Recovery and STR Amplification of DNA from RFLP Membranes

:  Restriction fragment length polymorphism (RFLP) techniques were utilized in the forensic DNA community until the mid 1990s when less labor‐intensive polymerase chain reaction short tandem repeat (PCR STR) techniques became available. During the transition from RFLP technology to PCR‐based STR pla...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of forensic sciences 2008-03, Vol.53 (2), p.349-358
Hauptverfasser: Steadman, Shelly A., McDonald, J. David, Andrews, John S., Watson, Nigel D.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 358
container_issue 2
container_start_page 349
container_title Journal of forensic sciences
container_volume 53
creator Steadman, Shelly A.
McDonald, J. David
Andrews, John S.
Watson, Nigel D.
description :  Restriction fragment length polymorphism (RFLP) techniques were utilized in the forensic DNA community until the mid 1990s when less labor‐intensive polymerase chain reaction short tandem repeat (PCR STR) techniques became available. During the transition from RFLP technology to PCR‐based STR platforms, a method for comparing RFLP profiles to STR profiles was not developed. While the preferred approach for applying new technology to old cases would be to analyze the original biological stain, this is not always possible. For unsolved cases that previously underwent RFLP analysis, the only DNA remaining may be restriction cut and bound to nylon membranes. These studies investigate several methods for obtaining STR profiles from membrane bound DNA, including removal of bound DNA with bases, acids, detergents, various chemicals, and conventional cell extraction solutions. Direct multiplex STR amplification of template in the membrane‐bound state was also explored. A partial STR profile was obtained from DNA that was recovered from an archived membrane using conventional extraction buffer components, indicating promise for recovering useful STR information from RFLP membranes that have been maintained in long‐term frozen storage.
doi_str_mv 10.1111/j.1556-4029.2008.00674.x
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_70438124</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>70438124</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4314-e12eee06b5440d6a9a565f80389979d27d5f66fda90a7efd01044f8f9898256a3</originalsourceid><addsrcrecordid>eNqNkMFuEzEQhi0EomnhFZDFgdsuY6_ttSUuoXRTqtCWUAS3kbNrSxt2s8FO2uTtcZqoSJyYi0fy9_8afYRQBjlL836RMylVJoCbnAPoHECVIt8-I6Onj-dkBMB5xpjRJ-Q0xgUkiin2kpwwXSglVTkiZubq4d6FHbXLhn67m9Fxv-pa39Z23Q5LOnj66XpMfRh6Oqumt_SL6-fBLl18RV5420X3-vieke_Vxd35ZTa9mXw-H0-zWhRMZI5x5xyouRQCGmWNlUp6DYU2pjQNLxvplfKNNWBL5xtgIITX3mijuVS2OCPvDr2rMPzeuLjGvo2167p0xLCJWIIoNOMigW__ARfDJizTbciZUSaZkQnSB6gOQ4zBeVyFtrdhhwxw7xYXuFeIe4W4d4uPbnGbom-O_Zt575q_waPMBHw4AA9t53b_XYxX1U1aUjw7xNu4dtunuA2_MJWXEn9cT_Dj5ddbPal-YlX8Ad90k1Q</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>219691555</pqid></control><display><type>article</type><title>Recovery and STR Amplification of DNA from RFLP Membranes</title><source>MEDLINE</source><source>Wiley Online Library Journals Frontfile Complete</source><creator>Steadman, Shelly A. ; McDonald, J. David ; Andrews, John S. ; Watson, Nigel D.</creator><creatorcontrib>Steadman, Shelly A. ; McDonald, J. David ; Andrews, John S. ; Watson, Nigel D.</creatorcontrib><description>:  Restriction fragment length polymorphism (RFLP) techniques were utilized in the forensic DNA community until the mid 1990s when less labor‐intensive polymerase chain reaction short tandem repeat (PCR STR) techniques became available. During the transition from RFLP technology to PCR‐based STR platforms, a method for comparing RFLP profiles to STR profiles was not developed. While the preferred approach for applying new technology to old cases would be to analyze the original biological stain, this is not always possible. For unsolved cases that previously underwent RFLP analysis, the only DNA remaining may be restriction cut and bound to nylon membranes. These studies investigate several methods for obtaining STR profiles from membrane bound DNA, including removal of bound DNA with bases, acids, detergents, various chemicals, and conventional cell extraction solutions. Direct multiplex STR amplification of template in the membrane‐bound state was also explored. A partial STR profile was obtained from DNA that was recovered from an archived membrane using conventional extraction buffer components, indicating promise for recovering useful STR information from RFLP membranes that have been maintained in long‐term frozen storage.