Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1

1 Berlin University of Technology, Environmental Microbiology Group, Franklinstrasse 29, Sekr. FR 1-2, D-10587 Berlin, Germany 2 Hamburg University of Technology, Technical Microbiology, Kasernenstrasse 12, D-21073 Hamburg, Germany 3 Anagnostec GmbH, Am Mühlenberg 11, D-14476 Potsdam-Golm, Germany 4...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2008-03, Vol.58 (3), p.585-590
Hauptverfasser: Graeber, Ingeborg, Kaesler, Ines, Borchert, Martin S, Dieckmann, Ralf, Pape, Thomas, Lurz, Rudi, Nielsen, Preben, von Dohren, Hans, Michaelis, Walter, Szewzyk, Ulrich
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container_title International journal of systematic and evolutionary microbiology
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creator Graeber, Ingeborg
Kaesler, Ines
Borchert, Martin S
Dieckmann, Ralf
Pape, Thomas
Lurz, Rudi
Nielsen, Preben
von Dohren, Hans
Michaelis, Walter
Szewzyk, Ulrich
description 1 Berlin University of Technology, Environmental Microbiology Group, Franklinstrasse 29, Sekr. FR 1-2, D-10587 Berlin, Germany 2 Hamburg University of Technology, Technical Microbiology, Kasernenstrasse 12, D-21073 Hamburg, Germany 3 Anagnostec GmbH, Am Mühlenberg 11, D-14476 Potsdam-Golm, Germany 4 University of Hamburg, Institute of Biogeochemistry and Marine Chemistry, Bundesstrasse 55, D-20146 Hamburg, Germany 5 Max-Planck Institute for Molecular Genetics, Ihnestrasse 63-73, D-14195 Berlin, Germany 6 Novozymes A/S, Bacterial screening, Krogshøjvej 36, DK-2880 Bagsværd, Denmark 7 Berlin University of Technology, Biochemistry and Molecular Biology Group, Franklinstrasse 29, Sekr. OE2, D-10587 Berlin, Germany Correspondence Ingeborg Graeber i.graeber{at}web.de Strain HAL40b T was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optimal growth was observed at 20–30 °C, pH 7–9 and in 3 % NaCl. Substrate utilization tests were positive for arabinose, Tween 40 and Tween 80. Enzyme tests were positive for alkaline phosphatase, esterase lipase (C8), leucine arylamidase, acid phosphatase, naphthol-AS-BI-phosphohydrolase and N -acetyl- β -glucosaminidase. The predominant cellular fatty acid was C 17 : 1 8, followed by C 17 : 0 and C 18 : 1 7. Analysis by matrix-assisted laser desorption/ionization time-of-flight MS was used to characterize the strain, producing a characteristic low-molecular-mass protein pattern that could be used as a fingerprint for identification of members of this species. The DNA G+C content was 69.1 mol%. Phylogenetic analysis supported by 16S rRNA gene sequence comparison classified the strain as a member of the class Gammaproteobacteria . Strain HAL40b T was only distantly related to other marine bacteria including Neptunomonas naphthovorans and Marinobacter daepoensis (type strain sequence similarity >90 %). Based on its phenotypic, physiological and phylogenetic characteristics, it is proposed that the strain should be placed into a new genus as a representative of a novel species, Spongiibacter marinus gen. nov., sp. nov.; the type strain of Spongiibacter marinus is HAL40b T (=DSM 17750 T =CCUG 54896 T ). Abbreviations: FAMEs, fatty acid methyl esters; MALDI-TOF, matrix-assisted laser desorption/
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FR 1-2, D-10587 Berlin, Germany 2 Hamburg University of Technology, Technical Microbiology, Kasernenstrasse 12, D-21073 Hamburg, Germany 3 Anagnostec GmbH, Am Mühlenberg 11, D-14476 Potsdam-Golm, Germany 4 University of Hamburg, Institute of Biogeochemistry and Marine Chemistry, Bundesstrasse 55, D-20146 Hamburg, Germany 5 Max-Planck Institute for Molecular Genetics, Ihnestrasse 63-73, D-14195 Berlin, Germany 6 Novozymes A/S, Bacterial screening, Krogshøjvej 36, DK-2880 Bagsværd, Denmark 7 Berlin University of Technology, Biochemistry and Molecular Biology Group, Franklinstrasse 29, Sekr. OE2, D-10587 Berlin, Germany Correspondence Ingeborg Graeber i.graeber{at}web.de Strain HAL40b T was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optimal growth was observed at 20–30 °C, pH 7–9 and in 3 % NaCl. Substrate utilization tests were positive for arabinose, Tween 40 and Tween 80. Enzyme tests were positive for alkaline phosphatase, esterase lipase (C8), leucine arylamidase, acid phosphatase, naphthol-AS-BI-phosphohydrolase and N -acetyl- β -glucosaminidase. The predominant cellular fatty acid was C 17 : 1 8, followed by C 17 : 0 and C 18 : 1 7. Analysis by matrix-assisted laser desorption/ionization time-of-flight MS was used to characterize the strain, producing a characteristic low-molecular-mass protein pattern that could