Genome size diversity in the family Drosophilidae
Flies in the genus Drosophila have been the dominant model organisms in genetics for over a century and, with a dozen complete sequences now available, continue as such in modern comparative genomics. Surprisingly, estimates of genome size for this genus have been relatively sparse, covering less th...
Gespeichert in:
Veröffentlicht in: | Heredity 2008-09, Vol.101 (3), p.228-238 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 238 |
---|---|
container_issue | 3 |
container_start_page | 228 |
container_title | Heredity |
container_volume | 101 |
creator | Gregory, T R Johnston, J S |
description | Flies in the genus
Drosophila
have been the dominant model organisms in genetics for over a century and, with a dozen complete sequences now available, continue as such in modern comparative genomics. Surprisingly, estimates of genome size for this genus have been relatively sparse, covering less than 2% of species. Here, best practice flow cytometric genome size estimates are reported for both male and female flies from 67 species from six genera in the family Drosophilidae, including 55 species from the genus
Drosophila
. Direct and phylogenetically corrected correlation analyses indicate that genome size is positively correlated with temperature-controlled duration of development in
Drosophila
, and there is indication that genome size may be positively related to body size and sperm length in this genus. These findings may provide some explanation for the streamlined genomes found in these insects, and complement recent work demonstrating possible selective constraints on further deletion of noncoding DNA. |
doi_str_mv | 10.1038/hdy.2008.49 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_69455037</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>69455037</sourcerecordid><originalsourceid>FETCH-LOGICAL-p234t-6f1a7979888458c374c2ce7746568bf900f9f6f26718fd48b9595464d6c0c6bf3</originalsourceid><addsrcrecordid>eNqF0UtLAzEUBeAgiq3VlXsZXLhy6k0mz6VUrULBjYK7MI_EpszLyYww_npTWhHcuMrifhw4OQidY5hjSOTNuhjnBEDOqTpAU5xwFhNG4RBNAbCMgYu3CTrxfgMAiSDqGE2wZCShNJkivDR1U5nIuy8TFe7TdN71Y-TqqF-byKaVK8formt8065d6YrUnKIjm5benO3fGXp9uH9ZPMar5-XT4nYVtyG6j7nFqVBCSSkpk3kiaE5yIwTljMvMKgCrLLeECyxtQWWmmGKU04LnkPPMJjN0tcttu-ZjML7XlfO5Kcu0Ns3gNVeUsVDoX0hA0dCbB3j5B26aoatDCU2IUlJgAQFd7NGQVabQbeeqtBv1z5cFcL0DPpzqd9P9pmDQ20V0WERvF9FUJd_FwnlO</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>229987170</pqid></control><display><type>article</type><title>Genome size diversity in the family Drosophilidae</title><source>MEDLINE</source><source>SpringerLink Journals</source><source>Nature</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Gregory, T R ; Johnston, J S</creator><creatorcontrib>Gregory, T R ; Johnston, J S</creatorcontrib><description>Flies in the genus
Drosophila
have been the dominant model organisms in genetics for over a century and, with a dozen complete sequences now available, continue as such in modern comparative genomics. Surprisingly, estimates of genome size for this genus have been relatively sparse, covering less than 2% of species. Here, best practice flow cytometric genome size estimates are reported for both male and female flies from 67 species from six genera in the family Drosophilidae, including 55 species from the genus
Drosophila
. Direct and phylogenetically corrected correlation analyses indicate that genome size is positively correlated with temperature-controlled duration of development in
Drosophila
, and there is indication that genome size may be positively related to body size and sperm length in this genus. These findings may provide some explanation for the streamlined genomes found in these insects, and complement recent work demonstrating possible selective constraints on further deletion of noncoding DNA.