PCR-based assessment of the recovery rate of exfoliated colonocytes or cancer cells from fecal samples depends on the storage conditions after defecation
We recently developed a new methodology for isolating colonocytes from fecal samples. We then applied a DNA-based analysis to the isolated colonocytes to detect colorectal cancer cells originating from any part of the colorectum. The purpose of the present study was to determine how long after defec...
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Veröffentlicht in: | Journal of gastrointestinal and liver diseases : JGLD 2007-12, Vol.16 (4), p.369-372 |
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creator | Onouchi, Shigeki Matsushita, Hisayuki Nomura, Sayuri Minowa, Takashi Matsumura, Yasuhiro |
description | We recently developed a new methodology for isolating colonocytes from fecal samples. We then applied a DNA-based analysis to the isolated colonocytes to detect colorectal cancer cells originating from any part of the colorectum. The purpose of the present study was to determine how long after defecation and at what temperature the fecal samples should be stored to isolate the colonocytes successfully.
Fecal samples were collected from 6 patients with colorectal cancer and 6 healthy volunteers soon after defecation at the National Cancer Center Hospital. The fecal samples were stored at 4 degrees C, room temperature or 40 degrees C for 0, 24 or 48 hours. Colonocytes were then isolated from the fecal samples, and the DNA was purified. Finally, PCR for p53, K-ras and APC was conducted to determine whether the corresponding PCR products could be obtained.
The colonocyte recovery rate was not reduced, when compared with the data for successful PCR amplification, if the fecal samples were kept at 4 degrees C after defecation and if the colonocytes were isolated within 48 hours after defecation.
The present data provided important clinical knowledge regarding the storage of fecal samples for future mass screening tests. |
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Fecal samples were collected from 6 patients with colorectal cancer and 6 healthy volunteers soon after defecation at the National Cancer Center Hospital. The fecal samples were stored at 4 degrees C, room temperature or 40 degrees C for 0, 24 or 48 hours. Colonocytes were then isolated from the fecal samples, and the DNA was purified. Finally, PCR for p53, K-ras and APC was conducted to determine whether the corresponding PCR products could be obtained.
The colonocyte recovery rate was not reduced, when compared with the data for successful PCR amplification, if the fecal samples were kept at 4 degrees C after defecation and if the colonocytes were isolated within 48 hours after defecation.
The present data provided important clinical knowledge regarding the storage of fecal samples for future mass screening tests.</description><identifier>ISSN: 1841-8724</identifier><identifier>PMID: 18193116</identifier><language>eng</language><publisher>Romania</publisher><subject>Adenomatous Polyposis Coli Protein - genetics ; Biomarkers, Tumor - genetics ; Biomarkers, Tumor - metabolism ; Colorectal Neoplasms - diagnosis ; Defecation ; Diagnosis, Differential ; DNA, Neoplasm - analysis ; Enterocytes - metabolism ; Enterocytes - pathology ; Feces - cytology ; Genes, p53 - genetics ; Genes, ras - genetics ; Humans ; Polymerase Chain Reaction - methods ; Reproducibility of Results ; Retrospective Studies</subject><ispartof>Journal of gastrointestinal and liver diseases : JGLD, 2007-12, Vol.16 (4), p.369-372</ispartof><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18193116$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Onouchi, Shigeki</creatorcontrib><creatorcontrib>Matsushita, Hisayuki</creatorcontrib><creatorcontrib>Nomura, Sayuri</creatorcontrib><creatorcontrib>Minowa, Takashi</creatorcontrib><creatorcontrib>Matsumura, Yasuhiro</creatorcontrib><title>PCR-based assessment of the recovery rate of exfoliated colonocytes or cancer cells from fecal samples depends on the storage conditions after defecation</title><title>Journal of gastrointestinal and liver diseases : JGLD</title><addtitle>J Gastrointestin Liver Dis</addtitle><description>We recently developed a new methodology for isolating colonocytes from fecal samples. We then applied a DNA-based analysis to the isolated colonocytes to detect colorectal cancer cells originating from any part of the colorectum. The purpose of the present study was to determine how long after defecation and at what temperature the fecal samples should be stored to isolate the colonocytes successfully.
Fecal samples were collected from 6 patients with colorectal cancer and 6 healthy volunteers soon after defecation at the National Cancer Center Hospital. The fecal samples were stored at 4 degrees C, room temperature or 40 degrees C for 0, 24 or 48 hours. Colonocytes were then isolated from the fecal samples, and the DNA was purified. Finally, PCR for p53, K-ras and APC was conducted to determine whether the corresponding PCR products could be obtained.
The colonocyte recovery rate was not reduced, when compared with the data for successful PCR amplification, if the fecal samples were kept at 4 degrees C after defecation and if the colonocytes were isolated within 48 hours after defecation.
