Evolution of the Ribosomal RNA Internal Transcribed Spacer One (ITS-1) in Cichlid Fishes of the Lake Victoria Region
The nucleotide sequences of the first internal transcribed spacer (ITS-1) of the ribosomal RNA gene cluster have been determined for 11 species of closely related endemic cichlid fishes of the Lake Victoria region (LVR) and 6 related East African cichlids. The ITS-1 sequences confirmed independently...
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Veröffentlicht in: | Molecular phylogenetics and evolution 1999-03, Vol.11 (2), p.273-282 |
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creator | Booton, Gregory C. Kaufman, Les Chandler, Mark Oguto-Ohwayo, Richard Duan, Wenrui Fuerst, Paul A. |
description | The nucleotide sequences of the first internal transcribed spacer (ITS-1) of the ribosomal RNA gene cluster have been determined for 11 species of closely related endemic cichlid fishes of the Lake Victoria region (LVR) and 6 related East African cichlids. The ITS-1 sequences confirmed independently derived basal phylogenies, but provide limited insight within this species flock. The line leading toPseudocrenilabrus multicolorarose early, close to the divergence event that separated the tilapiine and haplochromine tribes of the “African Group” of the family Cichlidae. In this phylogeny,Astatoreochromis alluaudiand the riverineAstatotilapia burtoniare sister taxa, which together are a sister group to a monophyletic assemblage including both Lake Victoria and Lake Edward taxa. The ITS-1 data support the monophyly of haplochromine genera across lakes. Since Lake Victoria is believed to have been dry between 14,500 and 12,400 BPE, the modern assemblage must have been derived from reinvasion by the products of earlier cladogenesis events. Thus, although the regional superflock is monophyletic, the haplochromines of Lake Victoria itself did not evolvein situfrom a single ancestor. |
doi_str_mv | 10.1006/mpev.1998.0576 |
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The ITS-1 sequences confirmed independently derived basal phylogenies, but provide limited insight within this species flock. The line leading toPseudocrenilabrus multicolorarose early, close to the divergence event that separated the tilapiine and haplochromine tribes of the “African Group” of the family Cichlidae. In this phylogeny,Astatoreochromis alluaudiand the riverineAstatotilapia burtoniare sister taxa, which together are a sister group to a monophyletic assemblage including both Lake Victoria and Lake Edward taxa. The ITS-1 data support the monophyly of haplochromine genera across lakes. Since Lake Victoria is believed to have been dry between 14,500 and 12,400 BPE, the modern assemblage must have been derived from reinvasion by the products of earlier cladogenesis events. Thus, although the regional superflock is monophyletic, the haplochromines of Lake Victoria itself did not evolvein situfrom a single ancestor.</description><identifier>ISSN: 1055-7903</identifier><identifier>EISSN: 1095-9513</identifier><identifier>DOI: 10.1006/mpev.1998.0576</identifier><identifier>PMID: 10191071</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Africa, Eastern ; Animals ; Base Sequence ; cichlid ; evolution ; Evolution, Molecular ; Fresh Water ; Genetic Variation ; Genetics, Population ; ITS-1 ; Lake Victoria ; Models, Biological ; Molecular Sequence Data ; Perches - genetics ; RNA, Ribosomal - genetics ; RNA, Ribosomal, 18S ; RNA, Ribosomal, 5.8S ; rRNA</subject><ispartof>Molecular phylogenetics and evolution, 1999-03, Vol.11 (2), p.273-282</ispartof><rights>1999 Academic Press</rights><rights>Copyright 1999 Academic Press.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-6e8ce551947070ca636a81bc2868e6c3143825879bbd19d689e64f914a6d935e3</citedby><cites>FETCH-LOGICAL-c406t-6e8ce551947070ca636a81bc2868e6c3143825879bbd19d689e64f914a6d935e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1055790398905760$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65534</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10191071$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Booton, Gregory C.</creatorcontrib><creatorcontrib>Kaufman, Les</creatorcontrib><creatorcontrib>Chandler, Mark</creatorcontrib><creatorcontrib>Oguto-Ohwayo, Richard</creatorcontrib><creatorcontrib>Duan, Wenrui</creatorcontrib><creatorcontrib>Fuerst, Paul A.</creatorcontrib><title>Evolution of the Ribosomal RNA Internal Transcribed Spacer One (ITS-1) in Cichlid Fishes of the Lake Victoria Region</title><title>Molecular phylogenetics and evolution</title><addtitle>Mol Phylogenet Evol</addtitle><description>The nucleotide sequences of the first internal transcribed spacer (ITS-1) of the ribosomal RNA gene cluster have been determined for 11 species of closely related endemic cichlid fishes of the Lake Victoria region (LVR) and 6 related East African cichlids. The ITS-1 sequences confirmed independently derived basal phylogenies, but provide limited insight within this species flock. The line leading toPseudocrenilabrus multicolorarose early, close to the divergence event that separated the tilapiine and haplochromine tribes of the “African Group” of the family Cichlidae. In this phylogeny,Astatoreochromis alluaudiand the riverineAstatotilapia burtoniare sister taxa, which together are a sister group to a monophyletic assemblage including both Lake Victoria and Lake Edward taxa. The ITS-1 data support the monophyly of haplochromine genera across lakes. Since Lake Victoria is believed to have been dry between 14,500 and 12,400 BPE, the modern assemblage must have been derived from reinvasion by the products of earlier cladogenesis events. Thus, although the regional superflock is monophyletic, the haplochromines of Lake Victoria itself did not evolvein situfrom a single ancestor.