Growth of Trametes versicolor on phenol
Trametes versicolor 1 was shown to grow on phenol as its sole carbon and energy source. The culture growth and degradation ability dependence on culture medium pH value was observed. The optimal pH value of a liquid Czapek salt medium was 6.5. The investigated strain utilized completely 0.5 g/l phen...
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| Veröffentlicht in: | Journal of industrial microbiology & biotechnology 2008-11, Vol.35 (11), p.1309-1312 |
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| creator | Yemendzhiev, H Gerginova, M Krastanov, A Stoilova, I Alexieva, Z |
| description | Trametes versicolor 1 was shown to grow on phenol as its sole carbon and energy source. The culture growth and degradation ability dependence on culture medium pH value was observed. The optimal pH value of a liquid Czapek salt medium was 6.5. The investigated strain utilized completely 0.5 g/l phenol in 6 days. The dynamics of the phenol degradation process was investigated. The process was characterized by specific growth rate μmax 0.33 h⁻¹, metabolic coefficient k = 4.4, yield coefficient Y x/s = 0.23 and rate of degradation Q = 0.506 h⁻¹. The intracellular activities of phenol hydroxylase (0.333 U/mg protein) and cis,cis-muconate lactonizing enzyme (0.41 U/mg protein) were demonstrated for the first time in this fungus. In an attempt to estimate the occurrence of gene sequences in T. versicolor 1 related to phenol degradation pathway a dot blot analysis with total DNA isolated from this strain was performed. Two synthetic oligonucleotides were used as hybridizing probes. One of the probes was homologous to the 5'end of phyA gene coding for phenol hydroxylase in Trichosporon cutaneum ATCC 46490. The other probe was created on the basis of cis,cis-muconate lactonizing enzyme coding gene in T. cutaneum ATCC 58094. The results of these investigations showed that T. versicolor 1 may carry genes similar to those of Trichosporon cutaneum capable to degrade phenol. |
| doi_str_mv | 10.1007/s10295-008-0412-z |
| format | Article |
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The culture growth and degradation ability dependence on culture medium pH value was observed. The optimal pH value of a liquid Czapek salt medium was 6.5. The investigated strain utilized completely 0.5 g/l phenol in 6 days. The dynamics of the phenol degradation process was investigated. The process was characterized by specific growth rate μmax 0.33 h⁻¹, metabolic coefficient k = 4.4, yield coefficient Y x/s = 0.23 and rate of degradation Q = 0.506 h⁻¹. The intracellular activities of phenol hydroxylase (0.333 U/mg protein) and cis,cis-muconate lactonizing enzyme (0.41 U/mg protein) were demonstrated for the first time in this fungus. In an attempt to estimate the occurrence of gene sequences in T. versicolor 1 related to phenol degradation pathway a dot blot analysis with total DNA isolated from this strain was performed. Two synthetic oligonucleotides were used as hybridizing probes. One of the probes was homologous to the 5'end of phyA gene coding for phenol hydroxylase in Trichosporon cutaneum ATCC 46490. The other probe was created on the basis of cis,cis-muconate lactonizing enzyme coding gene in T. cutaneum ATCC 58094. The results of these investigations showed that T. versicolor 1 may carry genes similar to those of Trichosporon cutaneum capable to degrade phenol.</description><identifier>ISSN: 1367-5435</identifier><identifier>EISSN: 1476-5535</identifier><identifier>DOI: 10.1007/s10295-008-0412-z</identifier><identifier>PMID: 18712560</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Biochemistry ; Biodegradation ; Bioinformatics ; Biological and medical sciences ; Biomedical and Life Sciences ; Bioremediation ; Biotechnology ; Carbon ; Cellular biology ; Coriolus versicolor ; culture media ; Energy sources ; Enzymes ; Fundamental and applied biological sciences. Psychology ; Fungal Proteins - genetics ; Fungal Proteins - metabolism ; Fungi ; Genetic Engineering ; Genetic testing ; Hybridization ; Inorganic Chemistry ; Investigations ; Labeling ; Life Sciences ; Lignin ; microbial growth ; microbial physiology ; Microbiology ; Microorganisms ; Mixed Function Oxygenases - genetics ; Mixed Function Oxygenases - metabolism ; Original Paper ; Phenol - metabolism ; Phenols ; Pollutants ; Probes ; Proteins ; Studies ; Trametes - enzymology ; Trametes - genetics ; Trametes - growth & development ; Trametes - metabolism ; Trametes versicolor ; Trichosporon cutaneum ; white-rot fungi</subject><ispartof>Journal of industrial microbiology & biotechnology, 2008-11, Vol.35 (11), p.1309-1312</ispartof><rights>Society for Industrial Microbiology 2008</rights><rights>2009 