Assignment of two loci for autosomal dominant adolescent idiopathic scoliosis to chromosomes 9q31.2-q34.2 and 17q25.3-qtel
Background:Adolescent idiopathic scoliosis (AIS) is the most common form of spinal deformity, affecting up to 4% of children worldwide. Familial inheritance of AIS is now recognised and several potential candidate loci have been found.Methods:We studied 25 multi-generation AIS families of British de...
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description | Background:Adolescent idiopathic scoliosis (AIS) is the most common form of spinal deformity, affecting up to 4% of children worldwide. Familial inheritance of AIS is now recognised and several potential candidate loci have been found.Methods:We studied 25 multi-generation AIS families of British descent with at least 3 affected members in each family. A genomewide screen was performed using microsatellite markers spanning approximately 10-cM intervals throughout the genome. This analysis revealed linkage to several candidate chromosomal regions throughout the genome. Two-point linkage analysis was performed in all families to evaluate candidate loci. After identification of candidate loci, two-point linkage analysis was performed in the 10 families that segregated, to further refine disease intervals.Results:Significant linkage was obtained in a total of 10 families: 8 families to the telomeric region of chromosome 9q, and 2 families to the telomeric region of 17q. A significant LOD score was detected at marker D9S2157 Zmax = 3.64 (θ = 0.0) in a four-generation family (SC32). Saturation mapping of the 9q region in family SC32 defined the critical disease interval to be flanked by markers D9S930 and D9S1818, spanning approximately 21 Mb at 9q31.2-q34.2. In addition, seven other families segregated with this locus on 9q. In two multi-generation families (SC36 and SC23) not segregating with the 9q locus, a maximum combined LOD score of Zmax = 4.08 (θ = 0.0) was obtained for marker AAT095 on 17q. Fine mapping of the 17q candidate region defined the AIS critical region to be distal to marker D17S1806, spanning approximately 3.2 Mb on chromosome 17q25.3-qtel.Conclusion:This study reports a common locus for AIS in the British population, mapping to a refined interval on chromosome 9q31.2-q34.2 and defines a novel AIS locus on chromosome 17q25.3-qtel. |
doi_str_mv | 10.1136/jmg.2007.051896 |
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Familial inheritance of AIS is now recognised and several potential candidate loci have been found.Methods:We studied 25 multi-generation AIS families of British descent with at least 3 affected members in each family. A genomewide screen was performed using microsatellite markers spanning approximately 10-cM intervals throughout the genome. This analysis revealed linkage to several candidate chromosomal regions throughout the genome. Two-point linkage analysis was performed in all families to evaluate candidate loci. After identification of candidate loci, two-point linkage analysis was performed in the 10 families that segregated, to further refine disease intervals.Results:Significant linkage was obtained in a total of 10 families: 8 families to the telomeric region of chromosome 9q, and 2 families to the telomeric region of 17q. A significant LOD score was detected at marker D9S2157 Zmax = 3.64 (θ = 0.0) in a four-generation family (SC32). Saturation mapping of the 9q region in family SC32 defined the critical disease interval to be flanked by markers D9S930 and D9S1818, spanning approximately 21 Mb at 9q31.2-q34.2. In addition, seven other families segregated with this locus on 9q. In two multi-generation families (SC36 and SC23) not segregating with the 9q locus, a maximum combined LOD score of Zmax = 4.08 (θ = 0.0) was obtained for marker AAT095 on 17q. Fine mapping of the 17q candidate region defined the AIS critical region to be distal to marker D17S1806, spanning approximately 3.2 Mb on chromosome 17q25.3-qtel.Conclusion:This study reports a common locus for AIS in the British population, mapping to a refined interval on chromosome 9q31.2-q34.2 and defines a novel AIS locus on chromosome 17q25.3-qtel.