</description><identifier>ISSN: 0022-1198</identifier><identifier>EISSN: 1556-4029</identifier><identifier>DOI: 10.1111/j.1556-4029.2008.00674.x</identifier><identifier>PMID: 18366567</identifier><identifier>CODEN: JFSCAS</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>amplification ; Deoxyribonucleic acid ; DNA ; DNA - isolation &amp; purification ; DNA typing ; Female ; forensic science ; Forensic sciences ; Humans ; membrane ; Membranes ; Membranes, Artificial ; Nylons ; Polymerase Chain Reaction ; Polymorphism ; Polymorphism, Restriction Fragment Length ; Preservation, Biological ; restriction fragment length polymorphism ; Studies ; Tandem Repeat Sequences</subject><ispartof>Journal of forensic sciences, 2008-03, Vol.53 (2), p.349-358</ispartof><rights>2008 American Academy of Forensic Sciences</rights><rights>Copyright American Society for Testing and Materials Mar 2008</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4314-e12eee06b5440d6a9a565f80389979d27d5f66fda90a7efd01044f8f9898256a3</citedby><cites>FETCH-LOGICAL-c4314-e12eee06b5440d6a9a565f80389979d27d5f66fda90a7efd01044f8f9898256a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1556-4029.2008.00674.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1556-4029.2008.00674.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18366567$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Steadman, Shelly A.</creatorcontrib><creatorcontrib>McDonald, J. David</creatorcontrib><creatorcontrib>Andrews, John S.</creatorcontrib><creatorcontrib>Watson, Nigel D.</creatorcontrib><title>Recovery and STR Amplification of DNA from RFLP Membranes</title><title>Journal of forensic sciences</title><addtitle>J Forensic Sci</addtitle><description>:  Restriction fragment length polymorphism (RFLP) techniques were utilized in the forensic DNA community until the mid 1990s when less labor‐intensive polymerase chain reaction short tandem repeat (PCR STR) techniques became available. During the transition from RFLP technology to PCR‐based STR platforms, a method for comparing RFLP profiles to STR profiles was not developed. While the preferred approach for applying new technology to old cases would be to analyze the original biological stain, this is not always possible. For unsolved cases that previously underwent RFLP analysis, the only DNA remaining may be restriction cut and bound to nylon membranes. These studies investigate several methods for obtaining STR profiles from membrane bound DNA, including removal of bound DNA with bases, acids, detergents, various chemicals, and conventional cell extraction solutions. Direct multiplex STR amplification of template in the membrane‐bound state was also explored. A partial STR profile was obtained from DNA that was recovered from an archived membrane using conventional extraction buffer components, indicating promise for recovering useful STR information from RFLP membranes that have been maintained in long‐term frozen storage.</description><subject>amplification</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA - isolation &amp; purification</subject><subject>DNA typing</subject><subject>Female</subject><subject>forensic science</subject><subject>Forensic sciences</subject><subject>Humans</subject><subject>membrane</subject><subject>Membranes</subject><subject>Membranes, Artificial</subject><subject>Nylons</subject><subject>Polymerase Chain Reaction</subject><subject>Polymorphism</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Preservation, Biological</subject><subject>restriction fragment length polymorphism</subject><subject>Studies</subject><subject>Tandem Repeat Sequences</subject><issn>0022-1198</issn><issn>1556-4029</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkMFuEzEQhi0EomnhFZDFgdsuY6_ttSUuoXRTqtCWUAS3kbNrSxt2s8FO2uTtcZqoSJyYi0fy9_8afYRQBjlL836RMylVJoCbnAPoHECVIt8-I6Onj-dkBMB5xpjRJ-Q0xgUkiin2kpwwXSglVTkiZubq4d6FHbXLhn67m9Fxv-pa39Z23Q5LOnj66XpMfRh6Oqumt_SL6-fBLl18RV5420X3-vieke_Vxd35ZTa9mXw-H0-zWhRMZI5x5xyouRQCGmWNlUp6DYU2pjQNLxvplfKNNWBL5xtgIITX3mijuVS2OCPvDr2rMPzeuLjGvo2167p0xLCJWIIoNOMigW__ARfDJizTbciZUSaZkQnSB6gOQ4zBeVyFtrdhhwxw7xYXuFeIe4W4d4uPbnGbom-O_Zt575q_waPMBHw4AA9t53b_XYxX1U1aUjw7xNu4dtunuA2_MJWXEn9cT_Dj5ddbPal-YlX8Ad90k1Q</recordid><startdate>200803</startdate><enddate>200803</enddate><creator>Steadman, Shelly A.</creator><creator>McDonald, J. David</creator><creator>Andrews, John S.</creator><creator>Watson, Nigel D.</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>K7.