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c497t-59420d1fdea44bfc28ef0da739f32c327fbd4f5cd555d628ae0cc55161c20f8a3</citedby><cites>FETCH-LOGICAL-c497t-59420d1fdea44bfc28ef0da739f32c327fbd4f5cd555d628ae0cc55161c20f8a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10295-008-0412-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10295-008-0412-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>309,310,314,780,784,789,790,23930,23931,25140,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20837809$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18712560$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yemendzhiev, H</creatorcontrib><creatorcontrib>Gerginova, M</creatorcontrib><creatorcontrib>Krastanov, A</creatorcontrib><creatorcontrib>Stoilova, I</creatorcontrib><creatorcontrib>Alexieva, Z</creatorcontrib><title>Growth of Trametes versicolor on phenol</title><title>Journal of industrial microbiology & biotechnology</title><addtitle>J Ind Microbiol Biotechnol</addtitle><addtitle>J Ind Microbiol Biotechnol</addtitle><description>Trametes versicolor 1 was shown to grow on phenol as its sole carbon and energy source. The culture growth and degradation ability dependence on culture medium pH value was observed. The optimal pH value of a liquid Czapek salt medium was 6.5. The investigated strain utilized completely 0.5 g/l phenol in 6 days. The dynamics of the phenol degradation process was investigated. The process was characterized by specific growth rate μmax 0.33 h⁻¹, metabolic coefficient k = 4.4, yield coefficient Y x/s = 0.23 and rate of degradation Q = 0.506 h⁻¹. The intracellular activities of phenol hydroxylase (0.333 U/mg protein) and cis,cis-muconate lactonizing enzyme (0.41 U/mg protein) were demonstrated for the first time in this fungus. In an attempt to estimate the occurrence of gene sequences in T. versicolor 1 related to phenol degradation pathway a dot blot analysis with total DNA isolated from this strain was performed. Two synthetic oligonucleotides were used as hybridizing probes. One of the probes was homologous to the 5'end of phyA gene coding for phenol hydroxylase in Trichosporon cutaneum ATCC 46490. The other probe was created on the basis of cis,cis-muconate lactonizing enzyme coding gene in T. cutaneum ATCC 58094. The results of these investigations showed that T. versicolor 1 may carry genes similar to those of Trichosporon cutaneum capable to degrade phenol.</description><subject>Biochemistry</subject><subject>Biodegradation</subject><subject>Bioinformatics</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Bioremediation</subject><subject>Biotechnology</subject><subject>Carbon</subject><subject>Cellular biology</subject><subject>Coriolus versicolor</subject><subject>culture media</subject><subject>Energy sources</subject><subject>Enzymes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Fungal Proteins - genetics</subject><subject>Fungal Proteins - metabolism</subject><subject>Fungi</subject><subject>Genetic Engineering</subject><subject>Genetic testing</subject><subject>Hybridization</subject><subject>Inorganic Chemistry</subject><subject>Investigations</subject><subject>Labeling</subject><subject>Life Sciences</subject><subject>Lignin</subject><subject>microbial growth</subject><subject>microbial physiology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Mixed Function Oxygenases - genetics</subject><subject>Mixed Function Oxygenases - metabolism</subject><subject>Original Paper</subject><subject>Phenol - metabolism</subject><subject>Phenols</subject><subject>Pollutants</subject><subject>Probes</subject><subject>Proteins</subject><subject>Studies</subject><subject>Trametes - enzymology</subject><subject>Trametes - genetics</subject><subject>Trametes - growth & development</subject><subject>Trametes - metabolism</subject><subject>Trametes versicolor</subject><subject>Trichosporon cutaneum</subject><subject>white-rot fungi</subject><issn>1367-5435</issn><issn>1476-5535</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkE1LAzEURYMofv8ANzoI6mr05XtmKUWrUHBhuw5pJmkr00lNOor99aZMseBCVwnk3Jd3D0JnGG4xgLyLGEjJc4AiB4ZJvtpBh5hJkXNO-W66UyFzzig_QEcxvgEAl5LsowNcSEy4gEN00w_-cznNvMuGQc_t0sbsw4Y4M772IfNNtpjaxtcnaM_pOtrTzXmMRo8Pw95TPnjpP_fuB7lhpVzmvGQEKuwqqxkbO0MK66DSkpaOEkOJdOOKOW4qznklSKEtGMM5FtgQcIWmx-i6m7sI_r21canms2hsXevG-jYqUQqRSot_QYJJKQugCbz8Bb75NjSphCKUYxDAIEG4g0zwMQbr1CLM5jp8KQxq7Vp1rlVyrdau1SplzjeD2_HcVtvERm4CrjaAjkbXLujGzOIPR6CgacMycaTjYnpqJjZsN_zr94su5LRXehLS4NErAUwBJ58sNf8G5RGeMQ</recordid><startdate>20081101</startdate><enddate>20081101</enddate><creator>Yemendzhiev, H</creator><creator>Gerginova, M</creator><creator>Krastanov, A</creator><creator>Stoilova, I</creator><creator>Alexieva, Z</creator><general>Berlin/Heidelberg : Springer-Verlag</general><general>Springer-Verlag</general><general>Springer</general><general>Oxford University Press</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QR</scope><scope>7T7</scope><scope>7WY</scope><scope>7WZ</scope><scope>7X7</scope><scope>7XB</scope><scope>87Z</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FL</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BEZIV</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FRNLG</scope><scope>FYUFA</scope><scope>F~G</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K60</scope><scope>K6~</scope><scope>K9.</scope><scope>L.