</description><identifier>ISSN: 0018-067X</identifier><identifier>EISSN: 1365-2540</identifier><identifier>DOI: 10.1038/hdy.2008.49</identifier><identifier>PMID: 18523443</identifier><identifier>CODEN: HDTYAT</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Animals ; Biodiversity ; Biomedical and Life Sciences ; Biomedicine ; Body size ; Correlation analysis ; Cytogenetics ; Databases, Genetic ; Deoxyribonucleic acid ; DNA ; Drosophila ; Drosophila - classification ; Drosophila - genetics ; Drosophila - growth & development ; Drosophilidae ; Drosophilidae - classification ; Drosophilidae - genetics ; Drosophilidae - growth & development ; Ecology ; Evolutionary Biology ; Female ; Flow Cytometry ; Genetic Variation ; Genetics ; Genome, Insect ; Genomics ; Genotype & phenotype ; Human Genetics ; Insects ; Male ; Models, Genetic ; original-article ; Phylogeny ; Plant Genetics and Genomics ; Species Specificity ; Temperature</subject><ispartof>Heredity, 2008-09, Vol.101 (3), p.228-238</ispartof><rights>The Genetics Society 2008</rights><rights>Copyright Nature Publishing Group Sep 2008</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/hdy.2008.49$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/hdy.2008.49$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18523443$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gregory, T R</creatorcontrib><creatorcontrib>Johnston, J S</creatorcontrib><title>Genome size diversity in the family Drosophilidae</title><title>Heredity</title><addtitle>Heredity</addtitle><addtitle>Heredity (Edinb)</addtitle><description>Flies in the genus
Drosophila
have been the dominant model organisms in genetics for over a century and, with a dozen complete sequences now available, continue as such in modern comparative genomics. Surprisingly, estimates of genome size for this genus have been relatively sparse, covering less than 2% of species. Here, best practice flow cytometric genome size estimates are reported for both male and female flies from 67 species from six genera in the family Drosophilidae, including 55 species from the genus
Drosophila
. Direct and phylogenetically corrected correlation analyses indicate that genome size is positively correlated with temperature-controlled duration of development in
Drosophila
, and there is indication that genome size may be positively related to body size and sperm length in this genus. These findings may provide some explanation for the streamlined genomes found in these insects, and complement recent work demonstrating possible selective constraints on further deletion of noncoding DNA.</description><subject>Animals</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Body size</subject><subject>Correlation analysis</subject><subject>Cytogenetics</subject><subject>Databases, Genetic</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Drosophila</subject><subject>Drosophila - classification</subject><subject>Drosophila - genetics</subject><subject>Drosophila - growth & development</subject><subject>Drosophilidae</subject><subject>Drosophilidae - classification</subject><subject>Drosophilidae - genetics</subject><subject>Drosophilidae - growth & development</subject><subject>Ecology</subject><subject>Evolutionary Biology</subject><subject>Female</subject><subject>Flow Cytometry</subject><subject>Genetic Variation</subject><subject>Genetics</subject><subject>Genome, Insect</subject><subject>Genomics</subject><subject>Genotype & phenotype</subject><subject>Human Genetics</subject><subject>Insects</subject><subject>Male</subject><subject>Models, Genetic</subject><subject>original-article</subject><subject>Phylogeny</subject><subject>Plant Genetics and Genomics</subject><subject>Species Specificity</subject><subject>Temperature</subject><issn>0018-067X</issn><issn>1365-2540</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqF0UtLAzEUBeAgiq3VlXsZXLhy6k0mz6VUrULBjYK7MI_EpszLyYww_npTWhHcuMrifhw4OQidY5hjSOTNuhjnBEDOqTpAU5xwFhNG4RBNAbCMgYu3CTrxfgMAiSDqGE2wZCShNJkivDR1U5nIuy8TFe7TdN71Y-TqqF-byKaVK8formt8065d6YrUnKIjm5benO3fGXp9uH9ZPMar5-XT4nYVtyG6j7nFqVBCSSkpk3kiaE5yIwTljMvMKgCrLLeECyxtQWWmmGKU04LnkPPMJjN0tcttu-ZjML7XlfO5Kcu0Ns3gNVeUsVDoX0hA0dCbB3j5B26aoatDCU2IUlJgAQFd7NGQVabQbeeqtBv1z5cFcL0DPpzqd9P9pmDQ20V0WERvF9FUJd_FwnlO</recordid><startdate>20080901</startdate><enddate>20080901</enddate><creator>Gregory, T R</creator><creator>Johnston, J S</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20080901</creationdate><title>Genome size diversity in the family Drosophilidae</title><author>Gregory, T R ; Johnston, J S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p234t-6f1a7979888458c374c2ce7746568bf900f9f6f26718fd48b9595464d6c0c6bf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Animals</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Body