Genotyping of the three major allelic variants of the human mannose-binding lectin gene by denaturing gradient gel electrophoresis
The three major allelic variants of the mannose‐binding lectin gene are responsible for structural defects leading to immune deficiency. The corresponding mutations are all located within exon 1 and result in amino acid substitutions in the collagenous region of the protein, which is involved in the...
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Veröffentlicht in: | Human mutation 1999, Vol.14 (1), p.80-83 |
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description | The three major allelic variants of the mannose‐binding lectin gene are responsible for structural defects leading to immune deficiency. The corresponding mutations are all located within exon 1 and result in amino acid substitutions in the collagenous region of the protein, which is involved in the oligomerization process. We have developed a simple and efficient strategy that permits simultaneous genotyping of these known allelic variants of the MBL gene by means of a single polymerase chain reaction (PCR) reaction followed by a denaturing gradient gel electrophoresis (DGGE). In addition, this procedure also allows for screening novel alleles due to mutations located elsewhere in the analyzed segment of the gene. During this study, we identified a previously undescribed nucleotide change in exon 1 at codon 44. Hum Mutat 14:80–83, 1999. © 1999 Wiley‐Liss, Inc. |
doi_str_mv | 10.1002/(SICI)1098-1004(1999)14:1<80::AID-HUMU10>3.0.CO;2-J |
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The corresponding mutations are all located within exon 1 and result in amino acid substitutions in the collagenous region of the protein, which is involved in the oligomerization process. We have developed a simple and efficient strategy that permits simultaneous genotyping of these known allelic variants of the MBL gene by means of a single polymerase chain reaction (PCR) reaction followed by a denaturing gradient gel electrophoresis (DGGE). In addition, this procedure also allows for screening novel alleles due to mutations located elsewhere in the analyzed segment of the gene. During this study, we identified a previously undescribed nucleotide change in exon 1 at codon 44. Hum Mutat 14:80–83, 1999. © 1999 Wiley‐Liss, Inc.</description><identifier>ISSN: 1059-7794</identifier><identifier>EISSN: 1098-1004</identifier><identifier>DOI: 10.1002/(SICI)1098-1004(1999)14:1<80::AID-HUMU10>3.0.CO;2-J</identifier><identifier>PMID: 10447262</identifier><language>eng</language><publisher>New York: John Wiley & Sons, Inc</publisher><subject>Alleles ; Carrier Proteins - genetics ; Collectins ; denaturing gradient gel electrophoresis (DGGE) ; Electrophoresis, Agar Gel - methods ; Genetic Predisposition to Disease ; Genetic Variation ; Genotype ; genotyping ; Humans ; mannose-binding lectin ; MBL ; MBL2 ; Polymerase Chain Reaction - methods</subject><ispartof>Human mutation, 1999, Vol.14 (1), p.80-83</ispartof><rights>Copyright © 1999 Wiley‐Liss, Inc.</rights><rights>Copyright © 1999 Wiley-Liss, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c5320-c49d99c90fae345d3fac9d4e7716f10939228808324f366516458cb68876892f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2F%28SICI%291098-1004%281999%2914%3A1%3C80%3A%3AAID-HUMU10%3E3.0.CO%3B2-J$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2F%28SICI%291098-1004%281999%2914%3A1%3C80%3A%3AAID-HUMU10%3E3.0.CO%3B2-J$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>315,781,785,1418,4025,27928,27929,27930,45579,45580</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10447262$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gabolde, Martine</creatorcontrib><creatorcontrib>Muralitharan, Shanmugakonar</creatorcontrib><creatorcontrib>Besmond, Claude</creatorcontrib><title>Genotyping of the three major allelic variants of the human mannose-binding lectin gene by denaturing gradient gel electrophoresis</title><title>Human mutation</title><addtitle>Hum. Mutat</addtitle><description>The three major allelic variants of the mannose‐binding lectin gene are responsible for structural defects leading to immune deficiency. The corresponding mutations are all located within exon 1 and result in amino acid substitutions in the collagenous region of the protein, which is involved in the oligomerization process. We have developed a simple and efficient strategy that permits simultaneous genotyping of these known allelic variants of the MBL gene by means of a single polymerase chain reaction (PCR) reaction followed by a denaturing gradient gel electrophoresis (DGGE). In addition, this procedure also allows for screening novel alleles due to mutations located elsewhere in the analyzed segment of the gene. During this study, we identified a previously undescribed nucleotide change in exon 1 at codon 44. Hum Mutat 14:80–83, 1999. © 1999 Wiley‐Liss, Inc.