SSoNDelta and SSoNDeltalong: two thermostable esterases from the same ORF in the archaeon Sulfolobus solfataricus?
Previously, we reported from the Sulfolobus solfataricus open reading frame (ORF) SSO2517 the cloning, overexpression and characterization of an esterase belonging to the hormone-sensitive lipase (HSL) family and apparently having a deletion at the N-terminus, which we named SSoNDelta. Searching the...
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description | Previously, we reported from the Sulfolobus solfataricus open reading frame (ORF) SSO2517 the cloning, overexpression and characterization of an esterase belonging to the hormone-sensitive lipase (HSL) family and apparently having a deletion at the N-terminus, which we named SSoNDelta. Searching the recently reported Sulfolobus acidocaldarius genome by sequence alignment, using SSO2517 as a query, allowed identity of a putative esterase (ORF SAC1105) sharing high sequence similarity (82%) with SSO2517. This esterase displays an N-terminus and total length similar to other known esterases of the HSL family. Analysis of the upstream DNA sequence of SS02517 revealed the possibility of expressing a longer version of the protein with an extended N-terminus; however, no clear translation signal consistent with a longer protein version was detected. This new version of SSO2517 was cloned, over-expressed, purified and characterized. The resulting protein, named SSoNDeltalong, was 15-fold more active with the substrate p-nitrophenyl hexanoate than SSoNDelta. Furthermore, SSoNDeltalong and SSoNDelta displayed different substrate specificities for triacylglycerols. These results and the phylogenetic relationship between S. solfataricus and S. acidocaldarius suggest a common origin of SSO2517 and SAC1105 from an ancestral gene, followed by divergent evolution. Alternatively, a yet-to-be discovered mechanism of translation that directs the expression of SSoNDeltalong under specific metabolic conditions could be hypothesized. |
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Searching the recently reported Sulfolobus acidocaldarius genome by sequence alignment, using SSO2517 as a query, allowed identity of a putative esterase (ORF SAC1105) sharing high sequence similarity (82%) with SSO2517. This esterase displays an N-terminus and total length similar to other known esterases of the HSL family. Analysis of the upstream DNA sequence of SS02517 revealed the possibility of expressing a longer version of the protein with an extended N-terminus; however, no clear translation signal consistent with a longer protein version was detected. This new version of SSO2517 was cloned, over-expressed, purified and characterized. The resulting protein, named SSoNDeltalong, was 15-fold more active with the substrate p-nitrophenyl hexanoate than SSoNDelta. Furthermore, SSoNDeltalong and SSoNDelta displayed different substrate specificities for triacylglycerols. These results and the phylogenetic relationship between S. solfataricus and S. acidocaldarius suggest a common origin of SSO2517 and SAC1105 from an ancestral gene, followed by divergent evolution. Alternatively, a yet-to-be discovered mechanism of translation that directs the expression of SSoNDeltalong under specific metabolic conditions could be hypothesized.</description><identifier>ISSN: 1472-3646</identifier><identifier>PMID: 17350931</identifier><language>eng</language><publisher>United States</publisher><subject>Amino Acid Sequence ; Archaeal Proteins - chemistry ; Archaeal Proteins - genetics ; Archaeal Proteins - metabolism ; Base Sequence ; Carboxylesterase - chemistry ; Carboxylesterase - genetics ; Carboxylesterase - metabolism ; Cloning, Molecular ; Enzyme Stability ; Molecular Sequence Data ; Open Reading Frames ; Sequence Alignment ; Sulfolobus solfataricus - enzymology ; Sulfolobus solfataricus - genetics ; Sulfolobus solfataricus - metabolism</subject><ispartof>Archaea (Vancouver), 2007-05, Vol.2 (2), p.109-115</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17350931$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mandrich, Luigi</creatorcontrib><creatorcontrib>Pezzullo, Margherita</creatorcontrib><creatorcontrib>Rossi, Mosè</creatorcontrib><creatorcontrib>Manco, Giuseppe</creatorcontrib><title>SSoNDelta and SSoNDeltalong: two thermostable esterases from the same ORF in the archaeon Sulfolobus solfataricus?</title><title>Archaea (Vancouver)</title><addtitle>Archaea</addtitle><description>Previously, we reported from the Sulfolobus solfataricus open reading frame (ORF) SSO2517 the cloning, overexpression and characterization of an esterase belonging to the hormone-sensitive lipase (HSL) family and apparently having a deletion at the N-terminus, which we named SSoNDelta. Searching the recently reported Sulfolobus acidocaldarius genome by sequence alignment, using SSO2517 as a query, allowed identity of a putative esterase (ORF SAC1105) sharing high sequence similarity (82%) with SSO2517. This esterase displays an N-terminus and total length similar to other known esterases of the HSL family. Analysis of the upstream DNA sequence of SS02517 revealed the possibility of expressing a longer version of the protein with an extended N-terminus; however, no clear translation signal consistent with a longer protein version was detected. This new version of SSO2517 was cloned, over-expressed, purified and characterized. The resulting protein, named SSoNDeltalong, was 15-fold more active with the substrate p-nitrophenyl hexanoate than SSoNDelta. Furthermore, SSoNDeltalong and SSoNDelta displayed different substrate specificities for triacylglycerols. These results and the phylogenetic relationship between S. solfataricus and S. acidocaldarius suggest a common origin of SSO2517 and SAC1105 from an ancestral gene, followed by divergent evolution. Alternatively, a yet-to-be discovered mechanism of translation that directs the expression of SSoNDeltalong under specific metabolic conditions could be hypothesized.