</description><identifier>ISSN: 0022-2593</identifier><identifier>ISSN: 1468-6244</identifier><identifier>EISSN: 1468-6244</identifier><identifier>DOI: 10.1136/jmg.2007.051896</identifier><identifier>PMID: 17932119</identifier><identifier>CODEN: JMDGAE</identifier><language>eng</language><publisher>London: BMJ Publishing Group Ltd</publisher><subject>Adolescent ; Biological and medical sciences ; Chromosome Mapping ; Chromosomes ; Chromosomes, Human, Pair 17 - genetics ; Chromosomes, Human, Pair 9 - genetics ; Deoxyribonucleic acid ; Diseases of the osteoarticular system ; Diseases of the spine ; DNA ; Families & family life ; Family medical history ; Female ; Fundamental and applied biological sciences. Psychology ; Gene loci ; General aspects. Genetic counseling ; Genes, Dominant ; Genetics ; Genetics of eukaryotes. Biological and molecular evolution ; Genomes ; Genotype ; Hospitals ; Humans ; Lod Score ; Male ; Medical genetics ; Medical sciences ; Molecular and cellular biology ; Phenotype ; Radiography ; Scoliosis ; Scoliosis - genetics ; Scoliosis - pathology ; Skin ; Studies ; Surgery ; Transcription factors</subject><ispartof>Journal of medical genetics, 2008-02, Vol.45 (2), p.87-92</ispartof><rights>2008 BMJ Publishing Group Ltd</rights><rights>2008 INIST-CNRS</rights><rights>Copyright: 2008 2008 BMJ Publishing Group Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b523t-23feb04326b477ad2036b1ae0a67bbf7f60479d0362e9ebca2def8db352ca333</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://jmg.bmj.com/content/45/2/87.full.pdf$$EPDF$$P50$$Gbmj$$H</linktopdf><linktohtml>$$Uhttps://jmg.bmj.com/content/45/2/87.full$$EHTML$$P50$$Gbmj$$H</linktohtml><link.rule.ids>114,115,314,780,784,3196,23571,27924,27925,77600,77631</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20048725$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17932119$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ocaka, L</creatorcontrib><creatorcontrib>Zhao, C</creatorcontrib><creatorcontrib>Reed, J A</creatorcontrib><creatorcontrib>Ebenezer, N D</creatorcontrib><creatorcontrib>Brice, G</creatorcontrib><creatorcontrib>Morley, T</creatorcontrib><creatorcontrib>Mehta, M</creatorcontrib><creatorcontrib>O’Dowd, J</creatorcontrib><creatorcontrib>Weber, J L</creatorcontrib><creatorcontrib>Hardcastle, A J</creatorcontrib><creatorcontrib>Child, A H</creatorcontrib><title>Assignment of two loci for autosomal dominant adolescent idiopathic scoliosis to chromosomes 9q31.2-q34.2 and 17q25.3-qtel</title><title>Journal of medical genetics</title><addtitle>J Med Genet</addtitle><description>Background:Adolescent idiopathic scoliosis (AIS) is the most common form of spinal deformity, affecting up to 4% of children worldwide. Familial inheritance of AIS is now recognised and several potential candidate loci have been found.Methods:We studied 25 multi-generation AIS families of British descent with at least 3 affected members in each family. A genomewide screen was performed using microsatellite markers spanning approximately 10-cM intervals throughout the genome. This analysis revealed linkage to several candidate chromosomal regions throughout the genome. Two-point linkage analysis was performed in all families to evaluate candidate loci. After identification of candidate loci, two-point linkage analysis was performed in the 10 families that segregated, to further refine disease intervals.Results:Significant linkage was obtained in a total of 10 families: 8 families to the telomeric region of chromosome 9q, and 2 families to the telomeric region of 17q. A significant LOD score was detected at marker D9S2157 Zmax = 3.64 (θ = 0.0) in a four-generation family (SC32). Saturation mapping of the 9q region in family SC32 defined the critical disease interval to be flanked by markers D9S930 and D9S1818, spanning approximately 21 Mb at 9q31.2-q34.2. In addition, seven other families segregated with this locus on 9q. In two multi-generation families (SC36 and SC23) not segregating with the 9q locus, a maximum combined LOD score of Zmax = 4.08 (θ = 0.0) was obtained for marker AAT095 on 17q. Fine mapping of the 17q candidate region defined the AIS critical region to be distal to marker D17S1806, spanning approximately 3.2 Mb on chromosome 17q25.3-qtel.Conclusion:This study reports a common locus for AIS in the British population, mapping to a refined interval on chromosome 9q31.2-q34.2 and defines a novel AIS locus on chromosome 17q25.3-qtel.