The present data provided important clinical knowledge regarding the storage of fecal samples for future mass screening tests.</description><subject>Adenomatous Polyposis Coli Protein - genetics</subject><subject>Biomarkers, Tumor - genetics</subject><subject>Biomarkers, Tumor - metabolism</subject><subject>Colorectal Neoplasms - diagnosis</subject><subject>Defecation</subject><subject>Diagnosis, Differential</subject><subject>DNA, Neoplasm - analysis</subject><subject>Enterocytes - metabolism</subject><subject>Enterocytes - pathology</subject><subject>Feces - cytology</subject><subject>Genes, p53 - genetics</subject><subject>Genes, ras - genetics</subject><subject>Humans</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Reproducibility of Results</subject><subject>Retrospective Studies</subject><issn>1841-8724</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo1kE1LxDAQhntQ3HX1L0hO3gpNkybpURa_YEERPZc0mWilTWomK_an-G9tdT29zMszD8wcZWuqOM2VLPkqO0V8LwohCilPshVVtGaUinX2_bh9yluNYIlGBMQBfCLBkfQGJIIJnxAnEnWCpYQvF_puHiwxoQ8-mCkBkhCJ0d7AHND3SFwMA3FgdE9QD2M_IxZG8HZG_a8ZU4j6FWaLt13qgkeiXZoFFpa9pTnLjp3uEc4Puclebq6ft3f57uH2fnu1y8eyqFPOAUpaUWGMsmBbU4i2ZVJwyWtbArN1CUJJV1dLpZwRDBSFSklouYKyZZvs8s87xvCxB0zN0OFyh_YQ9tjIoqg4Z2wGLw7gvh3ANmPsBh2n5v-Z7Ad26HMi</recordid><startdate>200712</startdate><enddate>200712</enddate><creator>Onouchi, Shigeki</creator><creator>Matsushita, Hisayuki</creator><creator>Nomura, Sayuri</creator><creator>Minowa, Takashi</creator><creator>Matsumura, Yasuhiro</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>200712</creationdate><title>PCR-based assessment of the recovery rate of exfoliated colonocytes or cancer cells from fecal samples depends on the storage conditions after defecation</title><author>Onouchi, Shigeki ; Matsushita, Hisayuki ; Nomura, Sayuri ; Minowa, Takashi ; Matsumura, Yasuhiro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p209t-4ee21516cc8dedbc06bb3764749d2e3d92e687f9564748fc63e81e587eb48e2b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Adenomatous Polyposis Coli Protein - genetics</topic><topic>Biomarkers, Tumor - genetics</topic><topic>Biomarkers, Tumor - metabolism</topic><topic>Colorectal Neoplasms - diagnosis</topic><topic>Defecation</topic><topic>Diagnosis, Differential</topic><topic>DNA, Neoplasm - analysis</topic><topic>Enterocytes - metabolism</topic><topic>Enterocytes - pathology</topic><topic>Feces - cytology</topic><topic>Genes, p53 - genetics</topic><topic>Genes, ras - genetics</topic><topic>Humans</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Reproducibility of Results</topic><topic>Retrospective Studies</topic><toplevel>online_resources</toplevel><creatorcontrib>Onouchi, Shigeki</creatorcontrib><creatorcontrib>Matsushita, Hisayuki</creatorcontrib><creatorcontrib>Nomura, Sayuri</creatorcontrib><creatorcontrib>Minowa, Takashi</creatorcontrib><creatorcontrib>Matsumura, Yasuhiro</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of gastrointestinal and liver diseases : JGLD</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Onouchi, Shigeki</au><au>Matsushita, Hisayuki</au><au>Nomura, Sayuri</au><au>Minowa, Takashi</au><au>Matsumura, Yasuhiro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>PCR-based assessment of the recovery rate of exfoliated colonocytes or cancer cells from fecal samples depends on the storage conditions after defecation</atitle><jtitle>Journal of gastrointestinal and liver diseases : JGLD</jtitle><addtitle>J Gastrointestin Liver Dis</addtitle><date>2007-12</date><risdate>2007</risdate><volume>16</volume><issue>4</issue><spage>369</spage><epage>372</epage><pages>369-372</pages><issn>1841-8724</issn><abstract>We recently developed a new methodology for isolating colonocytes from fecal samples. We then applied a DNA-based analysis to the isolated colonocytes to detect colorectal cancer cells originating from any part of the colorectum. The purpose of the present study was to determine how long after defecation and at what temperature the fecal samples should be stored to isolate the colonocytes successfully.
Fecal samples were collected from 6 patients with colorectal cancer and 6 healthy volunteers soon after defecation at the National Cancer Center Hospital. The fecal samples were stored at 4 degrees C, room temperature or 40 degrees C for 0, 24 or 48 hours. Colonocytes were then isolated from the fecal samples, and the DNA was purified. Finally, PCR for p53, K-ras and APC was conducted to determine whether the corresponding PCR products could be obtained.
The colonocyte recovery rate was not reduced, when compared with the data for successful PCR amplification, if the fecal samples were kept at 4 degrees C after defecation and if the colonocytes were isolated within 48 hours after defecation.
The present data provided important clinical knowledge regarding the storage of fecal samples for future mass screening tests.</abstract><cop>Romania</cop><pmid>18193116</pmid><tpages>4</tpages></addata></record> |
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subjects | Adenomatous Polyposis Coli Protein - genetics Biomarkers, Tumor - genetics Biomarkers, Tumor - metabolism Colorectal Neoplasms - diagnosis Defecation Diagnosis, Differential DNA, Neoplasm - analysis Enterocytes - metabolism Enterocytes - pathology Feces - cytology Genes, p53 - genetics Genes, ras - genetics Humans Polymerase Chain Reaction - methods Reproducibility of Results Retrospective Studies |
title | PCR-based assessment of the recovery rate of exfoliated colonocytes or cancer cells from fecal samples depends on the storage conditions after defecation |
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