Type 1 Cu Structure of Blue Nitrite Reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 Å Resolution: Comparison of Blue and Green Nitrite Reductases
The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 Å resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue e...
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| Veröffentlicht in: | Journal of biochemistry (Tokyo) 1998-11, Vol.124 (5), p.876-879 |
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| container_issue | 5 |
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| container_title | Journal of biochemistry (Tokyo) |
| container_volume | 124 |
| creator | Inoue, Tsuyoshi Gotowda, Masaharu Deligeer Kataoka, Kunishige Yamaguchi, Kazuya Suzuki, Shinnichiro Watanabe, Hirotaka Gohow, Manabu Kai, Yasushi |
| description | The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 Å resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met160 side chain differed. The deviation of the S3(Met150) atom from the axial position of the NNS plane formed by two N3(His95 and His145) and one Sβ(Cysl36) atom caused the difference in the colors of the enzymes, i.e. blue and green. |
| doi_str_mv | 10.1093/oxfordjournals.jbchem.a022201 |
| format | Article |
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AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met160 side chain differed. The deviation of the S3(Met150) atom from the axial position of the NNS plane formed by two N3(His95 and His145) and one Sβ(Cysl36) atom caused the difference in the colors of the enzymes, i.e. blue and green.</description><identifier>ISSN: 0021-924X</identifier><identifier>DOI: 10.1093/oxfordjournals.jbchem.a022201</identifier><identifier>PMID: 9792907</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Alcaligenes - enzymology ; Alcaligenes xylosoxidans GIFU ; Copper - chemistry ; Crystallography, X-Ray ; Isoenzymes - chemistry ; nitrite reductase ; Nitrite Reductases - chemistry ; Protein Conformation ; three-dimensional structure ; type 1 copper ; X-ray crystal analysis</subject><ispartof>Journal of biochemistry (Tokyo), 1998-11, Vol.124 (5), p.876-879</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c273t-84a8e4535762d2cead0758d199bfae59a065f8d67d1dd4ccc5b6427b66b84e4c3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9792907$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Inoue, Tsuyoshi</creatorcontrib><creatorcontrib>Gotowda, Masaharu</creatorcontrib><creatorcontrib>Deligeer</creatorcontrib><creatorcontrib>Kataoka, Kunishige</creatorcontrib><creatorcontrib>Yamaguchi, Kazuya</creatorcontrib><creatorcontrib>Suzuki, Shinnichiro</creatorcontrib><creatorcontrib>Watanabe, Hirotaka</creatorcontrib><creatorcontrib>Gohow, Manabu</creatorcontrib><creatorcontrib>Kai, Yasushi</creatorcontrib><title>Type 1 Cu Structure of Blue Nitrite Reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 Å Resolution: Comparison of Blue and Green Nitrite Reductases</title><title>Journal of biochemistry (Tokyo)</title><addtitle>J Biochem</addtitle><description>The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 Å resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met160 side chain differed. The deviation of the S3(Met150) atom from the axial position of the NNS plane formed by two N3(His95 and His145) and one Sβ(Cysl36) atom caused the difference in the colors of the enzymes, i.e. blue and green.</description><subject>Alcaligenes - enzymology</subject><subject>Alcaligenes xylosoxidans GIFU</subject><subject>Copper - chemistry</subject><subject>Crystallography, X-Ray</subject><subject>Isoenzymes - chemistry</subject><subject>nitrite reductase</subject><subject>Nitrite Reductases - chemistry</subject><subject>Protein Conformation</subject><subject>three-dimensional structure</subject><subject>type 1 copper</subject><subject>X-ray crystal