High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil

Genes encoding key enzymes of catabolic pathways can be targeted by DNA fingerprinting to explore genetic degradation potential in pristine and polluted soils. We performed a greenhouse microcosm experiment to elucidate structural and functional bacterial diversity in polyaromatic hydrocarbon (PAH)-...

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Veröffentlicht in:	The ISME Journal 2008-09, Vol.2 (9), p.968-981
Hauptverfasser:	Sipilä, Timo P, Keskinen, Anna-Kaisa, Åkerman, Marja-Leena, Fortelius, Carola, Haahtela, Kielo, Yrjälä, Kim
Format:	Artikel
Sprache:	eng
Schlagworte:	Aromatic compounds Bacteria Bacteria - classification Bacteria - genetics Betula - microbiology Betula pendula Biodiversity Biomedical and Life Sciences Bioremediation Chromatography, High Pressure Liquid Cluster Analysis Community structure Deoxyribonucleic acid DNA DNA Fingerprinting DNA, Bacterial - genetics Ecology Evolutionary Biology Greenhouses Hydrocarbons Life Sciences Liquid chromatography Microbial Ecology Microbial Genetics and Genomics Microbiology Molecular Sequence Data original-article Oxygenases - biosynthesis Phylogeny Plant Roots - microbiology Polycyclic aromatic hydrocarbons Polycyclic Aromatic Hydrocarbons - metabolism Polymorphism, Restriction Fragment Length Pyrene Pyrenes - metabolism Rhizosphere RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sequence Homology, Amino Acid Soil Microbiology Soil pollution
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