be used as a fingerprint for identification of members of this species. The DNA G+C content was 69.1 mol%. Phylogenetic analysis supported by 16S rRNA gene sequence comparison classified the strain as a member of the class Gammaproteobacteria . Strain HAL40b T was only distantly related to other marine bacteria including Neptunomonas naphthovorans and Marinobacter daepoensis (type strain sequence similarity &gt;90 %). Based on its phenotypic, physiological and phylogenetic characteristics, it is proposed that the strain should be placed into a new genus as a representative of a novel species, Spongiibacter marinus gen. nov., sp. nov.; the type strain of Spongiibacter marinus is HAL40b T (=DSM 17750 T =CCUG 54896 T ). Abbreviations: FAMEs, fatty acid methyl esters; MALDI-TOF, matrix-assisted laser desorption/ionization time-of-flight Present address: Research Center Ocean Margins, University of Bremen, Klagenfurter Strasse, D-28359 Bremen, Germany. The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain HAL40b T is AM117932 . A MALDI-TOF MS profile showing characteristic peaks and fatty acid composition data of Spongiibacter marinus HAL40b T are available as supplementary material with the online version of this paper.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.65438-0</identifier><identifier>PMID: 18319460</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Animals ; Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biological and medical sciences ; DNA, Bacterial - analysis ; DNA, Ribosomal - analysis ; Fatty Acids - analysis ; Fundamental and applied biological sciences. Psychology ; Gammaproteobacteria - classification ; Gammaproteobacteria - genetics ; Gammaproteobacteria - isolation &amp; purification ; Gammaproteobacteria - physiology ; Genes, rRNA ; Haliclona ; Haliclona - microbiology ; Marine ; Marinobacter ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Neptunomonas naphthovorans ; Norway ; Phenotype ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Seawater - microbiology ; Sequence Analysis, DNA ; Sodium Chloride ; Species Specificity ; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ; Sula ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2008-03, Vol.58 (3), p.585-590</ispartof><rights>2008 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-cc265f107b19648717e25badbf076baf0fbad8582d1b2d83efbb757339b7ee9d3</citedby><cites>FETCH-LOGICAL-c423t-cc265f107b19648717e25badbf076baf0fbad8582d1b2d83efbb757339b7ee9d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,3747,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=20188992$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18319460$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Graeber, Ingeborg</creatorcontrib><creatorcontrib>Kaesler, Ines</creatorcontrib><creatorcontrib>Borchert, Martin S</creatorcontrib><creatorcontrib>Dieckmann, Ralf</creatorcontrib><creatorcontrib>Pape, Thomas</creatorcontrib><creatorcontrib>Lurz, Rudi</creatorcontrib><creatorcontrib>Nielsen, Preben</creatorcontrib><creatorcontrib>von Dohren, Hans</creatorcontrib><creatorcontrib>Michaelis, Walter</creatorcontrib><creatorcontrib>Szewzyk, Ulrich</creatorcontrib><title>Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Berlin University of Technology, Environmental Microbiology Group, Franklinstrasse 29, Sekr. FR 1-2, D-10587 Berlin, Germany 2 Hamburg University of Technology, Technical Microbiology, Kasernenstrasse 12, D-21073 Hamburg, Germany 3 Anagnostec GmbH, Am Mühlenberg 11, D-14476 Potsdam-Golm, Germany 4 University of Hamburg, Institute of Biogeochemistry and Marine Chemistry, Bundesstrasse 55, D-20146 Hamburg, Germany 5 Max-Planck Institute for Molecular Genetics, Ihnestrasse 63-73, D-14195 Berlin, Germany 6 Novozymes A/S, Bacterial screening, Krogshøjvej 36, DK-2880 Bagsværd, Denmark 7 Berlin University of Technology, Biochemistry and Molecular Biology Group, Franklinstrasse 29, Sekr. OE2, D-10587 Berlin, Germany Correspondence Ingeborg Graeber i.graeber{at}web.de Strain HAL40b T was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optimal growth was observed at 20–30 °C, pH 7–9 and in 3 % NaCl. Substrate utilization tests were positive for arabinose, Tween 40 and Tween 80. Enzyme tests were positive for alkaline phosphatase, esterase lipase (C8), leucine arylamidase, acid phosphatase, naphthol-AS-BI-phosphohydrolase and N -acetyl- β -glucosaminidase. The predominant cellular fatty acid was C 17 : 1 8, followed by C 17 : 0 and C 18 : 1 7. Analysis by matrix-assisted laser desorption/ionization time-of-flight MS was used to characterize the strain, producing a characteristic