biotechnology and bioengineering</title><addtitle>Biotechnol. Bioeng</addtitle><description>A metabolic flux model was constructed for the yeast Saccharomyces cerevisiae comprising the most important reactions during anaerobic metabolism of xylose and glucose. The model was used to calculate the intracellular fluxes in a recombinant, xylose‐utilizing strain of S. cerevisiae (TMB 3001) grown anaerobically in a defined medium at dilution rates of 0.03, 0.06, and 0.18 h−1. The feed concentration was varied from 0 g/L xylose and 20 g/L glucose to a mixture of 15 g/L xylose and 5 g/L glucose, so that the total concentration of carbon source was kept at 20 g/L. The specific uptake of xylose increased with the xylose concentration in the feed and with increasing dilution rate. The excreted xylitol was less than half of the xylose consumed. With increasing xylose concentration in the feed, the fluxes in the pentose phosphate pathway increased, whereas the flux through glycolysis decreased. Under all cultivation conditions, nicotinamide adenine dinucleotide (NADH) was the preferred cofactor for xylose reductase. The model showed that the flux through the reaction from ribulose 5‐phosphate to xylulose 5‐phosphate was very low under all cultivation conditions. © 2001 John Wiley & Sons, Inc. Biotechnol Bioeng 72: 289–296, 2001.</description><subject>Aldehyde Reductase - metabolism</subject><subject>Anaerobiosis</subject><subject>Biological and medical sciences</subject><subject>Biology of microorganisms of confirmed or potential industrial interest</subject><subject>Biomass</subject><subject>Biotechnology</subject><subject>Carbon</subject><subject>Citric Acid Cycle</subject><subject>continuous cultivation</subject><subject>Culture Media - chemistry</subject><subject>Ethanol - metabolism</subject><subject>Fermentation</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Glucose</subject><subject>Glucose - metabolism</subject><subject>metabolic flux analysis</subject><subject>Metabolism</subject><subject>Mission oriented research</subject><subject>Models, Biological</subject><subject>NAD - metabolism</subject><subject>NADH</subject><subject>NADH utilization of xylose reductase</subject><subject>pentose phosphate</subject><subject>Pentose Phosphate Pathway</subject><subject>Phosphates</subject><subject>Physiology and metabolism</subject><subject>Plant cell culture</subject><subject>Pyruvic Acid - metabolism</subject><subject>Saccharomyces cerevisiae</subject><subject>Saccharomyces cerevisiae - cytology</subject><subject>Saccharomyces cerevisiae - metabolism</subject><subject>xylitol</subject><subject>Xylose</subject><subject>Xylose - metabolism</subject><subject>xylose fermentation</subject><issn>0006-3592</issn><issn>1097-0290</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFktFu0zAUhiMEYmXwCsgSEoKLlGM7juOCkLbARqVCBQxxabmOMwyuM-xktDwLD4tDu3K5K_vI3_l1dPxlWYVhigHICwyC50AEPCMAGAiw55zM6CtSidnsZP4mP51fsNd0CtN6-ZLk4k42ObTczSYAUOaUCXKUPYjxeyp5VZb3syOMMWVYVJPsz9z3QWnj3OBUQK0bNiYi65FCwehuvbJe-R5ttq6LJh966-xv6y_RZ6X1NxW69VYnXptgrm20yiA9uN5eq940SHllQreyWjm3RapHjW3bRPrx5lJW51FIZExkg1qTWnTntRknGh_jw-xeq1w0j_bncfbl7O1F_S5fLM_n9ckivywKznJesEpj0fC2AVAlX2lSqrZSDYWGUVLqlmOquQFDeEWLpmhFxTgFJoq0ZVPS4-zpLvcqdD8HE3u5tnHcifKmG6LkwBhUhbgVJLgoS14Wt4K4wowRMoKP9-CwWptGXgW7VmErb34oAU_2gIppkW1QXtt44CousMCJ-rijfllntv9TQI4eyVEKOUohbzySnEgqk0cyaSRHjVIJsl5KIsW_OmXmu0wbe7M5ZKrwQ5accia_fjiXi9Oz-hMT72VN_wKTR9A7</recordid><startdate>20010205</startdate><enddate>20010205</enddate><creator>Wahlbom, C. Fredrik</creator><creator>Eliasson, Anna</creator><creator>Hahn-Hägerdal, Bärbel</creator><general>John Wiley & Sons, Inc</general><general>Wiley</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7QO</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20010205</creationdate><title>Intracellular fluxes in a recombinant xylose-utilizing Saccharomyces cerevisiae cultivated anaerobically at different dilution rates and feed concentrations</title><author>Wahlbom, C. Fredrik ; Eliasson, Anna ; Hahn-Hägerdal, Bärbel</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-g4475-7458c19d7fd00a67bc26af8ad30d5326cf713c7e0e27834d4f985730594100e63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Aldehyde Reductase - metabolism</topic><topic>Anaerobiosis</topic><topic>Biological and medical sciences</topic><topic>Biology of microorganisms of confirmed or potential industrial