</description><subject>Alleles</subject><subject>Carrier Proteins - genetics</subject><subject>Collectins</subject><subject>denaturing gradient gel electrophoresis (DGGE)</subject><subject>Electrophoresis, Agar Gel - methods</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetic Variation</subject><subject>Genotype</subject><subject>genotyping</subject><subject>Humans</subject><subject>mannose-binding lectin</subject><subject>MBL</subject><subject>MBL2</subject><subject>Polymerase Chain Reaction - methods</subject><issn>1059-7794</issn><issn>1098-1004</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkVFv0zAUhSMEYmPwF1DEA9oeUuzYTuIOIY0CXadBJboCb1ductO6S5xiJ0Bf-eU4aqkQIHiwrq_96RxfnyA4p2RACYmfnc4mo8kZJTKLfM9PqZTyjPIhfZ6R4fBi8iq6nL-dU_KCDchgND2Po6s7wfGBv9vvhYzSVPKj4IFza0JIJgS7HxxRwnkaJ_Fx8H2Mpmm3G22WYVOG7Qr9sohhrdaNDVVVYaXz8IuyWpnW_WRWXa2MZ4xpHEYLbYpeoMK81SZcosFwsQ0LNKrtbH-ztKrQaFp_V4XYc7bZrBqLTruHwb1SVQ4f7etJMH_z-mZ0GV1Px5PRxXWUCxaTKOeykDKXpFTIuChYqXJZcExTmpR-aibjOMtIxmJesiQRNOEiyxdJlqVJJuOSnQRPd7ob23zu0LVQa5djVSmDTecgkVLIRPD_gjRlVCRCevDJb-C66azxQwCVqX-NZNRDsx2U28Y5iyVsrK6V3QIl0AcN0AcNfXB9z6EPGqivkBEAHzTsggYGBEZTiOHKqz7eW3eLGotfNHfJssMvftUVbv_w_JflXx33J1432ulq1-K3g66yt5CkLBXw8d0Y4vTle_HpZgYf2A9AQdLK</recordid><startdate>1999</startdate><enddate>1999</enddate><creator>Gabolde, Martine</creator><creator>Muralitharan, Shanmugakonar</creator><creator>Besmond, Claude</creator><general>John Wiley & Sons, Inc</general><general>Hindawi Limited</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QP</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>1999</creationdate><title>Genotyping of the three major allelic variants of the human mannose-binding lectin gene by denaturing gradient gel electrophoresis</title><author>Gabolde, Martine ; Muralitharan, Shanmugakonar ; Besmond, Claude</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5320-c49d99c90fae345d3fac9d4e7716f10939228808324f366516458cb68876892f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Alleles</topic><topic>Carrier Proteins - genetics</topic><topic>Collectins</topic><topic>denaturing gradient gel electrophoresis (DGGE)</topic><topic>Electrophoresis, Agar Gel - methods</topic><topic>Genetic Predisposition to Disease</topic><topic>Genetic Variation</topic><topic>Genotype</topic><topic>genotyping</topic><topic>Humans</topic><topic>mannose-binding lectin</topic><topic>MBL</topic><topic>MBL2</topic><topic>Polymerase Chain Reaction - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gabolde, Martine</creatorcontrib><creatorcontrib>Muralitharan, Shanmugakonar</creatorcontrib><creatorcontrib>Besmond, Claude</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Access via ProQuest (Open Access)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Human mutation</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gabolde, Martine</au><au>Muralitharan, Shanmugakonar</au><au>Besmond, Claude</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genotyping of the three major allelic variants of the human mannose-binding lectin gene by denaturing gradient gel electrophoresis</atitle><jtitle>Human mutation</jtitle><addtitle>Hum. Mutat</addtitle><date>1999</date><risdate>1999</risdate><volume>14</volume><issue>1</issue><spage>80</spage><epage>83</epage><pages>80-83</pages><issn>1059-7794</issn><eissn>1098-1004</eissn><abstract>The three major allelic variants of the mannose‐binding lectin gene are responsible for structural defects leading to immune deficiency. The corresponding mutations are all located within exon 1 and result in amino acid substitutions in the collagenous region of the protein, which is involved in the oligomerization process. We have developed a simple and efficient strategy that permits simultaneous genotyping of these known allelic variants of the MBL gene by means of a single polymerase chain reaction (PCR) reaction followed by a denaturing gradient gel electrophoresis (DGGE). In addition, this procedure also allows for screening novel alleles due to mutations located elsewhere in the analyzed segment of the gene. During this study, we identified a previously undescribed nucleotide change in exon 1 at codon 44. Hum Mutat 14:80–83, 1999. © 1999 Wiley‐Liss, Inc.</abstract><cop>New York</cop><pub>John Wiley & Sons, Inc</pub><pmid>10447262</pmid><doi>10.1002/(SICI)1098-1004(1999)14:1<80::AID-HUMU10>3.0.CO;2-J</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alleles Carrier Proteins - genetics Collectins denaturing gradient gel electrophoresis (DGGE) Electrophoresis, Agar Gel - methods Genetic Predisposition to Disease Genetic Variation Genotype genotyping Humans mannose-binding lectin MBL MBL2 Polymerase Chain Reaction - methods |
title | Genotyping of the three major allelic variants of the human mannose-binding lectin gene by denaturing gradient gel electrophoresis |
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