low-molecular-mass protein pattern that could be used as a fingerprint for identification of members of this species. The DNA G+C content was 69.1 mol%. Phylogenetic analysis supported by 16S rRNA gene sequence comparison classified the strain as a member of the class Gammaproteobacteria . Strain HAL40b T was only distantly related to other marine bacteria including Neptunomonas naphthovorans and Marinobacter daepoensis (type strain sequence similarity &gt;90 %). Based on its phenotypic, physiological and phylogenetic characteristics, it is proposed that the strain should be placed into a new genus as a representative of a novel species, Spongiibacter marinus gen. nov., sp. nov.; the type strain of Spongiibacter marinus is HAL40b T (=DSM 17750 T =CCUG 54896 T ). Abbreviations: FAMEs, fatty acid methyl esters; MALDI-TOF, matrix-assisted laser desorption/ionization time-of-flight Present address: Research Center Ocean Margins, University of Bremen, Klagenfurter Strasse, D-28359 Bremen, Germany. The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain HAL40b T is AM117932 . A MALDI-TOF MS profile showing characteristic peaks and fatty acid composition data of Spongiibacter marinus HAL40b T are available as supplementary material with the online version of this paper.</description><subject>Animals</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Ribosomal - analysis</subject><subject>Fatty Acids - analysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gammaproteobacteria - classification</subject><subject>Gammaproteobacteria - genetics</subject><subject>Gammaproteobacteria - isolation &amp; purification</subject><subject>Gammaproteobacteria - physiology</subject><subject>Genes, rRNA</subject><subject>Haliclona</subject><subject>Haliclona - microbiology</subject><subject>Marine</subject><subject>Marinobacter</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Neptunomonas naphthovorans</subject><subject>Norway</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Sodium Chloride</subject><subject>Species Specificity</subject><subject>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</subject><subject>Sula</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc2P1SAUxYnROOPTpVvDRmdjKx-lwNJMHMdkEhfqmgCFVya0VGj9-O9lps9x6QbOhd89l3AAeIlRi5GU78JtaVHbs46KBj0C57jr-4Yh2j1-0KQ_A89KuUWoHiD0FJxhQbGs-hz8-rKk-RiC0XZ1GU46h3kr8OjmFs7pR_sWluWv0nDUMS1jiMHupIN7X9gmGEqKenUD9DlNcB3rXcpOx2pQJzh4rWtbTLO-d8TPwROvY3EvTvsBfLv68PXyurn5_PHT5fubxnaEro21pGceI26w7DvBMXeEGT0Yj3hvtEe-FoIJMmBDBkGdN4YzTqk03Dk50AN4s_suOX3fXFnVFIp1MerZpa0ojmhPuMT_BbGkgnV1PYBmB21OpWTn1ZJD_Y7fCiN1l4mqmSik7jNRqPKvTsabmdzwjz6FUIHXJ0AXq6PPerahPHAEYSGkJJW72LkxHMefITtVY5pCfYYJ6W4oE4oqJhj9A_RBowE</recordid><startdate>20080301</startdate><enddate>20080301</enddate><creator>Graeber, Ingeborg</creator><creator>Kaesler, Ines</creator><creator>Borchert, Martin S</creator><creator>Dieckmann, Ralf</creator><creator>Pape, Thomas</creator><creator>Lurz, Rudi</creator><creator>Nielsen, Preben</creator><creator>von Dohren, Hans</creator><creator>Michaelis, Walter</creator><creator>Szewzyk, Ulrich</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20080301</creationdate><title>Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1</title><author>Graeber, Ingeborg ; Kaesler, Ines ; Borchert, Martin S ; Dieckmann, Ralf ; Pape, Thomas ; Lurz, Rudi ; Nielsen, Preben ; von Dohren, Hans ; Michaelis, Walter ; Szewzyk, Ulrich</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-cc265f107b19648717e25badbf076baf0fbad8582d1b2d83efbb757339b7ee9d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Animals</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Ribosomal - analysis</topic><topic>Fatty Acids - analysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gammaproteobacteria - classification</topic><topic>Gammaproteobacteria - genetics</topic><topic>Gammaproteobacteria - isolation &amp; purification</topic><topic>Gammaproteobacteria - physiology</topic><topic>Genes, rRNA</topic><topic>Haliclona</topic><topic>Haliclona - microbiology</topic><topic>Marine</topic><topic>Marinobacter</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Neptunomonas naphthovorans</topic><topic>Norway</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Sodium Chloride</topic><topic>Species Specificity</topic><topic>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</topic><topic>Sula</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Graeber, Ingeborg</creatorcontrib><creatorcontrib>Kaesler, Ines</creatorcontrib><creatorcontrib>Borchert, Martin