Identification of cis-regulatory elements and trans-acting proteins of the rat carbohydrate response element binding protein gene
Carbohydrate response element binding protein (ChREBP) is a transcription factor that activates liver glycolytic and lipogenetic enzyme genes in response to high carbohydrate diet. Here we report the transcriptional regulatory mechanisms for the rat ChREBP gene. Firstly, we determined the transcript...
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Veröffentlicht in: | Archives of biochemistry and biophysics 2007-05, Vol.461 (1), p.113-122 |
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creator | Satoh, Shin-ichi Masatoshi, Sakie Shou, Zhangfei Yamamoto, Taichi Ishigure, Tatsuya Semii, Atsushi Yamada, Kazuya Noguchi, Tamio |
description | Carbohydrate response element binding protein (ChREBP) is a transcription factor that activates liver glycolytic and lipogenetic enzyme genes in response to high carbohydrate diet. Here we report the transcriptional regulatory mechanisms for the rat
ChREBP gene. Firstly, we determined the transcription initiation site and the nucleotide sequences of the rat
ChREBP promoter region encompassing approximately 900
bp from the ATG initiation codon. Reporter gene assays demonstrated that the major positive regulatory region exists in the nucleotide sequence between −163 and −32 of the
ChREBP gene. This region contains a cluster of putative transcription factor binding elements that consist of two specificity protein 1 (Sp1) binding sites (−66 to −50 and −93 to −78), a sterol regulatory element (−101 to −110), and two nuclear factor-Y (NF-Y) binding sites (−23 to −19 and −131 to −127). Mutations introduced into these sites caused marked reduction of
ChREBP promoter activities. Functional synergisms were observed between Sp1/NF-Y and Sp1/sterol regulatory element-binding protein. Additionally, electrophoretic mobility shift assays and chromatin immunoprecipitation assays demonstrated that these factors bound to these elements. Thus, we conclude that functional synergisms between these transcription factors are critical for
ChREBP gene transcription. |
doi_str_mv | 10.1016/j.abb.2007.02.028 |
format | Article |
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ChREBP gene. Firstly, we determined the transcription initiation site and the nucleotide sequences of the rat
ChREBP promoter region encompassing approximately 900
bp from the ATG initiation codon. Reporter gene assays demonstrated that the major positive regulatory region exists in the nucleotide sequence between −163 and −32 of the
ChREBP gene. This region contains a cluster of putative transcription factor binding elements that consist of two specificity protein 1 (Sp1) binding sites (−66 to −50 and −93 to −78), a sterol regulatory element (−101 to −110), and two nuclear factor-Y (NF-Y) binding sites (−23 to −19 and −131 to −127). Mutations introduced into these sites caused marked reduction of
ChREBP promoter activities. Functional synergisms were observed between Sp1/NF-Y and Sp1/sterol regulatory element-binding protein. Additionally, electrophoretic mobility shift assays and chromatin immunoprecipitation assays demonstrated that these factors bound to these elements. Thus, we conclude that functional synergisms between these transcription factors are critical for
ChREBP gene transcription.</description><identifier>ISSN: 0003-9861</identifier><identifier>EISSN: 1096-0384</identifier><identifier>DOI: 10.1016/j.abb.2007.02.028</identifier><identifier>PMID: 17418800</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; Base Sequence ; Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - biosynthesis ; Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics ; CCAAT-Binding Factor - genetics ; Cell Line, Tumor ; Cells, Cultured ; Cercopithecus aethiops ; ChREBP ; COS Cells ; HeLa Cells ; Humans ; Male ; Molecular Sequence Data ; Multigene Family ; NF-Y ; Promoter Regions, Genetic ; Protein Binding - genetics ; Rats ; Rats, Sprague-Dawley ; Regulatory Elements, Transcriptional - genetics ; Sp1 ; Sp1 Transcription Factor - genetics ; SREBP ; Trans-Activators - genetics ; Trans-Activators - physiology ; Transcription ; Transcription Initiation Site - physiology</subject><ispartof>Archives of biochemistry and biophysics, 2007-05, Vol.461 (1), p.113-122</ispartof><rights>2007 