</description><subject>Adolescent</subject><subject>Biological and medical sciences</subject><subject>Chromosome Mapping</subject><subject>Chromosomes</subject><subject>Chromosomes, Human, Pair 17 - genetics</subject><subject>Chromosomes, Human, Pair 9 - genetics</subject><subject>Deoxyribonucleic acid</subject><subject>Diseases of the osteoarticular system</subject><subject>Diseases of the spine</subject><subject>DNA</subject><subject>Families & family life</subject><subject>Family medical history</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene loci</subject><subject>General aspects. Genetic counseling</subject><subject>Genes, Dominant</subject><subject>Genetics</subject><subject>Genetics of eukaryotes. Biological and molecular evolution</subject><subject>Genomes</subject><subject>Genotype</subject><subject>Hospitals</subject><subject>Humans</subject><subject>Lod Score</subject><subject>Male</subject><subject>Medical genetics</subject><subject>Medical sciences</subject><subject>Molecular and cellular biology</subject><subject>Phenotype</subject><subject>Radiography</subject><subject>Scoliosis</subject><subject>Scoliosis - genetics</subject><subject>Scoliosis - pathology</subject><subject>Skin</subject><subject>Studies</subject><subject>Surgery</subject><subject>Transcription factors</subject><issn>0022-2593</issn><issn>1468-6244</issn><issn>1468-6244</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqF0c1rFDEYBvAgil2rZ28SED0IM813Jsd28ZNSUYoeQ5LJtFlnJrvJDH789WaYpYKXngLJ733IywPAc4xqjKk42w03NUFI1ojjRokHYIOZaCpBGHsINggRUhGu6Al4kvMOIUwlFo_BCZaKEozVBvw5zzncjIMfJxg7OP2MsI8uwC4maOYp5jiYHrZxCKMpxLSx99ktOrQh7s10GxzMLvYh5pDhFKG7TXFY5nyG6kBxTaoDZTWBZmwhlgfCa1odJt8_BY8602f_7Hiegut3b6-3H6rLz-8_bs8vK8sJnSpCO28Ro0RYJqVpCaLCYuOREdLaTnYCManacku88tYZ0vquaS3lxBlK6Sl4vcbuUzzMPk96CGWDvjejj3PWEhEhKcP3QoI4FZypAl_-B3dxTmPZQWPZYCwaqZa4s1W5FHNOvtP7FAaTfmuM9FKeLuXppTy9llcmXhxzZzv49p8_tlXAqyMw2Zm-S2Z0Id-5ksUaSXhx1epCnvyvu3eTfuiyquT66ttWX3xR_Ov3T1JfFf9m9XbY3fvLv4hNvR8</recordid><startdate>20080201</startdate><enddate>20080201</enddate><creator>Ocaka, L</creator><creator>Zhao, C</creator><creator>Reed, J A</creator><creator>Ebenezer, N D</creator><creator>Brice, G</creator><creator>Morley, T</creator><creator>Mehta, M</creator><creator>O’Dowd, J</creator><creator>Weber, J L</creator><creator>Hardcastle, A J</creator><creator>Child, A H</creator><general>BMJ Publishing Group Ltd</general><general>BMJ</general><general>BMJ Publishing Group LTD</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BTHHO</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20080201</creationdate><title>Assignment of two loci for autosomal dominant adolescent idiopathic scoliosis to chromosomes 9q31.2-q34.2 and 17q25.3-qtel</title><author>Ocaka, L ; Zhao, C ; Reed, J A ; Ebenezer, N D ; Brice, G ; Morley, T ; Mehta, M ; O’Dowd, J ; Weber, J L ; Hardcastle, A J ; Child, A H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b523t-23feb04326b477ad2036b1ae0a67bbf7f60479d0362e9ebca2def8db352ca333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Adolescent</topic><topic>Biological and medical sciences</topic><topic>Chromosome Mapping</topic><topic>Chromosomes</topic><topic>Chromosomes, Human, Pair 17 - genetics</topic><topic>Chromosomes, Human, Pair 9 - genetics</topic><topic>Deoxyribonucleic acid</topic><topic>Diseases of the osteoarticular system</topic><topic>Diseases of the spine</topic><topic>DNA</topic><topic>Families & family life</topic><topic>Family medical history</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene loci</topic><topic>General aspects. Genetic counseling</topic><topic>Genes, Dominant</topic><topic>Genetics</topic><topic>Genetics of eukaryotes. Biological and molecular evolution</topic><topic>Genomes</topic><topic>Genotype</topic><topic>Hospitals</topic><topic>Humans</topic><topic>Lod Score</topic><topic>Male</topic><topic>Medical genetics</topic><topic>Medical sciences</topic><topic>Molecular and cellular biology</topic><topic>Phenotype</topic><topic>Radiography</topic><topic>Scoliosis</topic><topic>Scoliosis - genetics</topic><topic>Scoliosis - pathology</topic><topic>Skin</topic><topic>Studies</topic><topic>Surgery</topic><topic>Transcription factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ocaka, L</creatorcontrib><creatorcontrib>Zhao, C</creatorcontrib><creatorcontrib>Reed, J