analysis</subject><issn>0021-924X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNplkc1u1DAUhb0AlVJ4BCRvYJfBdmI7QWJRImZaqYBEW1R1Yzn2DXhI4ql_pJkH4C14G16MVDMaCbG6ujrn3KOrD6HXlCwoacq3ftv7YNc-h0kPcbHuzA8YF5owxgh9gk4JYbRoWHX3DD2Pcf24srI8QSeNbFhD5Cn6fbPbAKa4zfg6hWxSDoB9jz8MGfBnl4JLgL-CnRUdAffBj_h8MHpw32GCiLe7wUe_dVZPEa8ul7eYEk6xTpgtCMd_fs3h6IecnJ_e4daPGx1c9NOxQ08WrwLA9H9bfIGe9vNf8PIwz9Dt8uNNe1FcfVldtudXhWGyTEVd6RoqXnIpmGUGtCWS15Y2Tddr4I0mgve1FdJSaytjDO9ExWQnRFdXUJnyDL3Z390E_5AhJjW6aGAY9AQ-RyUJoaImfDa-3xtN8DEG6NUmuFGHnaJEPRJR_xJReyLqQGTOvzoU5W4Ee0wfcMx6sdddTLA9yjr8VEKWkquLu3vVLK_vv31qKyXKvwI4oiY</recordid><startdate>199811</startdate><enddate>199811</enddate><creator>Inoue, Tsuyoshi</creator><creator>Gotowda, Masaharu</creator><creator>Deligeer</creator><creator>Kataoka, Kunishige</creator><creator>Yamaguchi, Kazuya</creator><creator>Suzuki, Shinnichiro</creator><creator>Watanabe, Hirotaka</creator><creator>Gohow, Manabu</creator><creator>Kai, Yasushi</creator><general>Oxford University Press</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>199811</creationdate><title>Type 1 Cu Structure of Blue Nitrite Reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 Å Resolution: Comparison of Blue and Green Nitrite Reductases</title><author>Inoue, Tsuyoshi ; Gotowda, Masaharu ; Deligeer ; Kataoka, Kunishige ; Yamaguchi, Kazuya ; Suzuki, Shinnichiro ; Watanabe, Hirotaka ; Gohow, Manabu ; Kai, Yasushi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c273t-84a8e4535762d2cead0758d199bfae59a065f8d67d1dd4ccc5b6427b66b84e4c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Alcaligenes - enzymology</topic><topic>Alcaligenes xylosoxidans GIFU</topic><topic>Copper - chemistry</topic><topic>Crystallography, X-Ray</topic><topic>Isoenzymes - chemistry</topic><topic>nitrite reductase</topic><topic>Nitrite Reductases - chemistry</topic><topic>Protein Conformation</topic><topic>three-dimensional structure</topic><topic>type 1 copper</topic><topic>X-ray crystal analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Inoue, Tsuyoshi</creatorcontrib><creatorcontrib>Gotowda, Masaharu</creatorcontrib><creatorcontrib>Deligeer</creatorcontrib><creatorcontrib>Kataoka, Kunishige</creatorcontrib><creatorcontrib>Yamaguchi, Kazuya</creatorcontrib><creatorcontrib>Suzuki, Shinnichiro</creatorcontrib><creatorcontrib>Watanabe, Hirotaka</creatorcontrib><creatorcontrib>Gohow, Manabu</creatorcontrib><creatorcontrib>Kai, Yasushi</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of biochemistry (Tokyo)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Inoue, Tsuyoshi</au><au>Gotowda, Masaharu</au><au>Deligeer</au><au>Kataoka, Kunishige</au><au>Yamaguchi, Kazuya</au><au>Suzuki, Shinnichiro</au><au>Watanabe, Hirotaka</au><au>Gohow, Manabu</au><au>Kai, Yasushi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Type 1 Cu Structure of Blue Nitrite Reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 Å Resolution: Comparison of Blue and Green Nitrite Reductases</atitle><jtitle>Journal of biochemistry (Tokyo)</jtitle><addtitle>J Biochem</addtitle><date>1998-11</date><risdate>1998</risdate><volume>124</volume><issue>5</issue><spage>876</spage><epage>879</epage><pages>876-879</pages><issn>0021-924X</issn><abstract>The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 Å resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met160 side chain differed. The deviation of the S3(Met150) atom from the axial position of the NNS plane formed by two N3(His95 and His145) and one Sβ(Cysl36) atom caused the difference in the colors of the enzymes, i.e. blue and green.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>9792907</pmid><doi>10.1093/oxfordjournals.jbchem.a022201</doi><tpages>4</tpages></addata></record> |
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| language | eng |
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| source | J-STAGE Free; Oxford University Press Journals All Titles (1996-Current); MEDLINE; Free Full-Text Journals in Chemistry |
| subjects | Alcaligenes - enzymology Alcaligenes xylosoxidans GIFU Copper - chemistry Crystallography, X-Ray Isoenzymes - chemistry nitrite reductase Nitrite Reductases - chemistry Protein Conformation three-dimensional structure type 1 copper X-ray crystal analysis |
| title | Type 1 Cu Structure of Blue Nitrite Reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 Å Resolution: Comparison of Blue and Green Nitrite Reductases |
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