Gepard: a rapid and sensitive tool for creating dotplots on genome scale

Gepard provides a user-friendly, interactive application for the quick creation of dotplots. It utilizes suffix arrays to reduce the time complexity of dotplot calculation to Θ(m*log n). A client-server mode, which is a novel feature for dotplot creation software, allows the user to calculate dotplo...

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Veröffentlicht in:	Bioinformatics 2007-04, Vol.23 (8), p.1026-1028
Hauptverfasser:	Krumsiek, Jan, Arnold, Roland, Rattei, Thomas
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Biological and medical sciences Chromosome Mapping - methods Computer Graphics Fundamental and applied biological sciences. Psychology General aspects Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Sensitivity and Specificity Software User-Computer Interface
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