S</creatorcontrib><creatorcontrib>Dieckmann, Ralf</creatorcontrib><creatorcontrib>Pape, Thomas</creatorcontrib><creatorcontrib>Lurz, Rudi</creatorcontrib><creatorcontrib>Nielsen, Preben</creatorcontrib><creatorcontrib>von Dohren, Hans</creatorcontrib><creatorcontrib>Michaelis, Walter</creatorcontrib><creatorcontrib>Szewzyk, Ulrich</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) 1: Biological Sciences &amp; Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Graeber, Ingeborg</au><au>Kaesler, Ines</au><au>Borchert, Martin S</au><au>Dieckmann, Ralf</au><au>Pape, Thomas</au><au>Lurz, Rudi</au><au>Nielsen, Preben</au><au>von Dohren, Hans</au><au>Michaelis, Walter</au><au>Szewzyk, Ulrich</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2008-03-01</date><risdate>2008</risdate><volume>58</volume><issue>3</issue><spage>585</spage><epage>590</epage><pages>585-590</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Berlin University of Technology, Environmental Microbiology Group, Franklinstrasse 29, Sekr. FR 1-2, D-10587 Berlin, Germany 2 Hamburg University of Technology, Technical Microbiology, Kasernenstrasse 12, D-21073 Hamburg, Germany 3 Anagnostec GmbH, Am Mühlenberg 11, D-14476 Potsdam-Golm, Germany 4 University of Hamburg, Institute of Biogeochemistry and Marine Chemistry, Bundesstrasse 55, D-20146 Hamburg, Germany 5 Max-Planck Institute for Molecular Genetics, Ihnestrasse 63-73, D-14195 Berlin, Germany 6 Novozymes A/S, Bacterial screening, Krogshøjvej 36, DK-2880 Bagsværd, Denmark 7 Berlin University of Technology, Biochemistry and Molecular Biology Group, Franklinstrasse 29, Sekr. OE2, D-10587 Berlin, Germany Correspondence Ingeborg Graeber i.graeber{at}web.de Strain HAL40b T was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optimal growth was observed at 20–30 °C, pH 7–9 and in 3 % NaCl. Substrate utilization tests were positive for arabinose, Tween 40 and Tween 80. Enzyme tests were positive for alkaline phosphatase, esterase lipase (C8), leucine arylamidase, acid phosphatase, naphthol-AS-BI-phosphohydrolase and N -acetyl- β -glucosaminidase. The predominant cellular fatty acid was C 17 : 1 8, followed by C 17 : 0 and C 18 : 1 7. Analysis by matrix-assisted laser desorption/ionization time-of-flight MS was used to characterize the strain, producing a characteristic low-molecular-mass protein pattern that could be used as a fingerprint for identification of members of this species. The DNA G+C content was 69.1 mol%. Phylogenetic analysis supported by 16S rRNA gene sequence comparison classified the strain as a member of the class Gammaproteobacteria . Strain HAL40b T was only distantly related to other marine bacteria including Neptunomonas naphthovorans and Marinobacter daepoensis (type strain sequence similarity &gt;90 %). Based on its phenotypic, physiological and phylogenetic characteristics, it is proposed that the strain should be placed into a new genus as a representative of a novel species, Spongiibacter marinus gen. nov., sp. nov.; the type strain of Spongiibacter marinus is HAL40b T (=DSM 17750 T =CCUG 54896 T ). Abbreviations: FAMEs, fatty acid methyl esters; MALDI-TOF, matrix-assisted laser desorption/ionization time-of-flight Present address: Research Center Ocean Margins, University of Bremen, Klagenfurter Strasse, D-28359 Bremen, Germany. The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain HAL40b T is AM117932 . A MALDI-TOF MS profile showing characteristic peaks and fatty acid composition data of Spongiibacter marinus HAL40b T are available as supplementary material with the online version of this paper.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>18319460</pmid><doi>10.1099/ijs.0.65438-0</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record>
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source MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection
subjects Animals
Bacterial Typing Techniques
Bacteriology
Base Composition
Biological and medical sciences
DNA, Bacterial - analysis
DNA, Ribosomal - analysis
Fatty Acids - analysis
Fundamental and applied biological sciences. Psychology
Gammaproteobacteria - classification
Gammaproteobacteria - genetics
Gammaproteobacteria - isolation & purification
Gammaproteobacteria - physiology
Genes, rRNA
Haliclona
Haliclona - microbiology
Marine
Marinobacter
Microbiology
Miscellaneous
Molecular Sequence Data
Neptunomonas naphthovorans
Norway
Phenotype
Phylogeny
RNA, Ribosomal, 16S - genetics
Seawater - microbiology
Sequence Analysis, DNA
Sodium Chloride
Species Specificity
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Sula
Systematics
title Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1
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