</description><subject>Africa, Eastern</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>cichlid</subject><subject>evolution</subject><subject>Evolution, Molecular</subject><subject>Fresh Water</subject><subject>Genetic Variation</subject><subject>Genetics, Population</subject><subject>ITS-1</subject><subject>Lake Victoria</subject><subject>Models, Biological</subject><subject>Molecular Sequence Data</subject><subject>Perches - genetics</subject><subject>RNA, Ribosomal - genetics</subject><subject>RNA, Ribosomal, 18S</subject><subject>RNA, Ribosomal, 5.8S</subject><subject>rRNA</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kE1LAzEQhoMofl89Sk6ih60Zd5NNjlKqFoqFtnoN2ezURnc3NdkW_PfuUgUvnmYGnnmHeQi5ADYAxsRtvcbtAJSSA8ZzsUeOgSmeKA7pft9znuSKpUfkJMZ3xgC44ofkCBgoYDkck3a09dWmdb6hfknbFdKZK3z0tano7PmejpsWQ9MNi2CaaIMrsKTztbEY6LRBej1ezBO4oa6hQ2dXlSvpg4srjL9xE_OB9NXZ1gdn6AzfulNn5GBpqojnP_WUvDyMFsOnZDJ9HA_vJ4nNmGgTgdIi56CynOXMGpEKI6Gwd1JIFDaFLJV3XOaqKEpQpZAKRbZUkBlRqpRjekqudrnr4D83GFtdu2ixqkyDfhO1UCLPQKgOHOxAG3yMAZd6HVxtwpcGpnvPuvese8-699wtXP4kb4oayz_4TmwHyB2A3X9bh0FH67CxWLqAttWld_9lfwPLbIrK</recordid><startdate>199903</startdate><enddate>199903</enddate><creator>Booton, Gregory C.</creator><creator>Kaufman, Les</creator><creator>Chandler, Mark</creator><creator>Oguto-Ohwayo, Richard</creator><creator>Duan, Wenrui</creator><creator>Fuerst, Paul A.</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>199903</creationdate><title>Evolution of the Ribosomal RNA Internal Transcribed Spacer One (ITS-1) in Cichlid Fishes of the Lake Victoria Region</title><author>Booton, Gregory C. ; Kaufman, Les ; Chandler, Mark ; Oguto-Ohwayo, Richard ; Duan, Wenrui ; Fuerst, Paul A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-6e8ce551947070ca636a81bc2868e6c3143825879bbd19d689e64f914a6d935e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Africa, Eastern</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>cichlid</topic><topic>evolution</topic><topic>Evolution, Molecular</topic><topic>Fresh Water</topic><topic>Genetic Variation</topic><topic>Genetics, Population</topic><topic>ITS-1</topic><topic>Lake Victoria</topic><topic>Models, Biological</topic><topic>Molecular Sequence Data</topic><topic>Perches - genetics</topic><topic>RNA, Ribosomal - genetics</topic><topic>RNA, Ribosomal, 18S</topic><topic>RNA, Ribosomal, 5.8S</topic><topic>rRNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Booton, Gregory C.</creatorcontrib><creatorcontrib>Kaufman, Les</creatorcontrib><creatorcontrib>Chandler, Mark</creatorcontrib><creatorcontrib>Oguto-Ohwayo, Richard</creatorcontrib><creatorcontrib>Duan, Wenrui</creatorcontrib><creatorcontrib>Fuerst, Paul A.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Booton, Gregory C.</au><au>Kaufman, Les</au><au>Chandler, Mark</au><au>Oguto-Ohwayo, Richard</au><au>Duan, Wenrui</au><au>Fuerst, Paul A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evolution of the Ribosomal RNA Internal Transcribed Spacer One (ITS-1) in Cichlid Fishes of the Lake Victoria Region</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>1999-03</date><risdate>1999</risdate><volume>11</volume><issue>2</issue><spage>273</spage><epage>282</epage><pages>273-282</pages><issn>1055-7903</issn><eissn>1095-9513</eissn><abstract>The nucleotide sequences of the first internal transcribed spacer (ITS-1) of the ribosomal RNA gene cluster have been determined for 11 species of closely related endemic cichlid fishes of the Lake Victoria region (LVR) and 6 related East African cichlids. The ITS-1 sequences confirmed independently derived basal phylogenies, but provide limited insight within this species flock. The line leading toPseudocrenilabrus multicolorarose early, close to the divergence event that separated the tilapiine and haplochromine tribes of the “African Group” of the family Cichlidae. In this phylogeny,Astatoreochromis alluaudiand the riverineAstatotilapia burtoniare sister taxa, which together are a sister group to a monophyletic assemblage including both Lake Victoria and Lake Edward taxa. The ITS-1 data support the monophyly of haplochromine genera across lakes. Since Lake Victoria is believed to have been dry between 14,500 and 12,400 BPE, the modern assemblage must have been derived from reinvasion by the products of earlier cladogenesis events. Thus, although the regional superflock is monophyletic, the haplochromines of Lake Victoria itself did not evolvein situfrom a single ancestor.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>10191071</pmid><doi>10.1006/mpev.1998.0576</doi><tpages>10</tpages></addata></record> |
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subjects | Africa, Eastern Animals Base Sequence cichlid evolution Evolution, Molecular Fresh Water Genetic Variation Genetics, Population ITS-1 Lake Victoria Models, Biological Molecular Sequence Data Perches - genetics RNA, Ribosomal - genetics RNA, Ribosomal, 18S RNA, Ribosomal, 5.8S rRNA |
title | Evolution of the Ribosomal RNA Internal Transcribed Spacer One (ITS-1) in Cichlid Fishes of the Lake Victoria Region |
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