size</topic><topic>Correlation analysis</topic><topic>Cytogenetics</topic><topic>Databases, Genetic</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Drosophila</topic><topic>Drosophila - classification</topic><topic>Drosophila - genetics</topic><topic>Drosophila - growth & development</topic><topic>Drosophilidae</topic><topic>Drosophilidae - classification</topic><topic>Drosophilidae - genetics</topic><topic>Drosophilidae - growth & development</topic><topic>Ecology</topic><topic>Evolutionary Biology</topic><topic>Female</topic><topic>Flow Cytometry</topic><topic>Genetic Variation</topic><topic>Genetics</topic><topic>Genome, Insect</topic><topic>Genomics</topic><topic>Genotype & phenotype</topic><topic>Human Genetics</topic><topic>Insects</topic><topic>Male</topic><topic>Models, Genetic</topic><topic>original-article</topic><topic>Phylogeny</topic><topic>Plant Genetics and Genomics</topic><topic>Species Specificity</topic><topic>Temperature</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gregory, T R</creatorcontrib><creatorcontrib>Johnston, J S</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Heredity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gregory, T R</au><au>Johnston, J S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genome size diversity in the family Drosophilidae</atitle><jtitle>Heredity</jtitle><stitle>Heredity</stitle><addtitle>Heredity (Edinb)</addtitle><date>2008-09-01</date><risdate>2008</risdate><volume>101</volume><issue>3</issue><spage>228</spage><epage>238</epage><pages>228-238</pages><issn>0018-067X</issn><eissn>1365-2540</eissn><coden>HDTYAT</coden><abstract>Flies in the genus
Drosophila
have been the dominant model organisms in genetics for over a century and, with a dozen complete sequences now available, continue as such in modern comparative genomics. Surprisingly, estimates of genome size for this genus have been relatively sparse, covering less than 2% of species. Here, best practice flow cytometric genome size estimates are reported for both male and female flies from 67 species from six genera in the family Drosophilidae, including 55 species from the genus
Drosophila
. Direct and phylogenetically corrected correlation analyses indicate that genome size is positively correlated with temperature-controlled duration of development in
Drosophila
, and there is indication that genome size may be positively related to body size and sperm length in this genus. These findings may provide some explanation for the streamlined genomes found in these insects, and complement recent work demonstrating possible selective constraints on further deletion of noncoding DNA.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>18523443</pmid><doi>10.1038/hdy.2008.49</doi><tpages>11</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0018-067X |
ispartof | Heredity, 2008-09, Vol.101 (3), p.228-238 |
issn | 0018-067X 1365-2540 |
language | eng |
recordid | cdi_proquest_miscellaneous_69455037 |
source | MEDLINE; SpringerLink Journals; Nature; EZB-FREE-00999 freely available EZB journals |
subjects | Animals Biodiversity Biomedical and Life Sciences Biomedicine Body size Correlation analysis Cytogenetics Databases, Genetic Deoxyribonucleic acid DNA Drosophila Drosophila - classification Drosophila - genetics Drosophila - growth & development Drosophilidae Drosophilidae - classification Drosophilidae - genetics Drosophilidae - growth & development Ecology Evolutionary Biology Female Flow Cytometry Genetic Variation Genetics Genome, Insect Genomics Genotype & phenotype Human Genetics Insects Male Models, Genetic original-article Phylogeny Plant Genetics and Genomics Species Specificity Temperature |
title | Genome size diversity in the family Drosophilidae |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-10T04%3A49%3A16IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Genome%20size%20diversity%20in%20the%20family%20Drosophilidae&rft.jtitle=Heredity&rft.au=Gregory,%20T%20R&rft.date=2008-09-01&rft.volume=101&rft.issue=3&rft.spage=228&rft.epage=238&rft.pages=228-238&rft.issn=0018-067X&rft.eissn=1365-2540&rft.coden=HDTYAT&rft_id=info:doi/10.1038/hdy.2008.49&rft_dat=%3Cproquest_pubme%3E69455037%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=229987170&rft_id=info:pmid/18523443&rfr_iscdi=true |