interest</topic><topic>Biomass</topic><topic>Biotechnology</topic><topic>Carbon</topic><topic>Citric Acid Cycle</topic><topic>continuous cultivation</topic><topic>Culture Media - chemistry</topic><topic>Ethanol - metabolism</topic><topic>Fermentation</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Glucose</topic><topic>Glucose - metabolism</topic><topic>metabolic flux analysis</topic><topic>Metabolism</topic><topic>Mission oriented research</topic><topic>Models, Biological</topic><topic>NAD - metabolism</topic><topic>NADH</topic><topic>NADH utilization of xylose reductase</topic><topic>pentose phosphate</topic><topic>Pentose Phosphate Pathway</topic><topic>Phosphates</topic><topic>Physiology and metabolism</topic><topic>Plant cell culture</topic><topic>Pyruvic Acid - metabolism</topic><topic>Saccharomyces cerevisiae</topic><topic>Saccharomyces cerevisiae - cytology</topic><topic>Saccharomyces cerevisiae - metabolism</topic><topic>xylitol</topic><topic>Xylose</topic><topic>Xylose - metabolism</topic><topic>xylose fermentation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wahlbom, C. Fredrik</creatorcontrib><creatorcontrib>Eliasson, Anna</creatorcontrib><creatorcontrib>Hahn-Hägerdal, Bärbel</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biotechnology and bioengineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wahlbom, C. Fredrik</au><au>Eliasson, Anna</au><au>Hahn-Hägerdal, Bärbel</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Intracellular fluxes in a recombinant xylose-utilizing Saccharomyces cerevisiae cultivated anaerobically at different dilution rates and feed concentrations</atitle><jtitle>Biotechnology and bioengineering</jtitle><addtitle>Biotechnol. Bioeng</addtitle><date>2001-02-05</date><risdate>2001</risdate><volume>72</volume><issue>3</issue><spage>289</spage><epage>296</epage><pages>289-296</pages><issn>0006-3592</issn><eissn>1097-0290</eissn><coden>BIBIAU</coden><abstract>A metabolic flux model was constructed for the yeast Saccharomyces cerevisiae comprising the most important reactions during anaerobic metabolism of xylose and glucose. The model was used to calculate the intracellular fluxes in a recombinant, xylose‐utilizing strain of S. cerevisiae (TMB 3001) grown anaerobically in a defined medium at dilution rates of 0.03, 0.06, and 0.18 h−1. The feed concentration was varied from 0 g/L xylose and 20 g/L glucose to a mixture of 15 g/L xylose and 5 g/L glucose, so that the total concentration of carbon source was kept at 20 g/L. The specific uptake of xylose increased with the xylose concentration in the feed and with increasing dilution rate. The excreted xylitol was less than half of the xylose consumed. With increasing xylose concentration in the feed, the fluxes in the pentose phosphate pathway increased, whereas the flux through glycolysis decreased. Under all cultivation conditions, nicotinamide adenine dinucleotide (NADH) was the preferred cofactor for xylose reductase. The model showed that the flux through the reaction from ribulose 5‐phosphate to xylulose 5‐phosphate was very low under all cultivation conditions. © 2001 John Wiley & Sons, Inc. Biotechnol Bioeng 72: 289–296, 2001.</abstract><cop>New York</cop><pub>John Wiley & Sons, Inc</pub><pmid>11135198</pmid><doi>10.1002/1097-0290(20010205)72:3<289::AID-BIT5>3.0.CO;2-9</doi><tpages>8</tpages></addata></record> |
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subjects | Aldehyde Reductase - metabolism Anaerobiosis Biological and medical sciences Biology of microorganisms of confirmed or potential industrial interest Biomass Biotechnology Carbon Citric Acid Cycle continuous cultivation Culture Media - chemistry Ethanol - metabolism Fermentation Fundamental and applied biological sciences. Psychology Glucose Glucose - metabolism metabolic flux analysis Metabolism Mission oriented research Models, Biological NAD - metabolism NADH NADH utilization of xylose reductase pentose phosphate Pentose Phosphate Pathway Phosphates Physiology and metabolism Plant cell culture Pyruvic Acid - metabolism Saccharomyces cerevisiae Saccharomyces cerevisiae - cytology Saccharomyces cerevisiae - metabolism xylitol Xylose Xylose - metabolism xylose fermentation |
title | Intracellular fluxes in a recombinant xylose-utilizing Saccharomyces cerevisiae cultivated anaerobically at different dilution rates and feed concentrations |
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