</scope><scope>7X8</scope></search><sort><creationdate>200803</creationdate><title>Recovery and STR Amplification of DNA from RFLP Membranes</title><author>Steadman, Shelly A. ; McDonald, J. David ; Andrews, John S. ; Watson, Nigel D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4314-e12eee06b5440d6a9a565f80389979d27d5f66fda90a7efd01044f8f9898256a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>amplification</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA - isolation &amp; purification</topic><topic>DNA typing</topic><topic>Female</topic><topic>forensic science</topic><topic>Forensic sciences</topic><topic>Humans</topic><topic>membrane</topic><topic>Membranes</topic><topic>Membranes, Artificial</topic><topic>Nylons</topic><topic>Polymerase Chain Reaction</topic><topic>Polymorphism</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Preservation, Biological</topic><topic>restriction fragment length polymorphism</topic><topic>Studies</topic><topic>Tandem Repeat Sequences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Steadman, Shelly A.</creatorcontrib><creatorcontrib>McDonald, J. David</creatorcontrib><creatorcontrib>Andrews, John S.</creatorcontrib><creatorcontrib>Watson, Nigel D.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Criminal Justice (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of forensic sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Steadman, Shelly A.</au><au>McDonald, J. David</au><au>Andrews, John S.</au><au>Watson, Nigel D.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recovery and STR Amplification of DNA from RFLP Membranes</atitle><jtitle>Journal of forensic sciences</jtitle><addtitle>J Forensic Sci</addtitle><date>2008-03</date><risdate>2008</risdate><volume>53</volume><issue>2</issue><spage>349</spage><epage>358</epage><pages>349-358</pages><issn>0022-1198</issn><eissn>1556-4029</eissn><coden>JFSCAS</coden><abstract>:  Restriction fragment length polymorphism (RFLP) techniques were utilized in the forensic DNA community until the mid 1990s when less labor‐intensive polymerase chain reaction short tandem repeat (PCR STR) techniques became available. During the transition from RFLP technology to PCR‐based STR platforms, a method for comparing RFLP profiles to STR profiles was not developed. While the preferred approach for applying new technology to old cases would be to analyze the original biological stain, this is not always possible. For unsolved cases that previously underwent RFLP analysis, the only DNA remaining may be restriction cut and bound to nylon membranes. These studies investigate several methods for obtaining STR profiles from membrane bound DNA, including removal of bound DNA with bases, acids, detergents, various chemicals, and conventional cell extraction solutions. Direct multiplex STR amplification of template in the membrane‐bound state was also explored. A partial STR profile was obtained from DNA that was recovered from an archived membrane using conventional extraction buffer components, indicating promise for recovering useful STR information from RFLP membranes that have been maintained in long‐term frozen storage.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>18366567</pmid><doi>10.1111/j.1556-4029.2008.00674.x</doi><tpages>10</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0022-1198
ispartof Journal of forensic sciences, 2008-03, Vol.53 (2), p.349-358
issn 0022-1198
1556-4029
language eng
recordid cdi_proquest_miscellaneous_70438124
source MEDLINE; Wiley Online Library Journals Frontfile Complete
subjects amplification
Deoxyribonucleic acid
DNA
DNA - isolation & purification
DNA typing
Female
forensic science
Forensic sciences
Humans
membrane
Membranes
Membranes, Artificial
Nylons
Polymerase Chain Reaction
Polymorphism
Polymorphism, Restriction Fragment Length
Preservation, Biological
restriction fragment length polymorphism
Studies
Tandem Repeat Sequences
title Recovery and STR Amplification of DNA from RFLP Membranes
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-01T16%3A53%3A00IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Recovery%20and%20STR%20Amplification%20of%20DNA%20from%20RFLP%20Membranes&rft.jtitle=Journal%20of%20forensic%20sciences&rft.au=Steadman,%20Shelly%20A.&rft.date=2008-03&rft.volume=53&rft.issue=2&rft.spage=349&rft.epage=358&rft.pages=349-358&rft.issn=0022-1198&rft.eissn=1556-4029&rft.coden=JFSCAS&rft_id=info:doi/10.1111/j.1556-4029.2008.00674.x&rft_dat=%3Cproquest_cross%3E70438124%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=219691555&rft_id=info:pmid/18366567&rfr_iscdi=true