</description><subject>Amino Acid Sequence</subject><subject>Archaeal Proteins - chemistry</subject><subject>Archaeal Proteins - genetics</subject><subject>Archaeal Proteins - metabolism</subject><subject>Base Sequence</subject><subject>Carboxylesterase - chemistry</subject><subject>Carboxylesterase - genetics</subject><subject>Carboxylesterase - metabolism</subject><subject>Cloning, Molecular</subject><subject>Enzyme Stability</subject><subject>Molecular Sequence Data</subject><subject>Open Reading Frames</subject><subject>Sequence Alignment</subject><subject>Sulfolobus solfataricus - enzymology</subject><subject>Sulfolobus solfataricus - genetics</subject><subject>Sulfolobus solfataricus - metabolism</subject><issn>1472-3646</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kE1LAzEYhHNQbK3-BcnJ20I-dpNdLyLVVqFYsL0vb7Jv7Ep2U5NdxH9v1eppGOZhGOaETHmuRSZVribkPKU3xgTTqjwjE65lwSrJpyRuNuH5Hv0AFPqG_jsf-tcbOnwEOuwwdiENYDxSTANGSJioi6H7zmiCDun6ZUHb_sdDtDvA0NPN6F3wwYyJpuAdDBBbO6bbC3LqwCe8POqMbBcP2_ljtlovn-Z3q2xf5DzTTJaOgzAFlyVyXRbOiapEwW2jFGcGlOUWjZaNqixWhXJN43Lt0AglNMoZuf6t3cfwPh6G112bLHoPPYYx1ZqJPGelPoBXR3A0HTb1PrYdxM_67yT5BXYaY6Q</recordid><startdate>200705</startdate><enddate>200705</enddate><creator>Mandrich, Luigi</creator><creator>Pezzullo, Margherita</creator><creator>Rossi, Mosè</creator><creator>Manco, Giuseppe</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>200705</creationdate><title>SSoNDelta and SSoNDeltalong: two thermostable esterases from the same ORF in the archaeon Sulfolobus solfataricus?</title><author>Mandrich, Luigi ; Pezzullo, Margherita ; Rossi, Mosè ; Manco, Giuseppe</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p541-7038f1a2b5138e1785ff298e21cd6610ba6c1ceb73d69ce956fddf47feb2627e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Amino Acid Sequence</topic><topic>Archaeal Proteins - chemistry</topic><topic>Archaeal Proteins - genetics</topic><topic>Archaeal Proteins - metabolism</topic><topic>Base Sequence</topic><topic>Carboxylesterase - chemistry</topic><topic>Carboxylesterase - genetics</topic><topic>Carboxylesterase - metabolism</topic><topic>Cloning, Molecular</topic><topic>Enzyme Stability</topic><topic>Molecular Sequence Data</topic><topic>Open Reading Frames</topic><topic>Sequence Alignment</topic><topic>Sulfolobus solfataricus - enzymology</topic><topic>Sulfolobus solfataricus - genetics</topic><topic>Sulfolobus solfataricus - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mandrich, Luigi</creatorcontrib><creatorcontrib>Pezzullo, Margherita</creatorcontrib><creatorcontrib>Rossi, Mosè</creatorcontrib><creatorcontrib>Manco, Giuseppe</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Archaea (Vancouver)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mandrich, Luigi</au><au>Pezzullo, Margherita</au><au>Rossi, Mosè</au><au>Manco, Giuseppe</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>SSoNDelta and SSoNDeltalong: two thermostable esterases from the same ORF in the archaeon Sulfolobus solfataricus?</atitle><jtitle>Archaea (Vancouver)</jtitle><addtitle>Archaea</addtitle><date>2007-05</date><risdate>2007</risdate><volume>2</volume><issue>2</issue><spage>109</spage><epage>115</epage><pages>109-115</pages><issn>1472-3646</issn><abstract>Previously, we reported from the Sulfolobus solfataricus open reading frame (ORF) SSO2517 the cloning, overexpression and characterization of an esterase belonging to the hormone-sensitive lipase (HSL) family and apparently having a deletion at the N-terminus, which we named SSoNDelta. Searching the recently reported Sulfolobus acidocaldarius genome by sequence alignment, using SSO2517 as a query, allowed identity of a putative esterase (ORF SAC1105) sharing high sequence similarity (82%) with SSO2517. This esterase displays an N-terminus and total length similar to other known esterases of the HSL family. Analysis of the upstream DNA sequence of SS02517 revealed the possibility of expressing a longer version of the protein with an extended N-terminus; however, no clear translation signal consistent with a longer protein version was detected. This new version of SSO2517 was cloned, over-expressed, purified and characterized. The resulting protein, named SSoNDeltalong, was 15-fold more active with the substrate p-nitrophenyl hexanoate than SSoNDelta. Furthermore, SSoNDeltalong and SSoNDelta displayed different substrate specificities for triacylglycerols. These results and the phylogenetic relationship between S. solfataricus and S. acidocaldarius suggest a common origin of SSO2517 and SAC1105 from an ancestral gene, followed by divergent evolution. Alternatively, a yet-to-be discovered mechanism of translation that directs the expression of SSoNDeltalong under specific metabolic conditions could be hypothesized.</abstract><cop>United States</cop><pmid>17350931</pmid><tpages>7</tpages></addata></record> |
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subjects | Amino Acid Sequence Archaeal Proteins - chemistry Archaeal Proteins - genetics Archaeal Proteins - metabolism Base Sequence Carboxylesterase - chemistry Carboxylesterase - genetics Carboxylesterase - metabolism Cloning, Molecular Enzyme Stability Molecular Sequence Data Open Reading Frames Sequence Alignment Sulfolobus solfataricus - enzymology Sulfolobus solfataricus - genetics Sulfolobus solfataricus - metabolism |
title | SSoNDelta and SSoNDeltalong: two thermostable esterases from the same ORF in the archaeon Sulfolobus solfataricus? |
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