-</scope><scope>LK8</scope><scope>M0C</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQBIZ</scope><scope>PQBZA</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7QO</scope><scope>7X8</scope></search><sort><creationdate>20081101</creationdate><title>Growth of Trametes versicolor on phenol</title><author>Yemendzhiev, H ; Gerginova, M ; Krastanov, A ; Stoilova, I ; Alexieva, Z</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c497t-59420d1fdea44bfc28ef0da739f32c327fbd4f5cd555d628ae0cc55161c20f8a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Biochemistry</topic><topic>Biodegradation</topic><topic>Bioinformatics</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Bioremediation</topic><topic>Biotechnology</topic><topic>Carbon</topic><topic>Cellular biology</topic><topic>Coriolus versicolor</topic><topic>culture media</topic><topic>Energy sources</topic><topic>Enzymes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Fungal Proteins - genetics</topic><topic>Fungal Proteins - metabolism</topic><topic>Fungi</topic><topic>Genetic Engineering</topic><topic>Genetic testing</topic><topic>Hybridization</topic><topic>Inorganic Chemistry</topic><topic>Investigations</topic><topic>Labeling</topic><topic>Life Sciences</topic><topic>Lignin</topic><topic>microbial growth</topic><topic>microbial physiology</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Mixed Function Oxygenases - genetics</topic><topic>Mixed Function Oxygenases - metabolism</topic><topic>Original Paper</topic><topic>Phenol - metabolism</topic><topic>Phenols</topic><topic>Pollutants</topic><topic>Probes</topic><topic>Proteins</topic><topic>Studies</topic><topic>Trametes - enzymology</topic><topic>Trametes - genetics</topic><topic>Trametes - growth & development</topic><topic>Trametes - metabolism</topic><topic>Trametes versicolor</topic><topic>Trichosporon cutaneum</topic><topic>white-rot 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Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of industrial microbiology & biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yemendzhiev, H</au><au>Gerginova, M</au><au>Krastanov, A</au><au>Stoilova, I</au><au>Alexieva, Z</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Growth of Trametes versicolor on phenol</atitle><jtitle>Journal of industrial microbiology & biotechnology</jtitle><stitle>J Ind Microbiol Biotechnol</stitle><addtitle>J Ind Microbiol Biotechnol</addtitle><date>2008-11-01</date><risdate>2008</risdate><volume>35</volume><issue>11</issue><spage>1309</spage><epage>1312</epage><pages>1309-1312</pages><issn>1367-5435</issn><eissn>1476-5535</eissn><abstract>Trametes versicolor 1 was shown to grow on phenol as its sole carbon and energy source. The culture growth and degradation ability dependence on culture medium pH value was observed. The optimal pH value of a liquid Czapek salt medium was 6.5. The investigated strain utilized completely 0.5 g/l phenol in 6 days. The dynamics of the phenol degradation process was investigated. The process was characterized by specific growth rate μmax 0.33 h⁻¹, metabolic coefficient k = 4.4, yield coefficient Y x/s = 0.23 and rate of degradation Q = 0.506 h⁻¹. The intracellular activities of phenol hydroxylase (0.333 U/mg protein) and cis,cis-muconate lactonizing enzyme (0.41 U/mg protein) were demonstrated for the first time in this fungus. In an attempt to estimate the occurrence of gene sequences in T. versicolor 1 related to phenol degradation pathway a dot blot analysis with total DNA isolated from this strain was performed. Two synthetic oligonucleotides were used as hybridizing probes. One of the probes was homologous to the 5'end of phyA gene coding for phenol hydroxylase in Trichosporon cutaneum ATCC 46490. The other probe was created on the basis of cis,cis-muconate lactonizing enzyme coding gene in T. cutaneum ATCC 58094. The results of these investigations showed that T. versicolor 1 may carry genes similar to those of Trichosporon cutaneum capable to degrade phenol.</abstract><cop>Berlin/Heidelberg</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>18712560</pmid><doi>10.1007/s10295-008-0412-z</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Biochemistry Biodegradation Bioinformatics Biological and medical sciences Biomedical and Life Sciences Bioremediation Biotechnology Carbon Cellular biology Coriolus versicolor culture media Energy sources Enzymes Fundamental and applied biological sciences. Psychology Fungal Proteins - genetics Fungal Proteins - metabolism Fungi Genetic Engineering Genetic testing Hybridization Inorganic Chemistry Investigations Labeling Life Sciences Lignin microbial growth microbial physiology Microbiology Microorganisms Mixed Function Oxygenases - genetics Mixed Function Oxygenases - metabolism Original Paper Phenol - metabolism Phenols Pollutants Probes Proteins Studies Trametes - enzymology Trametes - genetics Trametes - growth & development Trametes - metabolism Trametes versicolor Trichosporon cutaneum white-rot fungi |
| title | Growth of Trametes versicolor on phenol |
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