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c351t-dc786919ee6d6fbae22d4d753e82fcd32a591796192b46994a2a688b7c45ba2b3</citedby><cites>FETCH-LOGICAL-c351t-dc786919ee6d6fbae22d4d753e82fcd32a591796192b46994a2a688b7c45ba2b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.abb.2007.02.028$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27928,27929,45999</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17418800$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Satoh, Shin-ichi</creatorcontrib><creatorcontrib>Masatoshi, Sakie</creatorcontrib><creatorcontrib>Shou, Zhangfei</creatorcontrib><creatorcontrib>Yamamoto, Taichi</creatorcontrib><creatorcontrib>Ishigure, Tatsuya</creatorcontrib><creatorcontrib>Semii, Atsushi</creatorcontrib><creatorcontrib>Yamada, Kazuya</creatorcontrib><creatorcontrib>Noguchi, Tamio</creatorcontrib><title>Identification of cis-regulatory elements and trans-acting proteins of the rat carbohydrate response element binding protein gene</title><title>Archives of biochemistry and biophysics</title><addtitle>Arch Biochem Biophys</addtitle><description>Carbohydrate response element binding protein (ChREBP) is a transcription factor that activates liver glycolytic and lipogenetic enzyme genes in response to high carbohydrate diet. Here we report the transcriptional regulatory mechanisms for the rat
ChREBP gene. Firstly, we determined the transcription initiation site and the nucleotide sequences of the rat
ChREBP promoter region encompassing approximately 900
bp from the ATG initiation codon. Reporter gene assays demonstrated that the major positive regulatory region exists in the nucleotide sequence between −163 and −32 of the
ChREBP gene. This region contains a cluster of putative transcription factor binding elements that consist of two specificity protein 1 (Sp1) binding sites (−66 to −50 and −93 to −78), a sterol regulatory element (−101 to −110), and two nuclear factor-Y (NF-Y) binding sites (−23 to −19 and −131 to −127). Mutations introduced into these sites caused marked reduction of
ChREBP promoter activities. Functional synergisms were observed between Sp1/NF-Y and Sp1/sterol regulatory element-binding protein. Additionally, electrophoretic mobility shift assays and chromatin immunoprecipitation assays demonstrated that these factors bound to these elements. Thus, we conclude that functional synergisms between these transcription factors are critical for
ChREBP gene transcription.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - biosynthesis</subject><subject>Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics</subject><subject>CCAAT-Binding Factor - genetics</subject><subject>Cell Line, Tumor</subject><subject>Cells, Cultured</subject><subject>Cercopithecus aethiops</subject><subject>ChREBP</subject><subject>COS Cells</subject><subject>HeLa Cells</subject><subject>Humans</subject><subject>Male</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family</subject><subject>NF-Y</subject><subject>Promoter Regions, Genetic</subject><subject>Protein Binding - genetics</subject><subject>Rats</subject><subject>Rats, Sprague-Dawley</subject><subject>Regulatory Elements, Transcriptional - genetics</subject><subject>Sp1</subject><subject>Sp1 Transcription Factor - genetics</subject><subject>SREBP</subject><subject>Trans-Activators - genetics</subject><subject>Trans-Activators - physiology</subject><subject>Transcription</subject><subject>Transcription Initiation Site - physiology</subject><issn>0003-9861</issn><issn>1096-0384</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE2rUzEQhoMo3nr1B7iRrNydOslJcxJcycWPCxfc6DrkY05vymlSk1To0n9uSiu6EgZmGJ73HeYl5DWDNQMm3-3W1rk1B5jWwHupJ2TFQMsBRiWekhUAjINWkt2QF7XuABgTkj8nN2wSTCmAFfl1HzC1OEdvW8yJ5pn6WIeC2-NiWy4nigvuO1KpTYG2YlMdrG8xbemh5IYx1bOoPSIttlFvi8uPp9DnvsB6yKniHw_qYgr_KOkWE74kz2a7VHx17bfk-6eP3-6-DA9fP9_ffXgY_LhhbQh-UlIzjSiDnJ1FzoMI02ZExWcfRm43mk1aMs2dkFoLy61Uyk1ebJzlbrwlby--_fiPI9Zm9rF6XBabMB-rmUAIpUfdQXYBfcm1FpzNocS9LSfDwJxzNzvTczfn3A3wXqpr3lzNj26P4a_iGnQH3l8A7C_-jFhM9RGTxxAL-mZCjv-x_w0mLZYN</recordid><startdate>20070501</startdate><enddate>20070501</enddate><creator>Satoh, Shin-ichi</creator><creator>Masatoshi, Sakie</creator><creator>Shou, Zhangfei</creator><creator>Yamamoto, Taichi</creator><creator>Ishigure, Tatsuya</creator><creator>Semii, Atsushi</creator><creator>Yamada, Kazuya</creator><creator>Noguchi, Tamio</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20070501</creationdate><title>Identification of cis-regulatory elements and trans-acting proteins of the rat carbohydrate response element binding protein gene</title><author>Satoh, Shin-ichi ; Masatoshi, Sakie ; Shou, Zhangfei ; Yamamoto, Taichi ; Ishigure, Tatsuya ; Semii, Atsushi ; Yamada, Kazuya ; Noguchi, Tamio</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c351t-dc786919ee6d6fbae22d4d753e82fcd32a591796192b46994a2a688b7c45ba2b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - biosynthesis</topic><topic>Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics</topic><topic>CCAAT-Binding Factor - genetics</topic><topic>Cell Line, Tumor</topic><topic>Cells, Cultured</topic><topic>Cercopithecus aethiops</topic><topic>ChREBP</topic><topic>COS Cells</topic><topic>HeLa Cells</topic><topic>Humans</topic><topic>Male</topic><topic>Molecular Sequence Data</topic><topic>Multigene Family</topic><topic>NF-Y</topic><topic>Promoter Regions, Genetic</topic><topic>Protein Binding - genetics</topic><topic>Rats</topic><topic>Rats, Sprague-Dawley</topic><topic>Regulatory Elements, Transcriptional - genetics</topic><topic>Sp1</topic><topic>Sp1 Transcription Factor - genetics</topic><topic>SREBP</topic><topic>Trans-Activators - genetics</topic><topic>Trans-Activators - physiology</topic><topic>Transcription</topic><topic>Transcription Initiation Site - physiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Satoh, Shin-ichi</creatorcontrib><creatorcontrib>Masatoshi, Sakie</creatorcontrib><creatorcontrib>Shou, Zhangfei</creatorcontrib><creatorcontrib>Yamamoto, Taichi</creatorcontrib><creatorcontrib>Ishigure, Tatsuya</creatorcontrib><creatorcontrib>Semii, Atsushi</creatorcontrib><creatorcontrib>Yamada, Kazuya</creatorcontrib><creatorcontrib>Noguchi, Tamio</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of biochemistry and biophysics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Satoh, Shin-ichi</au><au>Masatoshi, Sakie</au><au>Shou, Zhangfei</au><au>Yamamoto, Taichi</au><au>Ishigure, Tatsuya</au><au>Semii, Atsushi</au><au>Yamada, Kazuya</au><au>Noguchi, Tamio</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of cis-regulatory elements and trans-acting proteins of the rat carbohydrate response element binding protein gene</atitle><jtitle>Archives of biochemistry and biophysics</jtitle><addtitle>Arch Biochem Biophys</addtitle><date>2007-05-01</date><risdate>2007</risdate><volume>461</volume><issue>1</issue><spage>113</spage><epage>122</epage><pages>113-122</pages><issn>0003-9861</issn><eissn>1096-0384</eissn><abstract>Carbohydrate response element binding protein (ChREBP) is a transcription factor that activates liver glycolytic and lipogenetic enzyme genes in response to high carbohydrate diet. Here we report the transcriptional regulatory mechanisms for the rat
ChREBP gene. Firstly, we determined the transcription initiation site and the nucleotide sequences of the rat
ChREBP promoter region encompassing approximately 900
bp from the ATG initiation codon. Reporter gene assays demonstrated that the major positive regulatory region exists in the nucleotide sequence between −163 and −32 of the
ChREBP gene. This region contains a cluster of putative transcription factor binding elements that consist of two specificity protein 1 (Sp1) binding sites (−66 to −50 and −93 to −78), a sterol regulatory element (−101 to −110), and two nuclear factor-Y (NF-Y) binding sites (−23 to −19 and −131 to −127). Mutations introduced into these sites caused marked reduction of
ChREBP promoter activities. Functional synergisms were observed between Sp1/NF-Y and Sp1/sterol regulatory element-binding protein. Additionally, electrophoretic mobility shift assays and chromatin immunoprecipitation assays demonstrated that these factors bound to these elements. Thus, we conclude that functional synergisms between these transcription factors are critical for
ChREBP gene transcription.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>17418800</pmid><doi>10.1016/j.abb.2007.02.028</doi><tpages>10</tpages></addata></record> |
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subjects | Animals Base Sequence Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - biosynthesis Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics CCAAT-Binding Factor - genetics Cell Line, Tumor Cells, Cultured Cercopithecus aethiops ChREBP COS Cells HeLa Cells Humans Male Molecular Sequence Data Multigene Family NF-Y Promoter Regions, Genetic Protein Binding - genetics Rats Rats, Sprague-Dawley Regulatory Elements, Transcriptional - genetics Sp1 Sp1 Transcription Factor - genetics SREBP Trans-Activators - genetics Trans-Activators - physiology Transcription Transcription Initiation Site - physiology |
title | Identification of cis-regulatory elements and trans-acting proteins of the rat carbohydrate response element binding protein gene |
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