A</creatorcontrib><creatorcontrib>Ebenezer, N D</creatorcontrib><creatorcontrib>Brice, G</creatorcontrib><creatorcontrib>Morley, T</creatorcontrib><creatorcontrib>Mehta, M</creatorcontrib><creatorcontrib>O’Dowd, J</creatorcontrib><creatorcontrib>Weber, J L</creatorcontrib><creatorcontrib>Hardcastle, A J</creatorcontrib><creatorcontrib>Child, A H</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>STEM Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>BMJ Journals</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of medical genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ocaka, L</au><au>Zhao, C</au><au>Reed, J A</au><au>Ebenezer, N D</au><au>Brice, G</au><au>Morley, T</au><au>Mehta, M</au><au>O’Dowd, J</au><au>Weber, J L</au><au>Hardcastle, A J</au><au>Child, A H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assignment of two loci for autosomal dominant adolescent idiopathic scoliosis to chromosomes 9q31.2-q34.2 and 17q25.3-qtel</atitle><jtitle>Journal of medical genetics</jtitle><addtitle>J Med Genet</addtitle><date>2008-02-01</date><risdate>2008</risdate><volume>45</volume><issue>2</issue><spage>87</spage><epage>92</epage><pages>87-92</pages><issn>0022-2593</issn><issn>1468-6244</issn><eissn>1468-6244</eissn><coden>JMDGAE</coden><abstract>Background:Adolescent idiopathic scoliosis (AIS) is the most common form of spinal deformity, affecting up to 4% of children worldwide. Familial inheritance of AIS is now recognised and several potential candidate loci have been found.Methods:We studied 25 multi-generation AIS families of British descent with at least 3 affected members in each family. A genomewide screen was performed using microsatellite markers spanning approximately 10-cM intervals throughout the genome. This analysis revealed linkage to several candidate chromosomal regions throughout the genome. Two-point linkage analysis was performed in all families to evaluate candidate loci. After identification of candidate loci, two-point linkage analysis was performed in the 10 families that segregated, to further refine disease intervals.Results:Significant linkage was obtained in a total of 10 families: 8 families to the telomeric region of chromosome 9q, and 2 families to the telomeric region of 17q. A significant LOD score was detected at marker D9S2157 Zmax = 3.64 (θ = 0.0) in a four-generation family (SC32). Saturation mapping of the 9q region in family SC32 defined the critical disease interval to be flanked by markers D9S930 and D9S1818, spanning approximately 21 Mb at 9q31.2-q34.2. In addition, seven other families segregated with this locus on 9q. In two multi-generation families (SC36 and SC23) not segregating with the 9q locus, a maximum combined LOD score of Zmax = 4.08 (θ = 0.0) was obtained for marker AAT095 on 17q. Fine mapping of the 17q candidate region defined the AIS critical region to be distal to marker D17S1806, spanning approximately 3.2 Mb on chromosome 17q25.3-qtel.Conclusion:This study reports a common locus for AIS in the British population, mapping to a refined interval on chromosome 9q31.2-q34.2 and defines a novel AIS locus on chromosome 17q25.3-qtel.</abstract><cop>London</cop><pub>BMJ Publishing Group Ltd</pub><pmid>17932119</pmid><doi>10.1136/jmg.2007.051896</doi><tpages>6</tpages></addata></record> |
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subjects | Adolescent Biological and medical sciences Chromosome Mapping Chromosomes Chromosomes, Human, Pair 17 - genetics Chromosomes, Human, Pair 9 - genetics Deoxyribonucleic acid Diseases of the osteoarticular system Diseases of the spine DNA Families & family life Family medical history Female Fundamental and applied biological sciences. Psychology Gene loci General aspects. Genetic counseling Genes, Dominant Genetics Genetics of eukaryotes. Biological and molecular evolution Genomes Genotype Hospitals Humans Lod Score Male Medical genetics Medical sciences Molecular and cellular biology Phenotype Radiography Scoliosis Scoliosis - genetics Scoliosis - pathology Skin Studies Surgery Transcription factors |
title | Assignment of two loci for autosomal dominant adolescent idiopathic scoliosis to chromosomes 9q31.2-q34.2 and 17q25.3-qtel |
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